Basic Information

Insect: Eupithecia inturbata
Gene Symbol: Sall2
Assembly: GCA_963662085.1
Location: OY759190.1:6054576-6068707[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00047 0.035 15.2 0.2 2 23 147 168 146 168 0.93

2 11 0.00069 0.05 14.7 2.4 1 23 174 196 174 196 0.96

3 11 0.00039 0.028 15.5 0.1 1 23 294 316 294 316 0.98

4 11 0.48 35 5.7 0.4 2 23 323 345 322 345 0.94

5 11 0.00024 0.018 16.1 0.0 3 23 398 419 396 419 0.90

6 11 0.0049 0.36 12.0 0.6 1 23 436 458 436 459 0.93

7 11 1.1e-05 0.00082 20.3 0.2 1 23 486 508 486 508 0.98

8 11 0.00073 0.054 14.6 0.2 1 23 514 536 514 536 0.97

9 11 0.00041 0.03 15.4 0.3 1 23 542 564 542 565 0.95

10 11 0.051 3.7 8.8 0.1 1 23 580 602 580 602 0.97

11 11 0.0036 0.26 12.4 0.1 1 20 760 779 760 782 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00047	0.035	15.2	0.2	2	23	147	168	146	168	0.93
2	11	0.00069	0.05	14.7	2.4	1	23	174	196	174	196	0.96
3	11	0.00039	0.028	15.5	0.1	1	23	294	316	294	316	0.98
4	11	0.48	35	5.7	0.4	2	23	323	345	322	345	0.94
5	11	0.00024	0.018	16.1	0.0	3	23	398	419	396	419	0.90
6	11	0.0049	0.36	12.0	0.6	1	23	436	458	436	459	0.93
7	11	1.1e-05	0.00082	20.3	0.2	1	23	486	508	486	508	0.98
8	11	0.00073	0.054	14.6	0.2	1	23	514	536	514	536	0.97
9	11	0.00041	0.03	15.4	0.3	1	23	542	564	542	565	0.95
10	11	0.051	3.7	8.8	0.1	1	23	580	602	580	602	0.97
11	11	0.0036	0.26	12.4	0.1	1	20	760	779	760	782	0.94

Sequence Information

Coding Sequence: ATGGATGGTGATAGAGAATTCAACCTCCATTGGGGAGGAGGGGAAGTAGTGGTGAAGCATGACCCGGACATTGGAAATACACCATTATGTACCATTGATAATGTGCATGGTGGTTATACTAATATGACACCAGAAGAAATAATGGCGAACACTGATCAAATGGCCGCAGAGAACCTAATGTTTTTAGCTCAAGATGTCATTGGATATACTGAGACAGCAGAATTGGCAGATGATCCCAGTGTGGAGTGTGTCACTGAGGAAGTCATTACTGACGACTGGGGTGTTGACGGGGTGCCTGAGAGAGTGGATGCCCCAATAGATCACCTAGCAAACACTGTGGATCTGGGTTCCaaagatgataatgatgaactACTTATACCAGTAGATCAAGAAATAAATCTCCACGCACAAGACGAGTATACTGCAATGCGGCCGTGGCCGTGCGACTTCTGCTCACGACGTTTCCGAAAGAAGGCGGCTCTGATGAACCACATGGTAGCACATCAGAACGACAGACCGCACGCTTGCAATCTGTGCGGAGTGCGCTATGTTCGGAAATGCGATCTGATGAACCATCTGAAGGTGCATGCGTTTGTGCCTGATGATGCTGATTCTATGGACTTTGAAGAAATACTAGAAAACAACCAAATCGTGAAGCCAAAGAAAAAGCGAGGAAGGCGGAAAAAGATTCCTCCACCAGAGGAGGATGAATGGGAGAACATGACCTCAGCGCGCACACAACAATGGTCCCGCCGCGGCCGGTCGCCGGCCaagccgccgccgtcgccgccgccgatGTCGCCCCCttcgccgccgtcgccgccgtCACCACCGTCGCCGCAGTCGCCGCCGCCTCCGCCAGCTGATCCGTCGCGGCCGTTCGTTTGCATGACCTGTGGTATTGGGTTCGCGAGGGAGAAAGCTTTGAAGTCGCATTCTAGGGTCCACGGTGGAGATTCCCCGGTGGAGTGCAGCGAGTGCGGCGAACTGTGCTGGTCACGCGACGGGCTATCCAACCACATGCTGCAGAAACATCCGCTTGTAGTGCCGCGCACTACACAGGAGGCTAACTACAATGACTCTGATTCAGATGACGACATGGAGTACCGCCTATCCCCGGAATCAGCCCCCAGCGGCGGCCACGAGCGCGAGCGTCCGGTGTATGACAACACACGAGGACCCGAGCTGTTCTGTCCGGACTGTGGCGTGGCGTTTCAACGGGCCGATTTACTAAGGCGGCATGTGGCAGCGGCGCATAGTTACAAGCGGCGCGTGCGCGAGAGCGGGTCTGGCTCGTGGGGCGAGCACACATGCGAGGTGTGCGGCGAAGCATGCAGTGACGCGCTGCAGCTGCTGGCCCACGCCGAGCTGCACCACGACCGGGTCGCGCCGCCGCACAGGTTAAAAAGGCCCAAAGGACATAGTAGCACATCGATATCGTTATCTGGAAAGCAATTCCCTTGTAGGGAATGTGGCAAAGTATTTGGGTCTCGGAGTTCTCAGCAGATCCACATTCGAATCCACACGGGCGAGCGACCGTACGCTTGCCGGTTCTGTTGGAAGGCGTTCGCTGACGGCGGCACCTTGAGGAAACATGAGAGGATTCATActggtGAAAAGCCATACGCATGTGCGGTGTGCCCACGCGCGTTCAACCAACGAGTCGTTTTGAGAGAGCACGTAAGATCGCACCACTCTGCGCCGGATCGCAGGCAGCAAGCTAATGGTGGTCCAGCATATTCCTGCGTAGTTTGCTCGAGGACTTTACAAACAAGCCCGGAGTTAGTGCAGCATCTCATACAGCATTGCGACGCTAACACGGCGCTGAAGAGGCAACCTCAGAATGGACCCCGCAAATACAAGCGCCGGCGGAAGATAAAGACCGAAGTGTCCCCCGCGCGGCGCGAGTGGGCGACCCCGTCCCCCCCGCCGCAGTCCCCCTCCCCCGGCGCGTCGCCCGCGCCCTCCCCCCCGCCcgcgtcgccgccgcgccgccgctcgCGCCGGGAGCCCGTCGCTAGACCGAAGATGATACATACTTCCGAGGAAACTAGGAAGGTTAAGGTCAAGAGCGCGCGTCAGCGGCGACCACCGCGTCACCCGGCTGACGACCTCCGAGCGATCGGAAACCATCCGCCCTCGCCAAAACAAGAGCCCAAAAGTGAGGCAGATTCGCCCATACCTTCGCCAGTACCATCGCCCGTGCCTTCGCCCGTATCATCGCCCGTGCCTTCGCCCCAACATGACGAGACAGAGGAAATTGATGAAGGAGGGCCGTACAAGTGTGAAATGTGTTCGCTTGAGTTCCCGCGGCGCAGTGCGTTGCTCTTACACGTGCCTGTCCATATATGA
Protein Sequence: MDGDREFNLHWGGGEVVVKHDPDIGNTPLCTIDNVHGGYTNMTPEEIMANTDQMAAENLMFLAQDVIGYTETAELADDPSVECVTEEVITDDWGVDGVPERVDAPIDHLANTVDLGSKDDNDELLIPVDQEINLHAQDEYTAMRPWPCDFCSRRFRKKAALMNHMVAHQNDRPHACNLCGVRYVRKCDLMNHLKVHAFVPDDADSMDFEEILENNQIVKPKKKRGRRKKIPPPEEDEWENMTSARTQQWSRRGRSPAKPPPSPPPMSPPSPPSPPSPPSPQSPPPPPADPSRPFVCMTCGIGFAREKALKSHSRVHGGDSPVECSECGELCWSRDGLSNHMLQKHPLVVPRTTQEANYNDSDSDDDMEYRLSPESAPSGGHERERPVYDNTRGPELFCPDCGVAFQRADLLRRHVAAAHSYKRRVRESGSGSWGEHTCEVCGEACSDALQLLAHAELHHDRVAPPHRLKRPKGHSSTSISLSGKQFPCRECGKVFGSRSSQQIHIRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDRRQQANGGPAYSCVVCSRTLQTSPELVQHLIQHCDANTALKRQPQNGPRKYKRRRKIKTEVSPARREWATPSPPPQSPSPGASPAPSPPPASPPRRRSRREPVARPKMIHTSEETRKVKVKSARQRRPPRHPADDLRAIGNHPPSPKQEPKSEADSPIPSPVPSPVPSPVSSPVPSPQHDETEEIDEGGPYKCEMCSLEFPRRSALLLHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00703284;
90% Identity: iTF_00699484;
80% Identity: -