Eins011178.1
Basic Information
- Insect
- Eupithecia insigniata
- Gene Symbol
- -
- Assembly
- GCA_947859395.1
- Location
- OX402007.1:1347123-1356575[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.023 1.5 9.9 1.0 1 20 295 314 295 315 0.97 2 10 0.42 27 5.9 1.7 1 19 331 349 331 353 0.89 3 10 1.9e-05 0.0012 19.6 1.1 2 23 359 380 358 380 0.97 4 10 0.00055 0.036 14.9 1.5 1 23 384 407 384 407 0.95 5 10 0.003 0.2 12.6 0.2 6 23 569 586 567 586 0.94 6 10 0.15 10 7.2 0.2 2 23 606 628 605 628 0.95 7 10 1.1e-06 7.5e-05 23.4 4.1 1 23 634 656 634 656 0.98 8 10 0.017 1.1 10.3 4.6 1 23 661 683 661 683 0.96 9 10 0.1 6.8 7.8 7.4 2 21 690 709 689 712 0.94 10 10 0.27 18 6.5 1.1 3 19 749 765 748 770 0.94
Sequence Information
- Coding Sequence
- ATGGATCCGGCCAACGTCGTAATAGACTCCGGCATGGCTTATCCCATCCTCTTCATGCCAAAGAAGTGCACAACACTTGAAACCACCTGTGGAATCTCTGATAACGTCTACATAAACGTATGCATCACGTCGCCCGACACGGAAGGGAACGACACAAGCATTTACAACGGGTACTGCAACGTGAAACTAGTGGATTCATATAACGTGAGCCCCAACCGTGACATTTCATCTCCAGATACCATCAGCATAGATCAGATGCCGGTCATCTTATCTGAAGATAGCTCACCGTATGGCCAATCGCAGGTATGGATAGATCCATCGAGAAGCCCCTATGTTTATAATCACTATGACCCATCAAGCCAGGAGAATTACTCCGTCCATGAGACTGGTGGGCTGATAACTGTTGAGCAACACAATACATATATCACTCAGAATGTGTACAACTGTAAGGAGGCCAATGTGTTGACCTGCAAAGAGGTCCCATCACCTGTGAATGACGCTGGGGTGAAGCGGTACAGGAAAGTGCAGGAGTCGGTAACCGGGCACTCGGATACCAACCTGAGTTATTACGAAGAGGATGAGTTTGAATGTGGGGTGTTCCTCTCTCAGCTACCAGAGGAGATCATGAATGAGACACAGTCTAGAATCAGAGATGAAAGGAAATTCGCCAGCCAGATCGAAACCAATGCCCTCAAACAGCTGATGTCGGACGTCAAATCACCGTCGAGGCAGCGGAGGACCATCCTGTACCTCGGGCATGACTCACACTCAGGGCAGACCATTCAGAACATATCCTACAATGACCCGGGGGTCGAGTGTGCTCCTGTGGAGGAGGACAATGAACTTGCAATTGATAGCTCATCAGATTACCCAATGAAGAAATACCAATGCGACAAATGTAAGAAACTATTCCTTCAAATCTCCTCATTCCGCCGACACATGGTTGGAAAATACACCAAAAAGCAAGATCTAGCCGAGAATGAACTCAGTTTTATGTGCATTGACTGTGGGAAAACTCTAAAGACCCAAAGAAAGTTCGAGATCCACTGCCTGGGCCACGGCGATCCCGACCTAGAATGCTCGAAGTGCCTAAAAGTCTTCGCTTCAAAGTTCTCTCTTCGCACCCACATGAAAATACACGATAGAAAGTATCCATGTAACTATTGCGACAAGTTCCTCGCAACCTTCCGCAATCTGAAGTCCCATCTGGTGAAAAAACACACTTTATTCATCTGCGATGATGAAAACTGTGCTTTCGTGACTCAGAAGCTATCAGATCTCGATGTACATCAGCATTGGAGCGAGTCGGAAGAAAAAAATGATTCTACGACGCAATACGTGGAGGTAGTAGATATTAATACTCCTGATGAGCTGGAAAAAACGTTCAAAACAGAAGTTAAGAACACAGATCAGGGGCTTTTGAACTCTGATTTAGTTCAGGAGAAAATTTCTGAGTCGAGCAGCCTTGACATAATTTATAGTGGACTTACAAACCAAAAATCAAAACCGGACTTTGCGAAATCAAACAAGAAGATAGCGAATGAAGACTTTGTATTACCAAATGAAAAGAAGTCAGATAAAACTGTTCCAGTGGCTGATAAAGATGGAGAAAGGATCAGGAAGGCAGATTCTGTGATTGCTACAGTCATGACGAATTCCATATTTCTCCTGAGCTCGAATAAAGCCAGGGAGCACAGGTATCTGTGCCAGAAATCGTTCGACCGGATGGACGACCTAAAAAGACACCTTATTGAGCACGTGATAAAGTCTTCTTTGGCTAAGATGCCTGTCACTGTTACTGGGCGTTTGAAAATTACTTGCGAGGTCTGTCAAAGCGAGGTATTCAGTAAAGTGGACAAATACAAAGCTCATCTCCGCGAGCACGCCAAACTTACTATTTACAAATGTACTTTCTGCGACAAAAGCTTCAGTGACTCCAGCAACTTCTCAAAGCACAAAAAGATCCACAGCCTGACCTACCACCAGTGCGACCTGTGCCACCGCAAGTTCAACTCCAAGAAGATGATCGTCCAACACATGGTCCAACACATGCGGACCAAACCGGTCAAATGCCGTTACTGCCACAGGATGTTCCACTTTCAGTCCATGCTGAACAAGCATGTCAAGTGTACCCATCAGAAGGACAAGTATCGCTGCCGTTTCTGTGATGAGATCTCTAGTACCGTGCAAAAGAAATGGGAGCACGAATGGGAAGCGCACAGCATCCGCAAGATGATAGTGGACTGCCTGATCTGTGGTGCTCAGTACCGCAAGTATACCGAGCTGAAGCGGCACTGCATCGACTCGCACAGCATCGACTTACCCACCGTTAAGAAACTCGCTAACAGGCCGTACAAGTTTGCTGACATCTCTTACGATTTGGACTATGAAAAGTATTAA
- Protein Sequence
- MDPANVVIDSGMAYPILFMPKKCTTLETTCGISDNVYINVCITSPDTEGNDTSIYNGYCNVKLVDSYNVSPNRDISSPDTISIDQMPVILSEDSSPYGQSQVWIDPSRSPYVYNHYDPSSQENYSVHETGGLITVEQHNTYITQNVYNCKEANVLTCKEVPSPVNDAGVKRYRKVQESVTGHSDTNLSYYEEDEFECGVFLSQLPEEIMNETQSRIRDERKFASQIETNALKQLMSDVKSPSRQRRTILYLGHDSHSGQTIQNISYNDPGVECAPVEEDNELAIDSSSDYPMKKYQCDKCKKLFLQISSFRRHMVGKYTKKQDLAENELSFMCIDCGKTLKTQRKFEIHCLGHGDPDLECSKCLKVFASKFSLRTHMKIHDRKYPCNYCDKFLATFRNLKSHLVKKHTLFICDDENCAFVTQKLSDLDVHQHWSESEEKNDSTTQYVEVVDINTPDELEKTFKTEVKNTDQGLLNSDLVQEKISESSSLDIIYSGLTNQKSKPDFAKSNKKIANEDFVLPNEKKSDKTVPVADKDGERIRKADSVIATVMTNSIFLLSSNKAREHRYLCQKSFDRMDDLKRHLIEHVIKSSLAKMPVTVTGRLKITCEVCQSEVFSKVDKYKAHLREHAKLTIYKCTFCDKSFSDSSNFSKHKKIHSLTYHQCDLCHRKFNSKKMIVQHMVQHMRTKPVKCRYCHRMFHFQSMLNKHVKCTHQKDKYRCRFCDEISSTVQKKWEHEWEAHSIRKMIVDCLICGAQYRKYTELKRHCIDSHSIDLPTVKKLANRPYKFADISYDLDYEKY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -