Basic Information

Gene Symbol
ct
Assembly
GCA_963662085.1
Location
OY759197.1:854191-885460[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.1e-27 5e-23 81.5 0.0 3 70 361 429 359 436 0.94
2 3 8.2e-32 5.8e-28 97.4 0.0 4 77 761 835 759 837 0.96
3 3 1.2e-30 8.2e-27 93.7 0.0 3 75 964 1037 962 1041 0.95

Sequence Information

Coding Sequence
ATGTCTGATGGATTTAAACCTAAAAAATCCAGTGTTCTCAGTCAAAAACGTGGCGCTGGAAACGTAAAAATCGCCCAGCTAGTAGAAGACGTGCGCAGGCTCCAGTCATCGCTTGCAGCCCTCCAAGAGGCGCACGCGCAGCAGCTGCAGCGGCTGGAGGAGAGGCTGGATGAGAAGAAACAGCATATTGCTAGGTTGGAGGCGAGGCTAGACGGCCAGCGGGACTATGATGATGTCAAGAGAGAGATCAAACTCAACCTAAGCCTGCAGCCTTCACAGAGTCCCCGGCCATGCACCGCGTTGCCTCAGCGTAAACAAGGTACATCAACACACGAGGTGAACGACCTTCTTATCAAATTTATCAACGCTAGTTACGAAACGTGGCTAGGGACGCGATCGAGAAGCCTCTTCGAGAGGGACAAGGATAGCATGCTCCGCTCGCTAGACCTGGGCAGCGAGCGCTCAGACCGCTCCGACCGCCTGGACCGTTCAGATCGATCTGATCGCCTAGAACGCTTAGAGCGACCCGATCGGCTAGACCGCCCAGATCGGCTAGAGCGCCTAGAACGTGAGCGAATCGAGCGCAAGCCCGAACGTGAGCCGAGCGTTGTGCCGAACGAACGAAGATCTGTCGAACGCGAACGGAGCACTGAAAGAAGAGAACCAGCTAGTGTGTTCGCTTCCTTTCTAGCCGTCATACGATTCACGGTCGTTACCATCCGgagcatatacatacatatgtacaacCACAGACGCCGCGACTTGCGAAGTCCCTTCCCTCCCCTCCTCGCGTCCCCTAACCGTGCTCTCACCGCAGGTCCCGAGGAGTGGCCCAGCACGCCTCCGCTCAACAATAACACGACTCACCACAACAACAATGGCCCGACGCCACTGCCGTTGCCGCCGCCGAGCCCCTTCCGTTTCGACGACCACCGTCCCTATCGCTTTGCTGATGACATGGGGCCCTTACCACCAGGCGCTTTAGTCGGACGACTCGGAGACTCTCTGATCCCCAAAGGAGACCCCATGGAAGCGAGATTGCAAGAGATGCTCCGAtacaatatggataaatacgcGAACAGTAATCTGGACACCCTGCACATCAGTCGAAGAGtcagagagttactttcggtcCACAATATTGGACAGAGATTATTCGCCAAGTACGTCCTGGGGCTGTCTCAAGGGACGGTGTCGGAGCTCCTGTCGAAACCGAAGCCCTGGGACAAGCTGACTGAGAAGGGACGGGACTCCTACAGGAAGATGCACGCGTGGGCTTGCGACGAGGCCGCGGTGATGCTACTCAAGTCTTTGATCCCTAAGAAAGTTGGTTCAAAGGATGGCAGCATTGGTCCTGGTGGTTTCGGAAGGTCTGACGGCGAGGGAGACGACAGACTGGCTCACATCCTCAGCGAGGCTTCTCATATGATGAAGACGCCCTCGGGAGCGCCCATAAACGATGATTCTAGGAGCAATGAAGACTCCAGCTCGCCTAGGACGCAGTGTCTTTCACCTTTCTCGAAGGACTCGAGCCAAAACCGAAGGCTGAAGAAGTATGAGAACGATGACATTCCTCAGGAGAAGGTGGTTAGGATCTACCACGAGGAGCTCGCCAAGATCATGACCAGGCGGGTCGAGGATATCCGTCACAACCGGGAGGGCTTTCCTGGTATGTTTCCCCCCTTTTTCAGCGGCGGCATGCCTCCCCACATGGAACGTCCTCCCGAAGACATCCGCATGGCCTTAGAAGCATACCACAGAGAACTGGCCAAGATCCAACCTGGTGGCAACATCCCCAATTTACACAACCTCCCAGGAATGCCACCTTTCCCGAACCTCCTCGCTCTACAGCAGCAGGCCATGCAACAAGCACAGAACCAACACATAAACGGTGGAGCTGTCCAAGATCTCTCACTCCCAAAGGATAAGAACGCCAAAATGAACGGACTGACTGATAGCGATAAGGAAAGATCTATGGATGCTGAGGAGGCGATCCGACACGCTGGCAGCGCGTTCTCCCTCGTCCGACCAAAGCTGGAGCCTGGCCAGTCTACGGGCTCGTCCGCTTCAAGTCCGTTAGGAAACGCGATTCTTCCCCCAGCGATAACGCCTAACGATGACTTTAACACTTCAGCGGCCGCCAGTCCGCTCCAACGCATGGCTTCTATAACCAACAGCCTGATCTCTCAACCGAACAACCCTCCCCACCACACTCCAGCTCAACGATCAATGAAGGCAGTGCTTCCACCAATCACACAGCAGCAATTCGATCTCTTCAACAACTTGAATACTGAAGACATCGTCCGAAGAGTGAAAGAGGCCTTGAGCCAGTACTCGATCAGTCAAAGACTGTTTGGAGAGTCTGTGCTAGGGCTGTCGCAAGGGTCGGTCAGTGACCTCCTGGCGCGGCCAAAGCCCTGGCACATGCTGACGCAGAAGGGCCGGGAGCCTTTCATCCGGATGAAGATGTTCCTTGAAGATGACAACGCGGTGCACAAGCTGGTCGCCAGCCAGTACAAGATCGCGCCGGAGAAGCTCATGAGGACTGGAAACTACAGCGGAGCACCGATATGTCCGCCAATCATGAACAAACCAATGCCTCCAACGCAGAAGATGATCTCAGACGCCACCTCTCTGCTCAGCAAGATGCAGCAGGAACAACTCCTAGGACCAGGTCACATGGGGCACTTGGGGCAGCCTCCTCCACTACTGCTGACACCCCCCGGCTTTCCCCCACACCATGCAGTGACCCTTCCTCCTCAACATCACGACAACAACAACAAGGAGAGGAAACCGCCACCACCACCACAGCCGCACCACCATCCACCAATCATGCGCAGTCTCCACCAACACATATCCCCCAGCGTCTACGAAATGGCCGCGCTAACGCAAGACCTTGACACTCAAACGATCACCACAAAAATCAAGGAGGCTTTACTTGCAAACAACATTGGACAGAAAATCTTTGGAGAAGCTGTCCTCGGTCTTTCCCAAGGTTCGGTCAGCGAGTTGCTCTCCAAGCCCAAACCCTGGCATATGCTGAGCATCAAAGGCCGAGAGCCGTTCATAAGGATGCAGCTGTGGCTCAGCGATGCTCACAACATCGATCGCCTGCAAGCTCTGAAGAACGAGCGGCGGGAGGCCAACAAGCGGCGCCGTTCCAGCGGTCCCGGGCAAGACAACTCCTCTGACACGTCATCCAATGACACGTCGGAGTTCTACCACTCCAGTTCTCCTGGACCGACCACGGGAGCCCCCTGCGCTAAGAAGCAAAGAGTTCTTTTCTCTGAAGAGCAGAAAGAGGCTTTGAGACTTGCGTTCGCTCTTGACCCCTACCCTAACATGCCGACGATAGAATTCCTTGCCTCTGAACTAGGGTTGTCGACGCGGACCATAACCAACTGGTTCCACAACCACAGGATGCGGTTAAAGCAGCAAGCGCCGCATGGTCTCCCAGCGGAACCGCCCGCGAGAGACCAGTCTTCCGCTCCATTTGACCCGGTCCAGTTCCGTTTACTCCTCAACCAGAGATTGCTGGAATTGCAGAAGGAAAGGATGGGCTTGGCTGGAGTACCGCTTCCATACCCGCCGTACTTTGCCGCTAATTCCAATCTAGCTGCTTTGATCGGTCGTGGTTTAATACCTCCAGAAGACGCGGTGAAAGACCAGAGTGGAGGCCTAGATTTATCTATGCCGTTGAAACGGGAACCAGATGGTGAGGATTACGAGGATGATGATGTGGAAAGCAACCTCGGGTCGGAAGACTCGCTGGACGATGAGTCAAAGACTGAGCCGAAAGCGGCGTCGACGCCGACCGCCCGCTCCAGCAGACGGAAACCAGCCGCGCCTCAATGGGTCAACCCTGACTGGCAAGAGGACAAACCGAGAAACCCTGACGAGGTCATCATCAACGGAGTCTGCGTGATGAGAAGCGATGACTTCAGGCGAGAGTCTGAGGAGACGGTTCGTATTGAGCCCTCTCCGGTCCCCAGGGAGGGGTCCCCCCTTCCTCCAAGGACCCCTCAGACCCCGCAGACTCCGCGGCCGCTGCACACGCCCGATGACGTCATCCCGGAGGACAAGATAAAGTCCGAGACGGATGACGATCGCTGGGAGTACTGA
Protein Sequence
MSDGFKPKKSSVLSQKRGAGNVKIAQLVEDVRRLQSSLAALQEAHAQQLQRLEERLDEKKQHIARLEARLDGQRDYDDVKREIKLNLSLQPSQSPRPCTALPQRKQGTSTHEVNDLLIKFINASYETWLGTRSRSLFERDKDSMLRSLDLGSERSDRSDRLDRSDRSDRLERLERPDRLDRPDRLERLERERIERKPEREPSVVPNERRSVERERSTERREPASVFASFLAVIRFTVVTIRSIYIHMYNHRRRDLRSPFPPLLASPNRALTAGPEEWPSTPPLNNNTTHHNNNGPTPLPLPPPSPFRFDDHRPYRFADDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANSNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAVMLLKSLIPKKVGSKDGSIGPGGFGRSDGEGDDRLAHILSEASHMMKTPSGAPINDDSRSNEDSSSPRTQCLSPFSKDSSQNRRLKKYENDDIPQEKVVRIYHEELAKIMTRRVEDIRHNREGFPGMFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPGGNIPNLHNLPGMPPFPNLLALQQQAMQQAQNQHINGGAVQDLSLPKDKNAKMNGLTDSDKERSMDAEEAIRHAGSAFSLVRPKLEPGQSTGSSASSPLGNAILPPAITPNDDFNTSAAASPLQRMASITNSLISQPNNPPHHTPAQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPICPPIMNKPMPPTQKMISDATSLLSKMQQEQLLGPGHMGHLGQPPPLLLTPPGFPPHHAVTLPPQHHDNNNKERKPPPPPQPHHHPPIMRSLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTTGAPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLASELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALIGRGLIPPEDAVKDQSGGLDLSMPLKREPDGEDYEDDDVESNLGSEDSLDDESKTEPKAASTPTARSSRRKPAAPQWVNPDWQEDKPRNPDEVIINGVCVMRSDDFRRESEETVRIEPSPVPREGSPLPPRTPQTPQTPRPLHTPDDVIPEDKIKSETDDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01338275;
90% Identity
iTF_00700898;
80% Identity
iTF_00700898;