Basic Information

Insect: Eupithecia insigniata
Gene Symbol: ush
Assembly: GCA_947859395.1
Location: OX401996.1:1926290-1934112[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0078 0.51 11.3 0.2 1 20 116 135 116 137 0.94

2 9 3.2e-05 0.0021 18.8 1.6 1 23 172 194 172 194 0.99

3 9 0.025 1.7 9.7 1.2 2 20 224 242 224 244 0.93

4 9 0.022 1.4 9.9 4.1 2 21 485 504 484 505 0.95

5 9 0.0065 0.43 11.6 0.2 3 20 533 550 531 552 0.90

6 9 1.3 88 4.3 0.0 2 23 585 606 584 606 0.94

7 9 0.0042 0.28 12.1 1.2 1 23 612 634 612 634 0.99

8 9 0.079 5.2 8.1 2.5 1 23 673 696 673 696 0.96

9 9 0.065 4.3 8.4 0.8 2 20 733 751 733 753 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0078	0.51	11.3	0.2	1	20	116	135	116	137	0.94
2	9	3.2e-05	0.0021	18.8	1.6	1	23	172	194	172	194	0.99
3	9	0.025	1.7	9.7	1.2	2	20	224	242	224	244	0.93
4	9	0.022	1.4	9.9	4.1	2	21	485	504	484	505	0.95
5	9	0.0065	0.43	11.6	0.2	3	20	533	550	531	552	0.90
6	9	1.3	88	4.3	0.0	2	23	585	606	584	606	0.94
7	9	0.0042	0.28	12.1	1.2	1	23	612	634	612	634	0.99
8	9	0.079	5.2	8.1	2.5	1	23	673	696	673	696	0.96
9	9	0.065	4.3	8.4	0.8	2	20	733	751	733	753	0.92

Sequence Information

Coding Sequence: ATGCCTTCAGTTCGATCGAACTCAGGTGAGGACGAGGAATGGGGAAACGAGAGCGAGGGGATGCCGGGAGAACCTCGTACGCCGAGTTCGGGCGCCATGTCGCCGGCGTCCGGCGCGTCGCCCGCCGCGTCCGCAACCGCGTCGCCGCCGCGACTGCGCCTCAACACTAGCCTGGCCACCGACCCGGCCTTAGCTCCTACAGCGACGGTCCTGAAACGGGAGCTACCCTCGCCATCTCCACCGCCCGCGCCGCCTGTAGCTTCCAACACTCCCCAACCAAGGGATTACCTGGCCGTCGCAGCTGCGGCTTTCCCCGGTCTGTTCCCCGCGGCTGGTCCACCTGGATACATCTGCAAGCCGTGCGGTATCCGCTACTCATCGCTCAGCACGCTACAAGCGCACCAAGAGCACTATTGCTCCAATCGCCGACCGAAAGAAGGTACCGATTCCCCGGCCGATGCCGCAGACGAGTCCAGCGGAGACTCGAAGACGCCACGACCGCCTAATAAGCAGTACCAGTGCACGTACTGCTCCTACAGTGCGGATAAGAAAGTAAGCCTGAACCGGCACATGCGCATGCACTCGTCTTCGCCCGTCAGCAGCGGCACGCCGGCCCCCACGCCCACTTCCAACGGGGAGACGGCGGACAGTCCGCCGGCACCGGATCGCTACTGCACGGACTGCGATATACGCTTTAGCTCGATAAAAACGTTCCGCGCCCATAAAACCCACTACTGCAGTACGAGGCAGGTGGTCAAGAACACGCCGGCCGTAACGAGAGGAAGCTCAGCGTCAGGCTCCGCGCCGCCATCACCGGGCCCTACCCCGCCGGCTGCAAGCGGCTATGCCCTCGCACTACCCACGACACCGATCCTGATATTACCGATAGGATTACTCAGCAAAGCCAGCACGCTCCCTGGCACCACTCTTCCCGATCCGGACACCCCCTGCTTTCTCCTACCCAACGGAACATTTCAACCCTTCAGCCACGCGCTGCCGAACTTACCCACCGATGGTAAAGCAGCTGAGGTGCTTAAATCTGCGAACAGGCCTCGAGAAAACTCAAGAGATGGCGGACAGACTCCGCTGGATCTGAGCATGAGGCGAACCCCAGAATCTGTGACGATAGATGAACATGAGAAAGAAAATAGGATGAGGTCGACGACCCCTGAGCAGATAGTATGCGCGCCATCACTGCCCGGGTCCCCTGGGACACCGTCGCCTTCTCCACGTCGATCGTCTTCCCCGAGCGGAGAGAGCTCGCCGAAACGACGACGTCGAAATAGCTCCCGAGGGCCGACTCCGAAACCGCCTAGTGTACCTTCACCGCCCGAAGAAAAGTTTAACCCCGGCCCGCCTGTGATCCTCCCCCCCGGCTTAGCCATGCGTCTCGCAGCAGAACTGCCCGTAACCGGCGTCTCTCCCCAAATGCTGGTAAAGCAGGGCGTATCCAAATGCAAAGAGTGCAACATAGTCTTCTGCAAGTACGAGAACTATAAAATCCATAAGAGGCACTACTGTTCAGCCGGGGGAGGCGAAGACCGGTCGAGCCCAGCGCCTGAACCCGGTCCTCCGCAGCAGTACCGACAACTGATCTGCCTAGCTTGTGGGATCCACTTCAGTTCGCTGGATAATCTAACAACGCATCAGAGTTACTACTGCACGAAGAGGGAAACGCGTTCGCCGCGCGCCGCCGTTACCGCAACTCCAGTCATCGAATCTAGAGTGACAACAGGGACTGAAGGAGGCTGGAAGTGTCCTTGTTGCGACGTGGTGTCTCCCACGGCAGCGGCGGCCCAGCGGCATATGGAGGCCCATGCGGGCGTGAAGGCCTTCCGCTGCACTATATGCCAGTACCGCGGGAACACGCTCCGGGGAATGAGGACACATATACGCATGCACTTCAATAATAAGAAGCCCGCTGAAATGCAGGAAGAAAGCTACATAGCCTGCGTCTTAGAAGACGACAACCGAGAAGCCACGTCCCCCAGCCCAGCAGCGACCGGCGAACGCATCCATCGCTGCAGCCACTGCGCCTACACATCCACCTACCGAGGCAACGTCGTCCGCCACGCGAGACTCGTCCACGCCACAGACGAACCAGAGGAAGAACGCCCCGACCCATCACCCCCTGTTGCACCCCTCACAGTCGTCGACATTAAAAAGGAACCAGGCACGGAGGAAGAAACCCCGAACTACTGCAAAACCTGCGACATATCCTTTAAGTACGTGAATACGTATAAAGCTCATAAGCAGTTTTACTGTAAGGCGACACAGGAGCCTGTGGCTAATAATAATGTGCCGGCGCCTAGGGTGAGCGATGCGGCAGTACTATAG
Protein Sequence: MPSVRSNSGEDEEWGNESEGMPGEPRTPSSGAMSPASGASPAASATASPPRLRLNTSLATDPALAPTATVLKRELPSPSPPPAPPVASNTPQPRDYLAVAAAAFPGLFPAAGPPGYICKPCGIRYSSLSTLQAHQEHYCSNRRPKEGTDSPADAADESSGDSKTPRPPNKQYQCTYCSYSADKKVSLNRHMRMHSSSPVSSGTPAPTPTSNGETADSPPAPDRYCTDCDIRFSSIKTFRAHKTHYCSTRQVVKNTPAVTRGSSASGSAPPSPGPTPPAASGYALALPTTPILILPIGLLSKASTLPGTTLPDPDTPCFLLPNGTFQPFSHALPNLPTDGKAAEVLKSANRPRENSRDGGQTPLDLSMRRTPESVTIDEHEKENRMRSTTPEQIVCAPSLPGSPGTPSPSPRRSSSPSGESSPKRRRRNSSRGPTPKPPSVPSPPEEKFNPGPPVILPPGLAMRLAAELPVTGVSPQMLVKQGVSKCKECNIVFCKYENYKIHKRHYCSAGGGEDRSSPAPEPGPPQQYRQLICLACGIHFSSLDNLTTHQSYYCTKRETRSPRAAVTATPVIESRVTTGTEGGWKCPCCDVVSPTAAAAQRHMEAHAGVKAFRCTICQYRGNTLRGMRTHIRMHFNNKKPAEMQEESYIACVLEDDNREATSPSPAATGERIHRCSHCAYTSTYRGNVVRHARLVHATDEPEEERPDPSPPVAPLTVVDIKKEPGTEEETPNYCKTCDISFKYVNTYKAHKQFYCKATQEPVANNNVPAPRVSDAAVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00662644;
90% Identity: iTF_00663582;
80% Identity: -