Eins023861.1
Basic Information
- Insect
- Eupithecia insigniata
- Gene Symbol
- -
- Assembly
- GCA_947859395.1
- Location
- OX402021.1:6132866-6136581[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.13 8.6 7.5 0.3 5 23 5 24 2 24 0.92 2 13 0.99 65 4.7 0.1 2 23 49 71 48 71 0.94 3 13 1.8 1.2e+02 3.9 1.3 2 23 94 115 93 115 0.93 4 13 0.21 14 6.8 0.2 1 10 120 129 120 132 0.90 5 13 0.012 0.78 10.7 0.4 5 23 164 183 161 183 0.92 6 13 1 67 4.6 0.1 2 23 208 230 207 230 0.94 7 13 0.12 7.6 7.6 0.2 1 23 252 274 252 274 0.95 8 13 0.0005 0.033 15.1 0.1 1 21 278 298 278 299 0.95 9 13 0.59 39 5.4 0.3 1 23 332 355 332 355 0.93 10 13 0.0069 0.45 11.5 3.5 1 22 362 383 362 385 0.90 11 13 9.9e-05 0.0065 17.3 0.7 2 23 391 412 390 412 0.96 12 13 5.7e-06 0.00037 21.2 3.0 1 20 418 437 418 440 0.93 13 13 6.8e-05 0.0045 17.8 5.5 1 23 446 469 446 469 0.96
Sequence Information
- Coding Sequence
- ATGATGTGCATTCTATGCAGGGAGACTTTCCCCAAAGCACCACAGTTCAGGCTTCACATGTCCAAAGAACACGAGACCTACCGCATACAAACGGCTTTCCGACACGTCCCAGTCGGACAAGTGAAAGTTGATATCACGGAACTTAAGTGTCGATTATGCTCATCGCCGTTCAATAGCCTCCAACAAATAGCAGATCACTTGATCATGGTTCATTCTAAAACGATAGATCTAGACAATGATCTAGGGTTGCAGCCATATCGCATAGAAGATGAAAAGTTGTCTTGTGCGGTGTGTCAACACAAGAGTTATAATATGAGAGCGTTAAGCAGACACACTGGATCGCATTTTAAAAAAAGATACATCTGCGAACATTGCGGAAAGGCTTACGAACTAAATCCGCTGGCCATCACCAGAAAGAACGCACGCACCATTATTGAGCATTCAACTGCATACCCATTTAGACTGCCGGAAAGTTTGATGATGTGCATACTGTGCAACAAGACTTTCTCAGAAGCAGCTGTGTTCAGACGTCACATGGACAAAGAACACACCGAATTCAATTTAACGATCACATTCTTGCACATGGCGGAAGGACAACTTAAAGTTGACATCACAGAATTGAATTGTCGAATATGCTCCTCGCCGTTCGATAGCCTTGACAAAATAGCTGATCACTTGATTACATCACATTCTAAATGCATAGATCTCGTCAACGATTTAGGATTGCAACCATATCGATTTGAAAACGAAAAATTTGCTTGTGCTGTTTGTCATCTCAAGGTAGCAAATCTTGTCGCTTTAAGCAGACACACTGGCAAACATTTTAGAAGCTTTATTTGCGAGCATTGCGGTAAATCGTATGCCGCGAAAGGTGCTCTAATGTATCATGTAAGATACTCGTGCTCTAAAGATGGTCAGACGCGATGCAGGAAATGTAGGAAGGTCGTTAGTTCAATCAATGATCATCTACAGACGTCCGAATTATGTAGGCGGCATATCTGTAACGTTTGCGGTGATAGGTTTTGGTCGTGGAATAGCAAACAGGAACACATGGAGTCTGCACACTCTGTACCTAAAAAGACTTATCCATGTCCTGAATGCGAGAACGTCTTTATTTCTAGCTGCCAGTTGAAGCATCATTTTAGTTTTACTCACTCCCATGATTACCTTGTATGCGTGCATTGTGGGCTGAAATTTGTAAATAAATATAAACTAGATCGGCACCTGATAGTGCATACTGGGGAAAAGGCATTCTGTTGCGATGTGTGTAATAAGAGTTTCAATAGGAAGTCGTCTTTGAATCAGCACATGTGGATTCACAGCGACATCAAGAGGCACAATTGTAAGATATGCGCAAAGTCTTTCAACCAGAAAGTGTGCCTAAAAGTTCATATGAAGACGCAACACCCGGAAATTATGGAAGATCTTACAGGAAAGATCCAAAACAGAGTCTCTTAA
- Protein Sequence
- MMCILCRETFPKAPQFRLHMSKEHETYRIQTAFRHVPVGQVKVDITELKCRLCSSPFNSLQQIADHLIMVHSKTIDLDNDLGLQPYRIEDEKLSCAVCQHKSYNMRALSRHTGSHFKKRYICEHCGKAYELNPLAITRKNARTIIEHSTAYPFRLPESLMMCILCNKTFSEAAVFRRHMDKEHTEFNLTITFLHMAEGQLKVDITELNCRICSSPFDSLDKIADHLITSHSKCIDLVNDLGLQPYRFENEKFACAVCHLKVANLVALSRHTGKHFRSFICEHCGKSYAAKGALMYHVRYSCSKDGQTRCRKCRKVVSSINDHLQTSELCRRHICNVCGDRFWSWNSKQEHMESAHSVPKKTYPCPECENVFISSCQLKHHFSFTHSHDYLVCVHCGLKFVNKYKLDRHLIVHTGEKAFCCDVCNKSFNRKSSLNQHMWIHSDIKRHNCKICAKSFNQKVCLKVHMKTQHPEIMEDLTGKIQNRVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -