Eint024461.1
Basic Information
- Insect
- Eupithecia inturbata
- Gene Symbol
- -
- Assembly
- GCA_963662085.1
- Location
- OY759205.1:1378844-1381714[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.066 4.8 8.5 0.6 1 23 33 56 33 56 0.93 2 19 0.012 0.91 10.7 0.5 3 23 88 109 86 109 0.94 3 19 0.2 14 6.9 0.7 2 23 132 154 132 154 0.95 4 19 0.0025 0.18 12.9 2.7 1 23 159 182 159 182 0.97 5 19 0.95 70 4.8 0.1 1 23 187 210 187 210 0.89 6 19 0.00023 0.017 16.2 1.0 1 23 215 238 215 238 0.94 7 19 0.00021 0.015 16.3 0.4 2 23 246 268 245 268 0.97 8 19 0.087 6.4 8.1 0.0 2 23 275 296 274 296 0.96 9 19 3.3e-07 2.4e-05 25.1 0.6 1 23 302 324 302 324 0.96 10 19 2.5e-06 0.00018 22.4 1.7 1 23 330 353 330 353 0.95 11 19 4.6 3.4e+02 2.6 1.3 1 23 458 479 458 479 0.88 12 19 0.046 3.4 8.9 0.9 3 23 556 576 554 577 0.93 13 19 0.00014 0.01 16.9 3.0 1 23 582 605 582 605 0.95 14 19 0.15 11 7.3 4.8 1 23 608 631 608 631 0.94 15 19 0.0018 0.13 13.4 0.7 1 23 637 660 637 660 0.94 16 19 0.004 0.29 12.3 0.6 2 23 668 690 667 690 0.95 17 19 0.04 2.9 9.1 0.6 1 23 695 717 695 717 0.98 18 19 2.6e-07 1.9e-05 25.4 0.3 1 23 723 745 723 745 0.98 19 19 0.0082 0.6 11.3 0.2 2 23 752 774 752 774 0.92
Sequence Information
- Coding Sequence
- ATGGAAGTTGCGCGTAAGTTGCTAATAAAACGGCGTAATGTCGAGTACATTCTACAGTATAGCAACGTAACTCCGTTCACGTGGCACAAGTCCAAATACAAATGCTTCTACTGCTCAGAAGTTATGAAAGACCCCGGTTTTCTGAGACAACACACCGCTGAGAAGCACGCGGATGCCAACCTAGAGCTAATAATTTACGATAGAACAAACAGCAATAGGAATAAAGACGCAGCGATCAAGATAGATGTCACTGACATATGTTGCAAGCTCTGTCCTCAATCTCTGAACTCACTGGAAGAACTTATACATCACATCATCATAGCTCATGATGCTGAGTATAACGTTAATATCCCGAACTGTGTGCTTCCTTTTAAACTGGATAGGGACGCCCCTACTTGCGCCACGTGTGATTCTAAATTTGCCTTCTTTGAGTATCTGTTGCGACACGCGAATAAATACCACCTCTCCCACCAATTCGTCTGCGATGTCTGTGGAACTAGCTTCCAAGGGGAAATCCACTTAAAAATGCATCATAGATACTACCACCGCGAAGGCGGCTACATCTGCGACACATGTGGCATCAGTCTCGCTACGATATCTAAGAAAATCTTACATGAAAAGAACGTTCACAATGTTAATCTCTACACTTGCCCGCACTGTCCGGAAACCTTCAAAAGCCCGTATCTAAAGAAGCTTCATCTAGCCAACGATCACGGGGTCGAGGAGCTCAAAATCAAGTGCCCGTATTGCTTCAAAGTGTTCCCGCAGGAAAGCATAATGTCGAGGCATATGAGGCGAGTTCATTTACGAGAAAAGAATGTTGAGTGTGGCGTCTGCGGAGACAAATTCTTTGGCCCCTACGATGTGAAACTTCACATGCTTAAACATAATGGAGATAAGAAATTCGTCTGCACAGTTTGCGGAAAGAAATTCGCCAAAAAGAGCAACCTTAACTCTCACATGGTCTTGCATACGAGAGAAAAGAACTTCTTGTGTGAAATTTGCGACAGATCCTTTGCGCATCAAGCGACTTTAAAGATGCATATGCGAAGCCGACATCAGCATAACATTGACTTCAAGAATGACGTTGAAGGTATAGGGATTGAAGAGGAGAGGATAGAGTATGATGACGAACTGaagaatgatgatgaagaagagGGGAAAGAGCTTCAGGATCAGAACATTGAAGTGATTGAGGGATTGAATGATGACGAGATCACTGAGCTTATACAGCAGGGGGGTTTAGAGGTACAGGTGCACAGTAGCAACACACAGGGCAGTTATCTGGACCGACTTGGTATACTCAGACGCAACATTTTCACCATCCTCCGCTACTCAAACGTTACCCCTTTCAATTGGAACACCAAAGGCTTTCGTTGCTTCTACTGCTCAAAGCAGTTGCCAGAATCCAATATCAAAGAACACACAGACAAACATAACGCCGTAGACTTGGATAGTTTCCTCAAAACGCATGTTATTACTAAAGATATACCAGTCAAAATTGACATAACAAATCTTGCTTGCAATTTCTGCCCTGAAACCCCCATTGCGTCTTTAGATGAAATGGTATCACATATAGTTGAAAACCACAACGAATTTTATGATACTGAGACGGAACTATGCTTCTTCCCTTTTCTTCTCAAGAAAGATAACAATATAATGAATTGCGTGTTATGTGAGACAGAGTTTGACAACTTTCCGTCCCTTATAACGCATATGTACAAGCACCATGTTACACACTCGTTTATATGCCAAGTATGTGGCCACAGCTTCAAAGATCAAGTACGCTTGAACAGGCATATCACTGTTTGTCACATCGGCCACCGCTGCACGGTCTGCGACAAAATCTTCGACGCATACCATAAATTAGATAAACATAAGGAGAAATTCCACGGGCATGTCAAAACTTACGATTGTAATCTCTGCACTGACAGTTTCAAAAGCAACTATCAACTCAGAGTTCATCTAGGGAAGGTCCACAACGTCCAGAAATATAGGATTAAATGCGAACAATGCGACAAAATTTGTACAACCAAAGGCGCTATGGTCTTGCATGTCCAAAGCCTGCATTCAGATATCAGATACCAGTGTGATGAGTGCGATTATACGACAGGTATCAAATGGCTGGTTAAGCTCCACAAGCGTAAGCACACAGCGATCAAGGATTATTCGTGTAGTGTGTGCGAGAGGGCGTTCGGTCGGTCCAGTAATCTGAGAGCTCATATGAAAGTCCACGTGGGTGTTTTTGGTAGAGTCTGTCGGTTCTGTAGAAAGGGGTTTACTGATGCTGAGGGTTTGCGGAGTCATGAGCAGGAGATACATTATTATGATTACTTCtag
- Protein Sequence
- MEVARKLLIKRRNVEYILQYSNVTPFTWHKSKYKCFYCSEVMKDPGFLRQHTAEKHADANLELIIYDRTNSNRNKDAAIKIDVTDICCKLCPQSLNSLEELIHHIIIAHDAEYNVNIPNCVLPFKLDRDAPTCATCDSKFAFFEYLLRHANKYHLSHQFVCDVCGTSFQGEIHLKMHHRYYHREGGYICDTCGISLATISKKILHEKNVHNVNLYTCPHCPETFKSPYLKKLHLANDHGVEELKIKCPYCFKVFPQESIMSRHMRRVHLREKNVECGVCGDKFFGPYDVKLHMLKHNGDKKFVCTVCGKKFAKKSNLNSHMVLHTREKNFLCEICDRSFAHQATLKMHMRSRHQHNIDFKNDVEGIGIEEERIEYDDELKNDDEEEGKELQDQNIEVIEGLNDDEITELIQQGGLEVQVHSSNTQGSYLDRLGILRRNIFTILRYSNVTPFNWNTKGFRCFYCSKQLPESNIKEHTDKHNAVDLDSFLKTHVITKDIPVKIDITNLACNFCPETPIASLDEMVSHIVENHNEFYDTETELCFFPFLLKKDNNIMNCVLCETEFDNFPSLITHMYKHHVTHSFICQVCGHSFKDQVRLNRHITVCHIGHRCTVCDKIFDAYHKLDKHKEKFHGHVKTYDCNLCTDSFKSNYQLRVHLGKVHNVQKYRIKCEQCDKICTTKGAMVLHVQSLHSDIRYQCDECDYTTGIKWLVKLHKRKHTAIKDYSCSVCERAFGRSSNLRAHMKVHVGVFGRVCRFCRKGFTDAEGLRSHEQEIHYYDYF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -