Basic Information

Gene Symbol
ZNF784
Assembly
GCA_947859395.1
Location
OX402020.1:6015416-6039688[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.17 11 7.1 1.0 1 23 378 400 378 400 0.97
2 10 0.028 1.9 9.5 0.3 1 23 407 430 407 430 0.94
3 10 0.44 29 5.8 0.2 1 23 434 456 434 456 0.92
4 10 0.0079 0.52 11.3 1.0 1 23 461 484 461 484 0.98
5 10 0.00025 0.017 16.0 1.0 2 23 489 511 488 511 0.96
6 10 0.054 3.5 8.7 0.1 2 23 599 621 598 621 0.96
7 10 0.018 1.2 10.2 0.1 3 20 638 655 637 658 0.92
8 10 1.5e-05 0.00097 19.9 0.7 1 23 664 686 664 686 0.97
9 10 0.00021 0.014 16.3 2.4 1 23 693 715 693 715 0.97
10 10 0.0001 0.0068 17.2 3.0 1 23 721 744 721 744 0.93

Sequence Information

Coding Sequence
ATGCGTTGCAGTGTTCAAAACTGCAGCAATGAGTCAAAAACATCAAGCATATCTGATGGAATTACTTATCATTTGTTCCCTAAAGAGCCAATCCTGAGATCAGCATGGATAGAAGCATTAGGTACACCAGATTTTACACCTAAAGAGCGAAGTGCTATATGCTCTGAGCACTTCAAATATGAAGACTTTTATGAAACTAAATCTGGTATGAAAAAGATTAAGAATGGAGCGCTGCCTGTGGTTGTTTTTCAGTCATCAGAAGACCTAGATGCGCCAGCTGCATTACGGGTGTGCAGAATATGCTTGGCAATGGACTCAAGGTTGCTTGACATCAGGGAGCAGAACCTAGAGCAGTTCTATCTTCAGATCACGGGAATATTTGTAAATAACGATAGACTGCCTCAGCGTGTGTGCTGGGAATGTGCAGCTAGACTGCGCTCGGCCGCCGCGCTCAGAGAGAAGGCGATGCGTGTAAACACTCTACTACACGGTCTTGCTACACAGAATTATATTACGGTAAGAGACATAAAATCGATCAACAGAACAAAGAACCAGCTCACATCAAGTCTCATCCAAAAAATATACGAAAATGACGATTCAGATCTACACGTAAAAGACAACGAAACCATCAAATCGGAAACGAATAACGGTTTCAACGATGACGATAATGATAACGGTTTTGACAATGATAACGGTTTTAATACCGATAACGTGGATAACGGTTTCGAAATGAAAGTTCCCGTTCCAGAGATAAAGGATGAAAATGAAATATTCGTAAATGAGTTTGATGATTTTGAATCTGATGATGAGAAAACATTAAGTACGCTTTCAAGTCAAGTATACGTCGATGATTTGAAGAAAGAAAAGTTAAAAGTGAAGAAGAAAAGAAAAGTGAATAAAGTTAAAGAAAAAGTGAAAGTAAAAGTGAAGAAAACTGAGACTGTTAAGAAGAAGGACGGCGAAGAAGATCCTGAGAGTACTATGGATAAGTACAAAACATCTGATATAAAGCGACGCAAACCCAACGATGGTTTGGACGAAACACTCTTCACTATCACAACTCCCACGTACGAGGAACAAATTGCTGAGGTTGAAAAACGGCAGGAATCGTCGTCGTACAAAAACGCACTGTTCAAATGCACAACGTGTTACCGCGGGTTTCAGATACGAGATCGGTACGAGGCGCATATTGTACGGCACAGTGAGAAATGCGGCATGTACGAGTGCTTTATCTGCAAAACTCGTCTAAAAGCTGCGCGGGCGCTTCGCAAGCATATAACAGCGCAGCACACCGAGCAATTCAGCTGTAAAGGATGTCCGTTTGTTACTAGGAACAGAGGCGTTGCTCGGGAGCACGAGAAGTGGCATGCCGGGACCAAGTATCAATGCCCACACTGCGCTATGGAGTTTGACAAACTAACAACATACATGGGCCACATCAGGATAAAGCACGCGTCGGACTGGGTGTGTCCTCACTGTGGGTACACATTCGTGAGTCGCAAAGGCGTGCTAGTACACAAGCGGAAGAAACATCGACTCATCGATGACAATACACCGCTAGAGGGCCCCACGTGTGCAGTGTGCGAGGTACAATTCGCGAATGAGGAGGCACACGCGAGACATCTCAAATTATCCTCCAGGCATATGACGGAGAGTGATCCGAATCGCCTCCGCAACGACTCGCAGAGCATGAACGCGGAACGCGTGGGACGCGTCATGAGACGCATCGAGCGGCGGCCCGTCATACACGGGCGGGGGGAGAGCGAGTGCGACATCCCCAGTAGACCGCATGTCACTTGTGAACAGTGCGGTGTAGTGCTCCGCGATTTGAGACTGTACGCGCAACATTTCCGTCGCGCACACCCCGACAAGAATCGAACCAAGTACCCTGCAATGAAGACTCCGGCCATGTGCGAACTGTGCGGACGGATATTCCAGAGTATGGCCCTCCTAAAAGACCACATGTGGGTCCACACGGGCGAGAAACGCTTCAAATGCGCCGGCTGCCCCAAAAGCTTCACCCAGAAGAGCAACTTGGTGTTCCACGAGCGCGTGCACAGCGAGCCGCGTCCGTCCTTCCCTTGCCCTCTCTGCGGGAAACACTTCGCCTTCTACAATAACAGGAGGCGGCACATGTTTATCCACACTGGCCTCAAACCATTCAAGTGCAACACATGCGGCAAATGCTTCACGACAGCAGGCGAGCAACGCGCTCATTTAGACCATGTTCACATGAAGAAACCTTGGCCTAAGCGCGCTAGGAAGGACTATGACAAGTGTCATACCGAGCCTTAG
Protein Sequence
MRCSVQNCSNESKTSSISDGITYHLFPKEPILRSAWIEALGTPDFTPKERSAICSEHFKYEDFYETKSGMKKIKNGALPVVVFQSSEDLDAPAALRVCRICLAMDSRLLDIREQNLEQFYLQITGIFVNNDRLPQRVCWECAARLRSAAALREKAMRVNTLLHGLATQNYITVRDIKSINRTKNQLTSSLIQKIYENDDSDLHVKDNETIKSETNNGFNDDDNDNGFDNDNGFNTDNVDNGFEMKVPVPEIKDENEIFVNEFDDFESDDEKTLSTLSSQVYVDDLKKEKLKVKKKRKVNKVKEKVKVKVKKTETVKKKDGEEDPESTMDKYKTSDIKRRKPNDGLDETLFTITTPTYEEQIAEVEKRQESSSYKNALFKCTTCYRGFQIRDRYEAHIVRHSEKCGMYECFICKTRLKAARALRKHITAQHTEQFSCKGCPFVTRNRGVAREHEKWHAGTKYQCPHCAMEFDKLTTYMGHIRIKHASDWVCPHCGYTFVSRKGVLVHKRKKHRLIDDNTPLEGPTCAVCEVQFANEEAHARHLKLSSRHMTESDPNRLRNDSQSMNAERVGRVMRRIERRPVIHGRGESECDIPSRPHVTCEQCGVVLRDLRLYAQHFRRAHPDKNRTKYPAMKTPAMCELCGRIFQSMALLKDHMWVHTGEKRFKCAGCPKSFTQKSNLVFHERVHSEPRPSFPCPLCGKHFAFYNNRRRHMFIHTGLKPFKCNTCGKCFTTAGEQRAHLDHVHMKKPWPKRARKDYDKCHTEP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00706423;
90% Identity
iTF_00699598;
80% Identity
iTF_00700185;