Eins010747.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupithecia insigniata
Gene Symbol
mRpS10
Assembly
GCA_947859395.1
Location
OX402015.1:4629262-4637717[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.042 2.8 9.0 5.5 1 23 218 239 218 239 0.96
2 12 0.00098 0.064 14.1 0.9 2 23 246 267 245 267 0.98
3 12 1.6e-05 0.001 19.8 1.8 1 23 273 295 273 295 0.99
4 12 0.006 0.39 11.7 0.4 1 23 300 323 300 323 0.97
5 12 0.21 13 6.8 0.8 2 21 519 538 518 539 0.93
6 12 0.013 0.85 10.6 0.3 3 23 547 568 547 568 0.97
7 12 0.00011 0.0072 17.1 1.1 1 23 592 614 592 614 0.96
8 12 0.008 0.52 11.3 2.9 1 23 620 642 620 642 0.97
9 12 0.00074 0.049 14.5 1.0 1 23 648 670 648 670 0.99
10 12 1.9e-05 0.0013 19.5 1.0 1 23 676 698 676 698 0.99
11 12 0.00081 0.053 14.4 1.3 1 23 703 726 703 726 0.95
12 12 0.015 0.96 10.5 2.3 1 22 732 753 732 753 0.94

Sequence Information

Coding Sequence
ATGGTCGGAGCTATGAAACTCATGAAAATACTACATTGCAGAAGCCATGTTAGAGACAATTCTAGAAAGAGAAGTACGTCGCGCAAAGACAAATTCATTGACACGGACAATAACACTGATATGCAATATATTGATATAAAAATAGAACCTTTGGTTTACAATACAAATACATGCAGGGTTTGCCTTCAAGAAGGCAATATAGATATCTTTAGGGACAACACTTCAGAAGATCTATGTGATTCGATTTACATAATCGCTGGTATATACGTGACACATGCAGACCCTTATCCTAAATGTTTGTGTCAGTCTTGCCATGCCTTACTGCAAGGAGCTATTCTATTCAGAAGAACTGCACTTAAATCTCAGAGAATAATGATGAAGTTGGAATCTGATTCTGATCTCAAGACAGTGAAAAATGAAACACTGGAGGCCTGTGACGGGGATGCCATTGATGATGCTAATGGCTTTGCCAAAACTGTAGTTGAGGATGATGGCAGTATCTCTGGTGATGACCAGATAATTACAGAAAAAGGGAAATTTGACACACAAGAAGATCATCAGCTGTTTTATGAAAATAAAGATACCGCAAGTGAGATCCATAAGAACCTAGAAGAACGAAGACACAAGATACGAGCAAAAGTACCCTCCAAGTACATGTGTGATATATGTGGGAAGTTTTCAAATGAGCACCATTTTATGAAACATCGTTTAACACACTTCTACGACTTACCAGTTAAGTGTACCCTGTGTCCATACCGAGGCAGGTTCCAAGAGTCCCTGAAAATGCATATGAGGTCACACACTGGAGAAAGGCCATACCAATGTGAGCAATGCTCTGCCAGATTCATGAGTAAGAGTAATCTCAACAAGCACACATTAACTCATAAAGAACATAATTTCCGCTGCGAGGCATGCAGTAAAGGCTATTACACCAAAAGGGAGTTAGACTTACATATTAAAATTGACCACACAGGCTTAAAGGAGCATGTCTGTAGCGATGTGCAAGTTGGTAACGATAGCGGAGAAGGTACGTCGTCGTCTCAAAACGAGAAATTCGCCGAAGTTCATGTAAAAATAGAGCCGTTGGCCCACGATACGTGCAGAATATGCTTGAAAGAAGGCAAGTTGGCCATATTCGGGGCTAATGGCTCTGGGGCTCTGTGCAAATCTATTTACGAAATTGCGGGTGTAGATGTGACCTATGAAGACCCTTATCCTAAATCTTTGTGTCAGACTTGCTATGTCTTACTACAAGGCGCTATTCTGTTCAAAAGAACAGCACTTAGATCAGAGAGAAAACTGAAAAAGTTAGAACTCCATAGTGATGACGACGATGTCAAAGATGAAGCTGAAGAAAAAAATTCGGTTATGGAACAATTAAACAAACAAATACGGTTTGGTAACAGTGCACTCAAGGAGAGATTAATGAAAAAGGTAAAACCTGATCCCAATTTTGATATAGATGACTATGAAGTCTGCCCTGATAGTGATGCTATTAATGTAACAGAGAACAGAAAGACAAAAACTACACGGTCAAAAAAACGAAAATTAATAAAATGCTTATCTTGTGATGCAAACTTCTATACTTTTACAGAGTTCAGGAAACATAGAAAAGTTTGCAGGAAAATATCATTGGGTTGTGCAGTATGCAATGAAAAATTCAATAACTACCAAGACTTCGCAGACCATAGACGGATAGAACATGAAAAAAAATCACATAATAAAAAACCAGAAGTTACAAAAACTCCAAAGCCTCGCAAAGAGAGAGCTCCTCATGTGTGTGACATCTGTGGAAAAACATTTGCAACAAAGGGCATATTCACTCGACACAGATCAGTACACTTCAATGAAAAGCCATTCAAGTGCTCGATGTGTACTTACCAATGCAGGTTAAAAGCTGCTCTTAAAAGACATCAAGTGATACACTTCAATGACCTGCCATTTAAGTGTGCATTGTGTCCATACCGGAGCAGGTTGAAAGAATCTCTCACAATGCACATGCGGTCACATACAGGGGAGAAGCCCTATCAATGTGACCAATGTCCTTCCAGATTTGTTAGCCGGAGTAACCTGAGCAAACATGTGATGCGGCACAGGGAGCATAGCTTCTGTTGTGAAGTGTGCAGTAAAGGTTATTACACGAAAAGGGAATTAGAAGTTCATATCAAAGATGATCATACAGAGGGAAAGCGTCATGTTTGTAGATTCTGTGAAAAGTCATTTGCACATCGGAATGCTATGATGAAACATGAGCGGAAGAGTATCTGGCGCTGCGTACCCCTGGTTCAAAAGAGTTTTCCAGCCAGCTATGCTACATTGAGGACCCTAACATCAGTAACGCCTGATATAACCAAACCCACAGAAAATGTCCCACTCCCTACAATTGAATTGGACAAGTTGTACAAGCGGGTTGAATTGGAGATGAGAGGCATTGATCCTGCAGTTTTGTTGAGTTACTCTTGGTTCTGTGTGGCAGCTGCTTCTCATTTAGGCATTGAAGTAACCAAAAGTTGGGCTCTGAGAAAAGCAGAGAAAGAGCGCCTGACCCTTTTACGATGTGTTCACATTTACAAAAAACACCGAGTACAATATGAAGTCCGGTCTTACTTCAGATTTGTCCATCTTCAAAGGCTTACTGGTTCCACTTGTGACACATACTTAGAGTACATTCAGAGGAATCTACCAGAAGGTTGTGCGCTAAAGGTAACGAAGATTGAATGTCAGAGAAAACCGGAGCATCTAACACCACCTAGTCAATAA
Protein Sequence
MVGAMKLMKILHCRSHVRDNSRKRSTSRKDKFIDTDNNTDMQYIDIKIEPLVYNTNTCRVCLQEGNIDIFRDNTSEDLCDSIYIIAGIYVTHADPYPKCLCQSCHALLQGAILFRRTALKSQRIMMKLESDSDLKTVKNETLEACDGDAIDDANGFAKTVVEDDGSISGDDQIITEKGKFDTQEDHQLFYENKDTASEIHKNLEERRHKIRAKVPSKYMCDICGKFSNEHHFMKHRLTHFYDLPVKCTLCPYRGRFQESLKMHMRSHTGERPYQCEQCSARFMSKSNLNKHTLTHKEHNFRCEACSKGYYTKRELDLHIKIDHTGLKEHVCSDVQVGNDSGEGTSSSQNEKFAEVHVKIEPLAHDTCRICLKEGKLAIFGANGSGALCKSIYEIAGVDVTYEDPYPKSLCQTCYVLLQGAILFKRTALRSERKLKKLELHSDDDDVKDEAEEKNSVMEQLNKQIRFGNSALKERLMKKVKPDPNFDIDDYEVCPDSDAINVTENRKTKTTRSKKRKLIKCLSCDANFYTFTEFRKHRKVCRKISLGCAVCNEKFNNYQDFADHRRIEHEKKSHNKKPEVTKTPKPRKERAPHVCDICGKTFATKGIFTRHRSVHFNEKPFKCSMCTYQCRLKAALKRHQVIHFNDLPFKCALCPYRSRLKESLTMHMRSHTGEKPYQCDQCPSRFVSRSNLSKHVMRHREHSFCCEVCSKGYYTKRELEVHIKDDHTEGKRHVCRFCEKSFAHRNAMMKHERKSIWRCVPLVQKSFPASYATLRTLTSVTPDITKPTENVPLPTIELDKLYKRVELEMRGIDPAVLLSYSWFCVAAASHLGIEVTKSWALRKAEKERLTLLRCVHIYKKHRVQYEVRSYFRFVHLQRLTGSTCDTYLEYIQRNLPEGCALKVTKIECQRKPEHLTPPSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-