Eint021301.1
Basic Information
- Insect
- Eupithecia inturbata
- Gene Symbol
- -
- Assembly
- GCA_963662085.1
- Location
- OY759199.1:3536431-3538473[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0075 0.55 11.4 0.5 5 23 296 314 295 314 0.96 2 12 0.066 4.8 8.5 0.2 3 23 322 342 320 342 0.90 3 12 1.4 99 4.3 0.5 2 23 350 371 349 371 0.90 4 12 1.5e-07 1.1e-05 26.2 0.7 2 23 377 398 377 398 0.98 5 12 0.0003 0.022 15.8 2.5 1 23 404 426 404 426 0.98 6 12 0.00076 0.056 14.6 0.0 2 20 435 453 434 455 0.93 7 12 0.00071 0.052 14.6 0.1 1 23 490 513 490 513 0.96 8 12 0.0046 0.34 12.1 0.0 3 23 522 542 521 542 0.98 9 12 8.8e-05 0.0065 17.5 0.7 1 23 552 574 552 574 0.98 10 12 4.2e-05 0.0031 18.5 4.6 1 23 580 602 580 602 0.98 11 12 0.0029 0.21 12.7 0.3 3 23 610 630 608 630 0.98 12 12 0.0002 0.015 16.3 0.8 1 23 636 659 636 659 0.96
Sequence Information
- Coding Sequence
- ATGAATTCAGCTTATCAGTTCCGGAAGCAGTGCATCAAGATGGATACTGAACTGAAGACACAGCTTAACGAGCTCCTCAACCAATGTAATGACAACTACATTGATGAACTTGAAAATATGGATGAAGCAGAGAGCCAGCAGACGCAAGATGTTGAATTTGCAAATGATCCTATGAAACAACTCGAAGCAATCATCAAAAAAGAACCCATGGACAAAGATGATGACTATTATTACGTTCTAGTCATAGACAACCCTAAGGATAAGGAAAATGTAGATGATACTAACATAATGGAGccagttaaaattaaaagtgaaaaaaatgaTGACAAAGTACTTCAGATAACAGACAGTGCAGATAAACCAGACGAGCAGAGTCCTAAAAGTACTAAGTTAGTGTCACAAGTAGAAGTGACAACAATTGAGaaaaattattcagattttGAACATTCCATGGACTCGTTTCTCATAAGTAACAATGCCATCTCAGCTAATGTACCAGCTACTATTCTAGAGAATGAAGAGTGTCAGGAAGATGATGAGAATGTCAATGATATTGGTAATGACGTCACTGTGTACGAAACCAATCAAGATGTAGCTCTCTCAGAGGACAATAGCATCATCACTGATGACCAGAACTTGATAAAGATACTGACAAGTCAAGAATTCATTGAAGATGGCTCAGGAACTGTGTTTCTAAAACATGACGGTGTAAACTATATTGCTGATGGACAACTGGTGAATGATGATGACGATCAAGACGAAGAAGTTATCTATTATGAAGGTGACGGAGAATCACAGTTCCAAATTGTGAAGTATGATGGTTCCGAGTTAGTCATTGAGTACGCTGATGAGAGTAATCAAGTGAGCACCCCGAATTTCCTTTGTGACTGTGGAGAACAGTACACAGACTACAGTGAATTTGAGAAGCATCAGACAAAACACAATCCGGCCGGGGACCACCTCTGCAACTTATGTGGCAAGGGGTTTGAGTCAGAAGAAATTCTTACCGGCCACATGGTCTTACACAATGTCTCCGGGTTGCTACTCCAGTGCCCATTCTGTGAAGCAGTTATGAAGAGAAGTGCTTTGACACAGCATATCAAACACGCTCACAACCACTTTAAACCACAATGCGATGTTTGCAAAAAAACTTTTGCCAATCCCAATAATTTGAAGAGACACATGATGATCCACACTGGAGTGAAGGAATTTGAATGTGATCTCTGCTTTAAAAGGTTCAGCCAGAAAATAACCATGCAGACTCATAGACTGACTCATCTAAACCCTATCCAACCAACTCTAACATGCCCTGGGTGTGAAGTCACCTTCAAAACCAAAGATGTGCTCACACAGCACATTGAAAACAGCGAATGTCCCAAGTCCAAAGTTTTAGATACAGATGCAAAGGATGAACtgatgaaagctgtcaaaaaggAGGTCAAGACTAGCCTGGGTAAGCTCTTAGGCTATGCCTGTTCTTTGTGCAAGAGAATGTTCTCCATAGAGTCCGCTTTGGAATCCCATATCGAGTCAACTCACATTGTTGATCCAGCTGAGCTTCTCTGCTCCGAATGCGGCGAAGTTGTTAGTTCCAAGAAAGAGATGGCAGTTCATGTGATGAGCCATGACAAACGCAAAAACATTGTAAAGAGGTTTGAATGCTCGACTTGTGGTAAGGGCTGTTCTAGCCAGGCTATGTTGCTGATGCATGAGAGAGTCCACACAAATGAGAGACCATTCTCCTGCCAGCTGTGTCCtcttaaatttaaaactaaaacccaCCTACGGACACATCAATTGACTCATACGCGCGAGAAGAAGTTTGGTTGCTCTGTTTGCATGAAGTTTTTTGCTCTAAAAGGCAATTTGGTGGTACATCTACGGACTCACACTGGTGAAAGGCCTTACGTGTGCAGTGATTGTGGCGACGCCTTTATTGATTCGAAGTATTTGAAGAAGCATAAGCTAAAGAAACATGGCTCAGACAATTTGGCTTGGAATCAGTTCTTGAAAGTCAAATATGAAGATATGGATGAATCCTAG
- Protein Sequence
- MNSAYQFRKQCIKMDTELKTQLNELLNQCNDNYIDELENMDEAESQQTQDVEFANDPMKQLEAIIKKEPMDKDDDYYYVLVIDNPKDKENVDDTNIMEPVKIKSEKNDDKVLQITDSADKPDEQSPKSTKLVSQVEVTTIEKNYSDFEHSMDSFLISNNAISANVPATILENEECQEDDENVNDIGNDVTVYETNQDVALSEDNSIITDDQNLIKILTSQEFIEDGSGTVFLKHDGVNYIADGQLVNDDDDQDEEVIYYEGDGESQFQIVKYDGSELVIEYADESNQVSTPNFLCDCGEQYTDYSEFEKHQTKHNPAGDHLCNLCGKGFESEEILTGHMVLHNVSGLLLQCPFCEAVMKRSALTQHIKHAHNHFKPQCDVCKKTFANPNNLKRHMMIHTGVKEFECDLCFKRFSQKITMQTHRLTHLNPIQPTLTCPGCEVTFKTKDVLTQHIENSECPKSKVLDTDAKDELMKAVKKEVKTSLGKLLGYACSLCKRMFSIESALESHIESTHIVDPAELLCSECGEVVSSKKEMAVHVMSHDKRKNIVKRFECSTCGKGCSSQAMLLMHERVHTNERPFSCQLCPLKFKTKTHLRTHQLTHTREKKFGCSVCMKFFALKGNLVVHLRTHTGERPYVCSDCGDAFIDSKYLKKHKLKKHGSDNLAWNQFLKVKYEDMDES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00698534;
- 90% Identity
- iTF_00698534;
- 80% Identity
- -