Basic Information

Gene Symbol
CAMTA1
Assembly
GCA_963662085.1
Location
OY759190.1:1749936-1758493[+]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8e-22 2.2e-17 63.4 0.6 32 79 12 58 4 71 0.93

Sequence Information

Coding Sequence
ATGAGGATAAACTATCAGAATATTTGGGTAGACCAGTGGCCAAAAAGCGGCTCGATGCTGCTGTACAGCCGGAAGAAAGTCCGCTACAGGAGGGACGGGTACTGCTGGAAGAAACGCAAGGATGGGAAGACTACGCGTGAAGACCACATGAAGCTGAAGGTCCAGGGCACAGAGGGCAAACCTCATCAAAGTTCTATTAAAATCACTCTCGCTTCCTCCCCCGCTACTGCCTACAACTTGCCATCCGTTAACAAGAGGCACGCAACACCGTCACTTGTTTATGTGCAAAAACTACCACGTAAACTGTACCAAGTTTAG
Protein Sequence
MRINYQNIWVDQWPKSGSMLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTEGKPHQSSIKITLASSPATAYNLPSVNKRHATPSLVYVQKLPRKLYQV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-