Eins004032.1
Basic Information
- Insect
- Eupithecia insigniata
- Gene Symbol
- -
- Assembly
- GCA_947859395.1
- Location
- OX402020.1:8339144-8359043[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 7.5 4.9e+02 1.9 0.9 1 10 454 463 454 466 0.92 2 11 5.9 3.9e+02 2.2 6.0 1 23 483 506 483 506 0.94 3 11 0.11 7.4 7.7 1.7 1 23 510 532 510 532 0.98 4 11 0.0032 0.21 12.5 1.2 1 23 537 559 537 559 0.96 5 11 0.006 0.39 11.7 1.2 1 23 563 586 563 586 0.96 6 11 0.0027 0.18 12.7 0.5 2 23 598 620 597 620 0.96 7 11 1.1 73 4.5 0.3 6 19 629 642 627 645 0.94 8 11 2.6e-05 0.0017 19.1 1.2 1 23 724 746 724 746 0.96 9 11 2.2e-05 0.0015 19.3 1.3 1 20 752 771 752 774 0.95 10 11 1.9e-05 0.0012 19.5 4.3 1 23 779 801 779 801 0.98 11 11 8.8e-05 0.0057 17.4 0.2 1 23 807 830 807 830 0.96
Sequence Information
- Coding Sequence
- ATGGCCAACGTGATATGTCATATCTGCCTCCGCACGGACATAACCGCTGTAAACATAGATACTACGGAACTCATCGATTTCATCGATGAGCTATGCGATTACAACATTATTGAGAATCCAAGATACAAGTACTGTACAATTTGTGTCCATCTCCTGAAAAAGTTCTATAACTTCAAACAGCAATGCTTAAAAGCTTGCAAGATTCTAAAATCCCTTAAAGGGACACCGAAGATTTTACCAACCAATCTTCATGAACAGATACCTTCATCAATAGGATTCTGTAGCAGCTCAGCTCGATACAAGGTGGTTGAGTACCAACATCATACTGACAGTGATCTACTCGAAACCAGACCTCATCTCAACATTGATCCTAACATCACATCAAACAATGCGGAAGGATACAAAAAAAAGAACTTGGAAACTGCTGACCTGATACTACCAGACTATACTGAAGTAAAGGATGAGCAAATGCATGATGTACTAGACTCCGATATTGAAACAATGCTAGTTGCAGATGGTGAAAACATTTACATTATTAATACAAGTGATGGTTATTTGACTATAGATGGCAATTTTGAGAAAGACAGTAAAAGCATTAAGTTTGCAACAGATAAAAAGGAACTGAAGACAGATACAAACAAAGATGGTTCAAAAGATAACGTAAAGCAATCAGAAATTAATAAGCTTCTTAAAAGCTTCGAGAAAGAAATTGACGTATCTGTGGATAAAAGTGTAAATGCGGTTGACATAGAAGTTAATGATACTACGTCTATGTTTAATAATGATTCTTCAAGGGACGATGAAAGTTCAAACTTTATGGACGATGAAGAGAGTGGTATTCGTGAACGTGATGTTGAAAGCCTACCTAAAGATGAACAAAACTGTGAATCGGACTCTGACTTAGGCAGTCTGTCTGACATCTTAGAAACAACTAAAAACAAAACACTCAAAGTCACTGAAATAAACGATTTAGAGCTAGCAGAGATACTTCTTAAGGTAGATAGACGAAATAGATTACTTAAAAGAAGAGTTCAGTTTTTAACAAGTAAAGCCAATTTTAAGGATGGTCTCTTAAAGTTATTTGAAAATGATGAGTATGACTTTGGAGATGGCGTTAAGTTGAGCAAAGAGTTGTTCCTCAAGATGTTTGATAGATGTGAAAGCTCCTATTATTTTAATCCTAATAATTACAAAGTTGAGTCGGTTGAACAGAAAAATGACGAGCTCCTGCGCTATCTGTATAAGATGTACAACCCAGAATATGAAACTGTGTTCGACATTGAATACCTCGATACTGAAAAGAAGAAATTACAGGAGTTTAACCGGCGCAAGGACAGGGCGGAGTACCAGAACGCTCCGTACAAATGCGAGCGCTGCTACAAAGGATTTGTAATTGAGCGGATGCATGCCTTCCACATGGAGAAACACGAAGAGTCATCTGGCCCGCACGAGTGCCACATATGTTTCCTTCGCTACCCAACAAAGGCTGTGAAAACCAAGCACCTTATGCAATGCCACTCGGCCGTGTATGTGTGTCGGCTGTGCCAGATCACATTCTACTACTTTGAGAGCATGCTGAATCACTTCAATATGCACAAAGGTGTCGAGTACCTGTGTTCAATCTGTAACGGCATCTTTAGCACCCATACAGGCTTGGCGAATCACAAGCGGAGCCACGTGACGTCGCATATATGCACCACGTGCGCTAGATCATTCGTGTCGGCGATGGGACTAGCAAACCACAGGAAACGCAAACACAAGGGCGCGCCGGCGGCGGGTGCGAGTGCGGTGCGCTGCACAGAGTGCCCCCTCACACTCGACTCACAGAAGGCTTTCAAAAAGCATCTGAAAGTCTCGCACCGTAAATTCTCCTACATATGCAGCTGTTCCAAGAACTTCTCATCCATGGCGGAGCTGAGACAACACAAGGTGGATGCGGGACATCAGCACGCCAACAGGAAGAAAGTGGAAAAAATCGGACCTTGGATCATAAAGAAAAGTCGCTCCCGCAAGAGTAGAGGACCTCCGAGAGAGAAGGCTGCAGTGAGGACGTGCCCAGTTTGTCAAGAAGAGGTTCCGAACACCTTCCCTCTTTCTCTGTACAGGCACCACGAGACGCATCACCCGAGCGTGCCCTATCACGCTGAGGACACGAACATAGTCAAAAACTACCTGTGCGAAGAGTGCGGGAAGCGGTTCATCGTACAATCACATTTGCTGGATCACAAGAACAGCCACACAGGCGCTCGGCCATACCAATGTCCGGAGTGTCCCCATACCTTCACGACCGCCAACCATCTTTTGAAGCACTTGCCTTGGCACCGTCCGCCGACACACCAGTGCAAGTTCTGCGGGAAACTCTTCAAAACCAAAACCAATCTCAGCACACATGTACGAATTCACAAAAACGACCGTCGCTACATATGCGATGTCTGCTCCGCGAGTTTCATTCACTCCGGTTCCCTGAAGGAGCACATCAGAGGGGTACACCAACATCAGAGGCGAGTGAGGAAACATAAACAAACGTTAAATAACAAAAGTTAA
- Protein Sequence
- MANVICHICLRTDITAVNIDTTELIDFIDELCDYNIIENPRYKYCTICVHLLKKFYNFKQQCLKACKILKSLKGTPKILPTNLHEQIPSSIGFCSSSARYKVVEYQHHTDSDLLETRPHLNIDPNITSNNAEGYKKKNLETADLILPDYTEVKDEQMHDVLDSDIETMLVADGENIYIINTSDGYLTIDGNFEKDSKSIKFATDKKELKTDTNKDGSKDNVKQSEINKLLKSFEKEIDVSVDKSVNAVDIEVNDTTSMFNNDSSRDDESSNFMDDEESGIRERDVESLPKDEQNCESDSDLGSLSDILETTKNKTLKVTEINDLELAEILLKVDRRNRLLKRRVQFLTSKANFKDGLLKLFENDEYDFGDGVKLSKELFLKMFDRCESSYYFNPNNYKVESVEQKNDELLRYLYKMYNPEYETVFDIEYLDTEKKKLQEFNRRKDRAEYQNAPYKCERCYKGFVIERMHAFHMEKHEESSGPHECHICFLRYPTKAVKTKHLMQCHSAVYVCRLCQITFYYFESMLNHFNMHKGVEYLCSICNGIFSTHTGLANHKRSHVTSHICTTCARSFVSAMGLANHRKRKHKGAPAAGASAVRCTECPLTLDSQKAFKKHLKVSHRKFSYICSCSKNFSSMAELRQHKVDAGHQHANRKKVEKIGPWIIKKSRSRKSRGPPREKAAVRTCPVCQEEVPNTFPLSLYRHHETHHPSVPYHAEDTNIVKNYLCEECGKRFIVQSHLLDHKNSHTGARPYQCPECPHTFTTANHLLKHLPWHRPPTHQCKFCGKLFKTKTNLSTHVRIHKNDRRYICDVCSASFIHSGSLKEHIRGVHQHQRRVRKHKQTLNNKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -