Eint024960.1
Basic Information
- Insect
- Eupithecia inturbata
- Gene Symbol
- -
- Assembly
- GCA_963662085.1
- Location
- OY759205.1:6713493-6743735[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.44 33 5.8 0.0 3 23 172 192 170 192 0.95 2 12 0.00055 0.041 15.0 1.9 1 23 294 316 294 316 0.99 3 12 2.9e-05 0.0021 19.0 0.6 1 23 322 345 322 345 0.96 4 12 1.1e-06 8.2e-05 23.5 1.3 2 23 572 593 572 593 0.97 5 12 0.0081 0.6 11.3 3.0 1 23 599 621 599 621 0.97 6 12 0.059 4.4 8.6 6.6 1 23 685 707 685 707 0.97 7 12 0.0016 0.12 13.5 0.7 1 23 743 765 743 765 0.96 8 12 0.00062 0.046 14.8 0.7 1 23 773 795 773 795 0.92 9 12 0.027 2 9.7 2.2 1 23 804 826 804 826 0.98 10 12 0.00012 0.0085 17.1 0.9 3 23 878 898 877 898 0.98 11 12 0.012 0.86 10.8 5.6 1 23 915 937 915 937 0.97 12 12 1.9e-06 0.00014 22.7 0.7 1 23 943 965 943 965 0.98
Sequence Information
- Coding Sequence
- ATGGACATAGATCCACTTAGCTACGGGCAGTACAATTCATTCCACCCTCCATTCCATCCCGAACCTACCACACATACACAGCCCAATATTACAAATACACCGCCCAATATCATAAATACACATCCCAATCTCACTAATACACCGCCCAATATCACGAATACACCAGCCAATATCTCAAATACACAGCTAAATGTCCCTCAAACCGAACCCAATACCACAAACGCACAGGAATCCCATCTTACACCTATACCATACCCTTACTATTCACAAGAGTTACCATACAACCAAATACCCAACCGTAATGAATCAACGCAACCCATCCCGAACCCTGTCAACCAATACCCGAATATGCCAGAAGAAGTGACCAATGAGATCACAGAACCAATACCCGAAGAAGAAGATATAAAACCAGACATATCGAAGATTAAACTTAAGAAACCCAAACGATTGAAAGGTAAAACAAGCAGTTATTGGAATAAGAAGATTACGGATAAagattttaagttttacggatGTGCAGTCTGTAATATTGCGTTCCAAGATCTAACCGAGCTTGATTCCCATGTAACAATACATACTAACCGAGTAACCAGCTATGATATAAGACTGCAGAATCAGAAAAAGAGGAAACGACTCAAGAaggagaaaaagaagaaaaaaaaagaagcaaaagttaaaaacgagTTTGATTTAGAAATTAAACCCGAAGATGGTTACATTGGCACGGAGAAAGTTGGTGACGTCAAACCTGACATCTCTCAGAGTGACAAGAATGACTGTGATTTtaaagaggataaaaaagaacTTAATACTGATGAGAATAAAACGGAAAAGGATTTAGCTACAGAAAAAGAAGCAACAAGTTCGAAGGATGCGGTGTACAAGTGTTTTGCTTGTAACAAGAAGTTTGCATTAagttattatctgaaaattcaTGTTCGATCTCACACTGATGAAAAACCCTACATCTGTAATTATTGTGGGCAGACGTTCATAACCGCGAGTAAACTCGGGCGCCACAACAAGCGTATCCATCTCTCTGTTCGACACCAATGTAGAATATGTTACAAGTTCTATCATAGatTCGAAGTACTTACCAAACATTTTGACCAAAAGCACGCGGACCAAAAACTAGAAGGCGAACCTTACGactACAACGCCATCCTACCATACCTAACAGATTTAGGAGATCAATTTATAGTAGAAGAAGATACCAAGAAACCTAAGTCCGAGGATATTTGGGGGGATGCCCCCCTGGAGCCTTTGGAGGCTGAGGTGACAAAGCGGTCGGATCTAGGGGCTAATCTAAGGGCTGAAATCGAGGTGCCTGCGATCGACCACCTTAAGATAGAGGTGCCTAAGCTTGAAAAGGAAGAAAAGgatattaaaaatacatacaagaTAGAAgagatcgaaataaaatgcgAGTTAGAAGAGACAGACGGCCAGGATGGTGTATCCGGCTCAGAGTTGATAGACGAGGTGTACGAGGCTGCGAGCTCTGATGATGAAGAGGCACACAAGGGTTGGAAACAAGGGCTGGGAAGTAAAGCTGTGAAGGTGGAAAGGGGGGCGGAGGCGATTAAGGAGGAAATGTCTTTCTCAGACGACGAAGAAGAATACTTCCCCCCGGGGGGCTGGGCACGCTCCCCCCCTCCCGTATCACCCCCCCGAGCCGCCTCCCCCCCTCCCAGACGTAAAGGGGGGCCGGGGGTCTGTGAGCTGTGCAACCGGACCTTTAGCAGTCGGAGCTATTTGAAAGTGCATTTAAGGACCCATACTGGTGAAAAGCCATTTGCGTGCTACATTTGCCACCGTGGATTCATAACCGCCAACAAAATGCATCGACACGTGTTAACTCATGATGAAACTTGGGTTGGCGAAAACTGCATTAAACCAGAAACACCTGATATTAAAGCGGAAGCGGAAGAAGACGATAATAGCgagaaaaaagataaaaaatcaAACAAAGTAGAAAAAGCGAAaaacaaaattctaaaaaaGTTGAACCAGAAGTTAGACCCAAAACTGAAAGGCAGTCGTAGCTGGCAACACCGCTGTGACTACTGTGATAAGAAATTCCTACACTTCGAAACGCTGCAAGTTCACAAGAAATCTCACGCGGGAGAAGAACTGATATTGAAATGTAGATACTGCCTGGAACCACAGCTCGATcagacGTCTAAAGAAGAGCATGAGCAAACCCACGCTGGACAGAAGAAGCCATATTTATGTACTCTTTGCGGTCGGAACTACAAAAACTCAGCGGCGATGATCTACCACCGCCGAAACCACAAGGCGGATTCAGAGAAGCCGTTCATCTGTGATATTTGCTCAAAGAGATTCGACTCGCACGCCAAGCTCGCCAGGCATATACCCACGCATTCCACTGaaaaATTCGTATACCGCTACGAATGCCCAGTTTGTGCCAATATGTTTCACACGCGCTGGCATGTACAAATGCATCTCAAGTCACATCAGAAGGAGGGCTTAATACTAGAAGAGAACCGCAACGCAGTCCTAGCCATGGTCCTCCAGAACGCGCGTAAGATCCCACTCGGGCCCCCCGCTGAGAACCGAGAGGCCCTCGTGGTCCCCCCGATCCCTGCGGGCGATGAGAGATCGCGGATATGTAATATATGTGGACAGGTATTCCAACACTTCTACTATTTAGAAGAGCATCTCAAAACACACGGGAATAAAATAGCTGTCACTGATTTGGAAGAAGAGGAAGAGAAGAAATACACCTGCCAGGTCTGCTCAAAATCCTTCAAGCTCCATTACTACTTAAAACTGCACAGCTTCACCCACACTAAAGAAAAACCGTTCATCTGTCAACAGTGTGGGAAGGGCTTTATTACTAAAGGGAAACTCAAACGACACCTAGAAACACATCAAGGGTTAAAGAAATACCAATGTCATGATTATAATTTTAGAGATTATGGGATAGGGGTGCCGGTGGGAATCGGGGTGTCTGGCGGTCTCGGGGTACCGTTGGGGCAGATTACTGATAATAGCATGTAG
- Protein Sequence
- MDIDPLSYGQYNSFHPPFHPEPTTHTQPNITNTPPNIINTHPNLTNTPPNITNTPANISNTQLNVPQTEPNTTNAQESHLTPIPYPYYSQELPYNQIPNRNESTQPIPNPVNQYPNMPEEVTNEITEPIPEEEDIKPDISKIKLKKPKRLKGKTSSYWNKKITDKDFKFYGCAVCNIAFQDLTELDSHVTIHTNRVTSYDIRLQNQKKRKRLKKEKKKKKKEAKVKNEFDLEIKPEDGYIGTEKVGDVKPDISQSDKNDCDFKEDKKELNTDENKTEKDLATEKEATSSKDAVYKCFACNKKFALSYYLKIHVRSHTDEKPYICNYCGQTFITASKLGRHNKRIHLSVRHQCRICYKFYHRFEVLTKHFDQKHADQKLEGEPYDYNAILPYLTDLGDQFIVEEDTKKPKSEDIWGDAPLEPLEAEVTKRSDLGANLRAEIEVPAIDHLKIEVPKLEKEEKDIKNTYKIEEIEIKCELEETDGQDGVSGSELIDEVYEAASSDDEEAHKGWKQGLGSKAVKVERGAEAIKEEMSFSDDEEEYFPPGGWARSPPPVSPPRAASPPPRRKGGPGVCELCNRTFSSRSYLKVHLRTHTGEKPFACYICHRGFITANKMHRHVLTHDETWVGENCIKPETPDIKAEAEEDDNSEKKDKKSNKVEKAKNKILKKLNQKLDPKLKGSRSWQHRCDYCDKKFLHFETLQVHKKSHAGEELILKCRYCLEPQLDQTSKEEHEQTHAGQKKPYLCTLCGRNYKNSAAMIYHRRNHKADSEKPFICDICSKRFDSHAKLARHIPTHSTEKFVYRYECPVCANMFHTRWHVQMHLKSHQKEGLILEENRNAVLAMVLQNARKIPLGPPAENREALVVPPIPAGDERSRICNICGQVFQHFYYLEEHLKTHGNKIAVTDLEEEEEKKYTCQVCSKSFKLHYYLKLHSFTHTKEKPFICQQCGKGFITKGKLKRHLETHQGLKKYQCHDYNFRDYGIGVPVGIGVSGGLGVPLGQITDNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00699474;
- 90% Identity
- -
- 80% Identity
- -