Eint010644.1
Basic Information
- Insect
- Eupithecia inturbata
- Gene Symbol
- -
- Assembly
- GCA_963662085.1
- Location
- OY759186.1:11097963-11098442[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-09 5e-07 29.9 0.0 8 39 31 62 25 67 0.89 2 2 9.4 4.6e+03 -2.0 0.0 21 37 88 105 87 112 0.79
Sequence Information
- Coding Sequence
- ATGGTACAACTTTTTCTTACAGGCAAACGCACTAGGAGAACACTGGGTAAAAGAAATTATAAACGTTATTCGGACAATTTGCGTGAGTATGCTGTAGAAATGGTCAAGAACAAGGAAATGTCCGCCAAACGTGCAGCATTAACTTTTGGCATACCAAAAAGTACCATTTCATATAAGGTACAAggtgtacatttaaaaaaaccagGCCACCCTATAAGATTAAGCAAAGAAGAAGAGTCAAAGCTCGTAGTTTTATTGATTAAAGCAGGAGCTGACTTCGGGTCTCCGTTGTCAGTACTAGATTTAAGACGAATTGCCTTCAAGTATCTTAAGAAACATAACAAAGCAAAAGTTTTCGACAACAAACCACCGGGTGTGACGTGGGCCAAGGGTTTTATAGAAAGACACAAAGATGAACTGGAGGATTATGTTGATCAAGATATAAAAGGAGCTCGGGCTGAAAAAACtgacataaattaa
- Protein Sequence
- MVQLFLTGKRTRRTLGKRNYKRYSDNLREYAVEMVKNKEMSAKRAALTFGIPKSTISYKVQGVHLKKPGHPIRLSKEEESKLVVLLIKAGADFGSPLSVLDLRRIAFKYLKKHNKAKVFDNKPPGVTWAKGFIERHKDELEDYVDQDIKGARAEKTDIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -