Eint024564.1
Basic Information
- Insect
- Eupithecia inturbata
- Gene Symbol
- -
- Assembly
- GCA_963662085.1
- Location
- OY759205.1:2839634-2845243[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 33 0.024 1.8 9.8 0.1 2 23 44 66 43 66 0.94 2 33 0.0024 0.17 13.0 0.6 1 23 88 110 88 110 0.99 3 33 0.014 1 10.6 1.4 1 23 114 136 114 136 0.97 4 33 0.12 9.1 7.6 0.2 2 23 142 164 141 164 0.93 5 33 0.19 14 7.0 3.0 1 23 170 193 170 193 0.96 6 33 0.002 0.15 13.2 2.1 1 21 199 219 199 222 0.96 7 33 0.0011 0.079 14.1 0.3 1 23 228 251 228 251 0.95 8 33 0.044 3.2 9.0 0.1 1 23 304 326 304 326 0.94 9 33 0.024 1.8 9.8 0.1 2 23 355 377 354 377 0.94 10 33 0.0024 0.17 13.0 0.6 1 23 399 421 399 421 0.99 11 33 0.016 1.2 10.4 1.1 1 23 425 447 425 447 0.97 12 33 0.12 9.1 7.6 0.2 2 23 453 475 452 475 0.93 13 33 0.73 54 5.2 3.3 1 23 481 504 481 504 0.96 14 33 0.002 0.15 13.2 2.1 1 21 510 530 510 533 0.96 15 33 0.0011 0.079 14.1 0.3 1 23 539 562 539 562 0.95 16 33 0.02 1.4 10.1 0.4 1 23 630 653 630 653 0.92 17 33 0.17 12 7.2 0.8 2 23 684 706 683 706 0.92 18 33 0.0012 0.086 14.0 1.4 1 23 728 750 728 750 0.99 19 33 0.15 11 7.3 0.7 1 23 754 776 754 776 0.90 20 33 0.0009 0.066 14.3 0.3 1 23 781 804 781 804 0.89 21 33 0.00091 0.067 14.3 1.9 1 23 810 833 810 833 0.96 22 33 0.0016 0.12 13.5 3.2 1 23 840 863 840 863 0.97 23 33 6.4e-05 0.0047 17.9 0.2 3 23 871 891 870 891 0.99 24 33 5.6e-07 4.1e-05 24.4 1.2 1 23 897 919 897 919 0.99 25 33 0.1 7.5 7.8 1.6 1 12 925 936 925 938 0.90 26 33 0.096 7 7.9 0.2 1 23 1056 1078 1056 1078 0.97 27 33 2.1 1.5e+02 3.7 0.1 1 23 1150 1172 1150 1172 0.90 28 33 0.0012 0.085 14.0 0.2 1 23 1176 1198 1176 1198 0.98 29 33 0.034 2.5 9.4 1.3 1 23 1203 1226 1203 1226 0.95 30 33 0.013 0.97 10.6 0.4 2 23 1233 1255 1233 1255 0.93 31 33 0.0036 0.26 12.4 6.1 1 23 1262 1285 1262 1285 0.97 32 33 5.6e-05 0.0041 18.1 0.7 2 23 1292 1313 1291 1313 0.96 33 33 5.9e-05 0.0043 18.0 0.6 1 23 1319 1341 1319 1341 0.99
Sequence Information
- Coding Sequence
- ATGTACCCCGACCCCGCTAAGCTTAGAGAACACAACTTAGAACACCAGAACAAAAACCTCGCCGAGATAAAAAAAGCCTTGTTTAAAATAACCAGAGTCGAACTTCTTAAAGCAGACGTAACTGATGTAAGCTGCAAGCTTTGCAACACGCCCTTTGATAAGGTTGATGATCTTGTAAACCACCTGAATGGAACACATAAAAAGAATATCAAGCCTATTCCCAATTTCGGCTTCATTCCTTTTAAGAACCAATTAGAGGACTATAGATGCGGAATTTGCGATGAAAAATTCCAAGAATACGTTTTTTTGAGATATCACATGAACGTTCATTTTCCAACTTTTGTTTGCGATCAATGCGGAAAAGGCTACATCTCTACGCTCATGCTGAATACTCACAAGCACTCGCACGAAAAAGGATATTGGCCTTGCGATGCGTGCGATAAAGTATACAACTCAATCTATTCGAAGAAGAGACACTACGCAAGAGTCCACAAAAAGGCCAATTCACATAGCTGTGTATACTGTACTGAGAAGTTCCCTGGTTACTACCATAAACTGAAACACATGGCTACGGCCCATGGAATCAAAAAGGAGTATAAATGTGATCTATGCCCACATGTCGCAAGTCGGAAAGGGAATTTAACCGTTCATATTAGATGCAAGCATCTGAATGATAAACGGTTTGTCTGCGAGATATGTGGCGCTAAGTTCTTCTCAAGAAGCGAGCTTGTGAAACAACACATGGTGAAACATACTGTGGGAAGGAGCTTTGAATGTGTTGATGAGCCCCCCAGAAAAATTACACAATCGAAGACACCGGAGCAGGATCAAAACGAAGAGCGGCGTTTGAACCTCTTAATACTCCTAGAAAGTTCCAGAATCTGCCCCTACAGATGGAAAAGGAAATGTTTCGTTTGTCTTTATTGTGACAATATGTACCCCGACCCCGCTAAGCTTAGAGAACACAACTTAGAACACCAGAACAAAAATCTCGCCGAGATAAAAAAAGCTTTGTTTAAAATAACCAGAATCGAACTTCTTAAAGCAGACGTAACTGATGTAAGCTGTAAGCTTTGCAATACACCCTTTGATAAGGTTGATGATCTTGTAAACCACCTGAATGGAACACATAAGAAGAATATCAAGCCCATTCCCAATTTCGGCTTCATTCCTTTTAAGAACCAATTAGATGACTATAGATGCGGAATTTGCGATGAAAAATTCCAAGAATACGTTTTTTTGAGATATCACATGAACGTTCATTTTCCAACTTTCGTATGCGATCAATGCGGAAAAGGCTACATTTCTGCGCTCAGGCTGAATACTCACAAGCACTCGCACGAAAAAGGATATTGGCCTTGCGATGCGTGCGATAAAGTATACAATTCAATCTATTCGAAGAAGAGACACTACGCAAGAGTCCACAAGAAGGCCAATTCACATAGCTGTCTATACTGTACTGAGAAGTTCCCTGGTTACTACCATAGGCTGAAACACTTGGCTACGGTCCATGGAATCAAAAAGGAGTATAAATGTGATCTATGCCCACATGTCGCAAGTCGGAAAGGGAATTTAACCGTTCATATTAGATGCAAGCATCTGAATGATAAGCGGTTTGTCTGCGAGATATGTGGTGCTAAGTTCTTCTCAAGGAGCGAGCTTGTGAAACAACACATGGTGAAACATACTGTGGGGAGAAGCTTTGTATgtGTTGATGAGCACACTCCACACGAGAATAAAGAAGACACACTCACtcaaaacaatacagaaatgcAAACACTGACCGTAGTTAATAAAACAGACCCTGAGGAGCAATCCAGGAAGGATAGCGTCATGACGCTTCTAGAATGTTCTAGAATATGCCCTTTCAAATGGGCGAAAAACTTATACTTCTGTATTTACTGCGAAGAATCATTCGGTGACCCCGCAAAACTGCGTAAGCACACATTCACAGAACACGACAATATTCGACCAGAAGAGATTAAACAGAGATTGATATTAATCGGAAGAAAAAGGCACGAGTTCCTTAAAACAGACATCACAGATCTTAGCTGTAAACTTTGCGATGCACATATAATCTCACTGGACCATCTCAAAGCACATCTCATTGAAAAACACAAAAAGCAAATCAACCTAAAATCCCACCTTGGGATACTCCCGTTCAGAATCAACGTAGACGATTACAAATGTGTCATTTGCGATGAAAAATACGGAGAATACAAGACTTTAAACCATCACATGAACGTTCATTTTCAGAACTTCATTTGTGAACAATGCGGTTCTGGTTTCATAACTCCCGCACGGTTACGGGTCCACTGCTTCACCCACGAAACCGGTTCCTTTCCCTGCAGCGATTGTAACAAAGTCTTTCGCTCCAGCAACGCAAATAAAGAACACTACGCCGACGTACACTTGAAGGTTAAAAGACACAGATGCCCTCAATGCCCTGAGACATTCAGAAACTACTTTCAAAGAACAAAGCACATATCTATCGCTCACGGGGTCAAGTTGAAAGAATTTAAGTGTGAATACTGCCCTAAAGTTTTTCACTATAGCGGGAAAATGACTGGCCACATTCGACATGCGCATCTAAAAGAAAAGCGGCATGGTTGTGACATGTGCGACTGGAAATTTTACTCCGCGTATGAATTGAAACAGCATATGATAAAACACGGTGGAGAGAGAAAGTATCAGTGCAATGTCTGCAAGAAAGCGTATGCAAGGAAGTATACCCTCCGAGAACACATGAGGATACATGAGAATGATAGAAGATTTGTTTGCACGGTTTGCGGAAAGTCGTTTGTGCAGGCGTGTAGAAGCCAAATAGCTGCGACGAAGCAAACGAGAGTTGTGCCACTCTTCCAAGTGGCTTACGATCGCAGCCTCTGCAAACCTCTCGGAACGGTATCAGACTTCAGTAAACTGCAAAGAACACAGAATACCTCACTCTCAGACGCTATTGCGTACGAAAACTCTCGAAGCCCATCGCCAGCTTGTCCCAGAACCCCATCACCGTACGCTCCCGAAGAAGAAACTGATATCAATCCACCGGCGAAGTATCTACTGAAACAACAACCTACGAGAAAGGTCTCCGATTGCAGACAGAACGCTCTTATAGTCTTCGAATACTCCACCGCATACCCTTTCATATTCTCAAACAACAGCTACAGATGCTTTGTCTGCTCTGAATCGTATTTAGACGTTCCGAACCTTAAGATCCACATGTCGGAACACCCTTTCGCTCATATCAAACGACTAATGAACAACAGAAAGGAGAATGTTCTTAAAGTTGATGTCAGCGAACTGACTTGCAAACTCTGCATGCTGCCTATGAGAGATTTAGTCATATTGAAGCATCATCTTAAAAACGAGCACAATAAGACGATAGATACGGAGCTGCAAGACAACCTGGTGCCTTACGATTTGACCATACATGGTCCTGAGGGGTACCAGTGCGTTGTTTGCGAGCAAAACTTCATTAAAGTCCGTATTCTCGTTATACACATGAGCGATCACTTCAGCAACTATAGCTGTGAAGTCTGCGGATCAGGTTTCATGACACTACGGTTGCTAAAGAAACACCTGGAAGTCCACGAGACGGGAAATTTCCCTTGCGATCGTTGCAGCAAAATATTCAGCACTACGCACAAAAGGGCTTTGCATATCCGCGGGGTTCACATGAAACTGTGCCCGCGGCGATGTCCCATGTGTCCAGAGCGATTCAACTCTAACTACAAACGTACAATACACCTCCAAGACGTGCATAATCAATCCACTAGAGTCCATAAATGTAAGACGTGCGGTCGAGGTTTCCACCTCAAGTATCATTTGATAAGCCACGTCCGTTCCGTGCATCTGCAAGAGCGGAATCAACAGTGCGATGTGTGTCTACAACGGTTTTCTAATAAAGAGTCCCTGAAGCGACATATGGTGGTTCATACCGGAGAAAAGAACTATAAATGTGAAGTTTGTGGAATGGCATTCTTGAGACGGAAGAATTTGAAGGACCACTTACGGTTGCATGAAATTCATTGA
- Protein Sequence
- MYPDPAKLREHNLEHQNKNLAEIKKALFKITRVELLKADVTDVSCKLCNTPFDKVDDLVNHLNGTHKKNIKPIPNFGFIPFKNQLEDYRCGICDEKFQEYVFLRYHMNVHFPTFVCDQCGKGYISTLMLNTHKHSHEKGYWPCDACDKVYNSIYSKKRHYARVHKKANSHSCVYCTEKFPGYYHKLKHMATAHGIKKEYKCDLCPHVASRKGNLTVHIRCKHLNDKRFVCEICGAKFFSRSELVKQHMVKHTVGRSFECVDEPPRKITQSKTPEQDQNEERRLNLLILLESSRICPYRWKRKCFVCLYCDNMYPDPAKLREHNLEHQNKNLAEIKKALFKITRIELLKADVTDVSCKLCNTPFDKVDDLVNHLNGTHKKNIKPIPNFGFIPFKNQLDDYRCGICDEKFQEYVFLRYHMNVHFPTFVCDQCGKGYISALRLNTHKHSHEKGYWPCDACDKVYNSIYSKKRHYARVHKKANSHSCLYCTEKFPGYYHRLKHLATVHGIKKEYKCDLCPHVASRKGNLTVHIRCKHLNDKRFVCEICGAKFFSRSELVKQHMVKHTVGRSFVCVDEHTPHENKEDTLTQNNTEMQTLTVVNKTDPEEQSRKDSVMTLLECSRICPFKWAKNLYFCIYCEESFGDPAKLRKHTFTEHDNIRPEEIKQRLILIGRKRHEFLKTDITDLSCKLCDAHIISLDHLKAHLIEKHKKQINLKSHLGILPFRINVDDYKCVICDEKYGEYKTLNHHMNVHFQNFICEQCGSGFITPARLRVHCFTHETGSFPCSDCNKVFRSSNANKEHYADVHLKVKRHRCPQCPETFRNYFQRTKHISIAHGVKLKEFKCEYCPKVFHYSGKMTGHIRHAHLKEKRHGCDMCDWKFYSAYELKQHMIKHGGERKYQCNVCKKAYARKYTLREHMRIHENDRRFVCTVCGKSFVQACRSQIAATKQTRVVPLFQVAYDRSLCKPLGTVSDFSKLQRTQNTSLSDAIAYENSRSPSPACPRTPSPYAPEEETDINPPAKYLLKQQPTRKVSDCRQNALIVFEYSTAYPFIFSNNSYRCFVCSESYLDVPNLKIHMSEHPFAHIKRLMNNRKENVLKVDVSELTCKLCMLPMRDLVILKHHLKNEHNKTIDTELQDNLVPYDLTIHGPEGYQCVVCEQNFIKVRILVIHMSDHFSNYSCEVCGSGFMTLRLLKKHLEVHETGNFPCDRCSKIFSTTHKRALHIRGVHMKLCPRRCPMCPERFNSNYKRTIHLQDVHNQSTRVHKCKTCGRGFHLKYHLISHVRSVHLQERNQQCDVCLQRFSNKESLKRHMVVHTGEKNYKCEVCGMAFLRRKNLKDHLRLHEIH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -