Basic Information

Gene Symbol
kn
Assembly
GCA_963662085.1
Location
OY759188.1:5361964-5383558[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.5e-20 7.8e-16 58.1 3.2 177 213 67 103 63 103 0.92
2 3 6.4e-63 9e-59 199.9 0.1 294 387 100 194 99 198 0.97
3 3 0.00021 2.9 6.7 0.9 420 467 203 254 194 263 0.62

Sequence Information

Coding Sequence
ATGATGCCTAGTTGGGTAAAGGAGCTTACAAGCCGCGCGATTGCCCCGCTCTGGGTACTCGTATATTGTCAATTGGAAACTGCTCGGCTTCAGCAAGCGCTTTTAGATTTGAAAGAAACAACTGGTCTAGTGTGCTATTTCGGTGGACAGCGGGAGCAAAGGCGACAAAAAATCGCAGCCTTTTTCTGTTTCTGTTCCCCGCTACCACTCAAAAGATTTTTCCTCAAATTCTTCCTGAAGTGCAATCAGAACTGTCTGAAAAACGCCGGGAATCCTCGGGACATGCGAAGGTTTCAACTTATAACGTCTCACGCGATACGAGTCCAAACGCCTCCGCGGCACATACCGGGCGTGGTGGAAGTCACATTATCGTACAAAAGCAAGCAGTTCTGCAAGGGAGCGCCGGGGCGatttgtctatgtttCAGCGCTGAACGAGCCTACGATAGATTACGGATTTCAGCGTCTCCAGAAACTAATACCAAGGCATCCTGGTGACCCGGAGAAATTACCCAAGGAAATAATCCTAAAACGAGCAGCGGATCTAGCCGAAGCGCTATACTCTATGCCTCGCAACAACCAGCTAGGCCTGGGCGGGCCTCGGTCGCCCACATCCAGTATGTCTTTTAACTCTTACACGGGACAACTCGCTGTCAGTGTGCAGGATACTGCGGCTTCGCAGTGGACTGAAGGAATGGGTGGCCTAGTTTCATCACCGTTCAGCGTAAATCCCTTCTCTCTACCAACTTGCAGCGCCCAGCAGTACGCCCAAACAGCGCCTTTAGCCTCCAAGTAG
Protein Sequence
MMPSWVKELTSRAIAPLWVLVYCQLETARLQQALLDLKETTGLVCYFGGQREQRRQKIAAFFCFCSPLPLKRFFLKFFLKCNQNCLKNAGNPRDMRRFQLITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGGPRSPTSSMSFNSYTGQLAVSVQDTAASQWTEGMGGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00700734;
80% Identity
iTF_00700734;