Eins023869.1
Basic Information
- Insect
- Eupithecia insigniata
- Gene Symbol
- -
- Assembly
- GCA_947859395.1
- Location
- OX402021.1:6159044-6165479[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.031 2 9.4 0.3 1 23 116 139 116 139 0.96 2 18 0.23 15 6.7 0.3 2 23 166 187 165 187 0.94 3 18 0.45 30 5.8 1.6 1 23 210 232 210 232 0.97 4 18 0.0023 0.15 13.0 0.2 1 21 236 256 236 257 0.91 5 18 0.0092 0.6 11.1 0.1 1 23 268 291 268 291 0.95 6 18 0.046 3 8.9 1.3 1 23 297 320 297 320 0.90 7 18 0.0053 0.35 11.8 1.9 1 23 327 350 327 350 0.88 8 18 0.0062 0.4 11.6 4.2 1 23 359 381 359 381 0.98 9 18 0.47 31 5.7 0.1 1 21 423 443 423 446 0.82 10 18 5.4e-05 0.0035 18.1 0.5 1 23 513 535 513 535 0.98 11 18 0.00047 0.031 15.2 0.3 2 23 540 561 539 561 0.95 12 18 0.46 30 5.7 0.1 1 21 604 624 604 627 0.82 13 18 2.5 1.6e+02 3.4 0.2 2 23 650 672 649 672 0.92 14 18 0.00017 0.011 16.5 1.9 1 23 694 716 694 716 0.98 15 18 0.0025 0.16 12.9 0.4 2 23 721 742 720 742 0.95 16 18 2.5e-05 0.0016 19.2 0.8 1 23 750 773 750 773 0.97 17 18 7.1e-05 0.0046 17.7 5.6 1 23 779 802 779 802 0.96 18 18 0.02 1.3 10.0 0.9 1 23 808 831 808 831 0.97
Sequence Information
- Coding Sequence
- ATGGCAGCTTCGTATTTGATGGTTAGACGCGCTTTCTCACTCATAGCGCGCCCCATTTCATTCGACGTGAAACAACAACAAATCCGTATAGGGCGGCCGCTGATATTTGCTGATATGATGATGATGATGAATAGTTCAGTTAATGAAGATCTATCAATATTAGGTGCGGCTAAACGGAAATTAAAAGAAAACGTTAGCGAACGTCAGATGCGTAGGCGTCGGCGAGCCAACAACGAGTTGCCGGAAGAATCGGAGAAACGAATCTCGAAGACTATGATGAGACGTAATGCTATGACCATTTTAGAGAACTCCACCGCCTGGGCTTTCCGTTGGTTCCATGGAGCTTTCTATTGCGCGTACTGTGACACTAAATACGTCGAAATAAAACTATTAAGAGAACACGTCGCTACCACTCATCTATACGAACCACCATCCAAAACAGTTTTCTCAAAACTAAAGGAGAGTAACATAGTTAAAATAGATATAAGCCAATTGCATTGCAGACTTTGCGATATTGGTCTAGAAGGCATATCAAATCTTAAAACACACATTAATTTACACGGGAAATACATACAAGAAAAATATGGCGATGGAGTTTTGCCGTTCAAACTGGATGATAGCAACGGTTTTCATTGCCAAATGTGCACATCCCAGTTCGCAACATTTGGCAAAATAAACATACACATGAACGCGCATTATCAGAACTACGTCTGCGACACGTGTGGGAAAGGATTTATTACAAAATCTAGGTTTAGGCCGCATATTCAATCGTGCTTTAATAATTTATCGGAAAAGGGGAATTTCGCTTGCGGAATATGCGATGAAATTTTTAGCTCTAGAGCAGAGCGTCTAAGCCATCGTTCGAAAGTCCATCGCAAGGGAGTCCGCTACAATTGCCCTCGGTGCTCTGAAGTATTCACGACATACCACGCAAGAGCCAATCATTTGGTAAACTTTCACGCGGAAAAAATCAAGGAATATGTCTGTAGTGTTTGTAATCAGTCTTTTACTACGAGCTCGAAACGAGCAGCACATTGCAGGCTTGTGCACAGATCTCCAGTGCAAAGCGAAAGCCACCAGTGCTACTACTGCTCCGCTCATTTCCCTAGCAAATGGAGACTTGGCCGGCATATGAGATCGCATGAACGAGACCCTGTCCGGAGATTTGATTGGATACCGAAGCGAAAGTACAACGATTACAGAGACAATGCAGCCCTTATTCTAGAATATTCCAACGTTTGTCCATTTAGGTGGCAACGAGGACTGTTCGTCTGCGGGATCTGCCCACAAAAATTTGCCAAGTTCGAACCTGTCAGAGAACATGTCGCAGCAAAGCATCCCAACAAAGTCGAGGCACTTAATCCTAAAAAAAAGGACTACCTTAAATGCGATATAACAGATCTTAAATGTATGATATGTCTCGCAAGCATAAAAGACATCAACGCTTTTGTTGAGCACTTAAAAGATGATCACGATAAGCCGATTGCAAACGACTTTGGTATGGGTATCATCCCCTATCGCTTAACCAATGCGTTGTACACTTGCACGTACTGCCCTGAAACCTTTAGCTTGTTCAACTCGTTAATCACCCACATCAACATCCACTACCCGAATTCTGTGTGTCCGATCTGCGGAAAGGCTTTCTCAAGCACCAGTAAAATGAACTTCCATGTGCAAACACACGGCATAGGAGACCCTGTCCGAAGAATTGGTTGCATACCGAAGCGAAAATACAACGACCACAGAGACAATGCAGCCCTTATTCTAGAATATTCCAACATTTGTCCATTTAGATGGCAACGAGGAATGTTCGTCTGTGGGATCTGCCCACAAAAATTCGCCAAGTTCGAACCTGTCAGAGAACATGTCGCAGCACAGCATCCTAACAAAGTCGAGGCAGTTAATCCTTTAATAAAACATTACTTAAAATGCGATATAACAGATCTTAAATGTATGATATGTCATGCAAGCATAAAAGACGTCAACGCTTTTGTTGAGCATTTAAAAGATGATCACAGTAAGCCACTTGTCAACGACTTTGGTATGGGTATCATCCCCTATCGCTTAACCACTGCGTTGTACACATGCACACACTGCCCTGAAACCTTTAACTTGTTCAACTCTTTGAACACCCACATCAACATCCACTACCCGAATTCTGTTTGTCCGGTCTGCGGAAAGGCTTTCTCAAACACCCGTAAAATGGACTTTCATATGCAAACACACGGCATAGGAACCAAAGGGTTTTACAAATGCTCCAAATGTGACGAGGTCTTCACTAGCCCATACGATAAACAAAAACACGTTATGTCGTTGCACACTAAACTGAAGAGGTACAGGTGCCCACATTGCGACGAGAGCTTCAAAAGCTATTCGCACAGGTTGAAACATATGAACGAATTTCACGATAGTAAAATAGTTTTCCCCTGTAGCCTATGCCCTGCTGTATTTACAATGCACAATATGAGGACAAAGCACATACAACGAATTCATACGAAGCAAAGAGTGTGA
- Protein Sequence
- MAASYLMVRRAFSLIARPISFDVKQQQIRIGRPLIFADMMMMMNSSVNEDLSILGAAKRKLKENVSERQMRRRRRANNELPEESEKRISKTMMRRNAMTILENSTAWAFRWFHGAFYCAYCDTKYVEIKLLREHVATTHLYEPPSKTVFSKLKESNIVKIDISQLHCRLCDIGLEGISNLKTHINLHGKYIQEKYGDGVLPFKLDDSNGFHCQMCTSQFATFGKINIHMNAHYQNYVCDTCGKGFITKSRFRPHIQSCFNNLSEKGNFACGICDEIFSSRAERLSHRSKVHRKGVRYNCPRCSEVFTTYHARANHLVNFHAEKIKEYVCSVCNQSFTTSSKRAAHCRLVHRSPVQSESHQCYYCSAHFPSKWRLGRHMRSHERDPVRRFDWIPKRKYNDYRDNAALILEYSNVCPFRWQRGLFVCGICPQKFAKFEPVREHVAAKHPNKVEALNPKKKDYLKCDITDLKCMICLASIKDINAFVEHLKDDHDKPIANDFGMGIIPYRLTNALYTCTYCPETFSLFNSLITHINIHYPNSVCPICGKAFSSTSKMNFHVQTHGIGDPVRRIGCIPKRKYNDHRDNAALILEYSNICPFRWQRGMFVCGICPQKFAKFEPVREHVAAQHPNKVEAVNPLIKHYLKCDITDLKCMICHASIKDVNAFVEHLKDDHSKPLVNDFGMGIIPYRLTTALYTCTHCPETFNLFNSLNTHINIHYPNSVCPVCGKAFSNTRKMDFHMQTHGIGTKGFYKCSKCDEVFTSPYDKQKHVMSLHTKLKRYRCPHCDESFKSYSHRLKHMNEFHDSKIVFPCSLCPAVFTMHNMRTKHIQRIHTKQRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -