Eint020068.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupithecia inturbata
Gene Symbol
-
Assembly
GCA_963662085.1
Location
OY759197.1:5945667-5964890[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.00012 0.0085 17.1 7.2 1 23 196 218 196 218 0.97
2 13 2.5e-06 0.00018 22.4 0.3 2 23 231 252 231 252 0.97
3 13 5.9e-05 0.0043 18.0 2.1 2 23 261 282 261 282 0.98
4 13 0.0014 0.1 13.7 4.0 1 23 288 310 288 310 0.97
5 13 1e-05 0.00077 20.4 1.3 1 23 316 338 316 338 0.97
6 13 1.8e-05 0.0014 19.6 8.6 2 23 345 366 344 366 0.97
7 13 0.00013 0.0093 17.0 0.8 1 23 372 394 372 394 0.97
8 13 1.2e-05 0.00091 20.2 1.6 1 23 400 422 400 422 0.99
9 13 0.00016 0.012 16.7 0.4 1 23 428 450 428 450 0.96
10 13 0.0015 0.11 13.6 0.8 1 23 456 478 456 478 0.96
11 13 9e-05 0.0066 17.5 0.2 1 23 484 506 484 506 0.98
12 13 0.00093 0.068 14.3 2.7 1 23 512 534 512 534 0.98
13 13 0.00025 0.018 16.1 3.0 1 23 606 628 606 628 0.99

Sequence Information

Coding Sequence
ATGGCTGGAATTAAAGTGAATATGGCACCCAAATTACGGAATTTGAAGTTCGACAAGATTTGTAGAGCATGTTTGGAAGTGAAGAGGGACATGAGACCATTGTTCGAACAGCTGACCGCAACGATGCTGATGGGTATTTCGAAAGTAGAGGTTTCAATGGGAGACGGTTTACCACCGCAGCTGTGTCTACAGTGCGTGCATCAGATCTCGCGCTGCCACGCCTTCAAGGACCTCGTCGAGAGGAATGACGTCACGCTGAGAGAACACGCCGCGTGGCTCGCTGAGGAGGCGATGAAGAGAGAAAGAGAAGAGAAAGAGAAGGAGCTGCTAAACATGGCATGCGCCGACAACTACATGCAATACATGGAAGTGCCGCTGACCAACCCCAATCAGCTGCTTGATGGCTTCTTCTCGCCCACTTCGGCACAGGACAACAAGGCGGACCCGGAGGCCAAGCCAGAGGAAGAGAAGACAGAAACAGTCGCTGCCACAGACAAACCCGAAGAGGAAACGACGAACTCTGACGATGAGAACTACATGCAACTCGTGGTCTTCCAAGCCACATCGTCTGTCTCTCCCGGAAGACACGTCTGCAACCTCTGCCATAAGGAGTTCAAACACGCCAGGTGGCTGAAGCAGCATATGCGTTACCACACTAACTGGATCAAGGCGAATTGCAAGAAGCCTCCAAGCTGCCCTATCTGTGAAAGAACCTTTAAGGGTCCAGGAATGCTAAAGATGCATATGCGAACGCATGAACAGCGTCCTGCAAAGCAGCCGACTTGCTCCGTCTGCCAACGGACCTTCCCAACGAAGACGCTCCTTTACAGACATCGTCAGACGCACTTCGAGCAGAAAACTCACCACTGCACGGTCTGCGATAAACGTTTCTTTAGCGGATACGCTTTACGGTCGCATATGGCTCGTCATAGAGGAGAAAGGCCGTATATCTGCTCGAATTGCAATAAAAGCTTCTACAATCCTACTGATCTGAAGGTCCACTTCCGCCTGCACACCGGCGAGAAGCCCCTTAAATGCACGGAATGCAACAAGACCTTCCGGCGCCACTCCACCCTCTGCCAGCACATGAAGAAACACCGCGGCATACGGAACCACATCTGCAGTGTCTGTACCAAGGGGTTCTATGAGGTGTCGAAGCTTAATGCTCACATGAGAGTGCATACTGGCGAGCGTCCCTACGAGTGCCAGTTCTGTTCGCGCCGCTTCGCCCAGCAGTCCGCCCTGATCTACCACCGCCGCACGCACACGGGAGAGAAGCCTTATCTCTGCAAGATTTGCCCCGCCAAGTTTACTACATCCTCTGCAAGGAATAATCATATACTGACGCATACGGGCGGGAAAAGGTTCGTCTGCCCAATCTGCTTAAAAGGCTGCTCGACGCGCGCCGAGCTTCGAATCCACAACACCAAGCACACCGGAGAGAAACTATTCGAGTGCGAGATCTGTGCGCAACAGTTCAGCTCGGCGTCTTACTTGGCCGTGCATCGCCGGTACCACATGGGGGAGAAGAAATACAACTGCAGTACATGCGGGAAAGGATACATGGATTCAAAATCATACAGTAAGCACAAGAAAACTCACGAAGCGAAGTCCGAAGGCGAGTCATCGAACTCTGAAAACGGACAGGAACAACCGAACTCCAAACAAGAAACCCAGGCGGACGTAACTCAAGCGGGGAGTGAGGAGCAAGCGGAATCTAACGTGGCTCAAGAAGCGCCGACCCAACCGCAGCCGCAGGACACCACACTGTCAGTCCGCAGCGCACCCACGCTGCAGGCGACAGCGCCCAAGAAGTTCAAGTGTGGGGTGTGCGTCAAGTCGTACATGTACCTGCACAGCCTCAAGAAACACATGTTGACGCACATGCAGCAGCAAAATCAACAGCAAAATcaacagcagcagcagcagcagcagcagcaacaGCAACAGCAACAACAAcagcaacaacaacaacaacaacaacaacaacatcaACAACAACATCAGCAGCAACAACAAATCCAGCCGACACAACAACAAGTGCAGGTGCAACAGGTACAGCAACACATGCACCAGCAACAATTGCATCAACACATGCAACAGCAGCAGTTGCAGCAACAAGTGTTGCAGGTCAGCGGTGTACAGCAACTCACTGTGCCTATACACCAGCAGTTGCCGCAGAGCATTACTGTCAGTGGAGTGCAGTCTGGCCAACACACCTACCCGGTGATATCCTCGGTGCAATCGCTGCAGCTGCAACAGACGCAACAGGTTAACACgCAGCAACCGCAGCAACTTCACGTGCAAACCATCCAGATTCATCCGCAGCAGCAACATCAGCCGATACAGATACATGCGGTTGGAGTACAACAAGTTCAACAACAACAACTGCATGTCGCGACTTCTTCCTGTCAAACCATGCTGCCTAACATTCTGCAGCTGCAGCCAGCGACTGTGGTGTCGGGTCTAAGCCAGCAAGACTTGGGAGGCGTGGCGCACCGCATCATTCTACAACAGCAACCGCAGCAGACGCACCCTCAAGTTTACACTATCCATCACTAA
Protein Sequence
MAGIKVNMAPKLRNLKFDKICRACLEVKRDMRPLFEQLTATMLMGISKVEVSMGDGLPPQLCLQCVHQISRCHAFKDLVERNDVTLREHAAWLAEEAMKREREEKEKELLNMACADNYMQYMEVPLTNPNQLLDGFFSPTSAQDNKADPEAKPEEEKTETVAATDKPEEETTNSDDENYMQLVVFQATSSVSPGRHVCNLCHKEFKHARWLKQHMRYHTNWIKANCKKPPSCPICERTFKGPGMLKMHMRTHEQRPAKQPTCSVCQRTFPTKTLLYRHRQTHFEQKTHHCTVCDKRFFSGYALRSHMARHRGERPYICSNCNKSFYNPTDLKVHFRLHTGEKPLKCTECNKTFRRHSTLCQHMKKHRGIRNHICSVCTKGFYEVSKLNAHMRVHTGERPYECQFCSRRFAQQSALIYHRRTHTGEKPYLCKICPAKFTTSSARNNHILTHTGGKRFVCPICLKGCSTRAELRIHNTKHTGEKLFECEICAQQFSSASYLAVHRRYHMGEKKYNCSTCGKGYMDSKSYSKHKKTHEAKSEGESSNSENGQEQPNSKQETQADVTQAGSEEQAESNVAQEAPTQPQPQDTTLSVRSAPTLQATAPKKFKCGVCVKSYMYLHSLKKHMLTHMQQQNQQQNQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQHQQQQQIQPTQQQVQVQQVQQHMHQQQLHQHMQQQQLQQQVLQVSGVQQLTVPIHQQLPQSITVSGVQSGQHTYPVISSVQSLQLQQTQQVNTQQPQQLHVQTIQIHPQQQHQPIQIHAVGVQQVQQQQLHVATSSCQTMLPNILQLQPATVVSGLSQQDLGGVAHRIILQQQPQQTHPQVYTIHH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00705316;
90% Identity
iTF_00704258;
80% Identity
-