Eins022805.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupithecia insigniata
Gene Symbol
-
Assembly
GCA_947859395.1
Location
OX402019.1:8438106-8462668[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.86 56 4.9 0.1 1 23 426 448 426 448 0.96
2 11 1.2e-05 0.00076 20.2 1.2 1 23 458 480 458 480 0.98
3 11 8.4e-07 5.5e-05 23.8 1.5 1 23 486 508 486 508 0.99
4 11 0.00092 0.06 14.2 4.3 1 23 515 537 515 537 0.99
5 11 1.7e-05 0.0011 19.7 0.7 1 23 543 565 543 565 0.97
6 11 6.1e-06 0.0004 21.1 0.4 1 23 571 593 571 593 0.97
7 11 2.4e-05 0.0016 19.2 1.9 1 23 599 622 599 622 0.95
8 11 4.6e-06 0.0003 21.5 1.1 1 23 628 651 628 651 0.95
9 11 2.1e-05 0.0014 19.4 2.8 2 23 658 679 657 679 0.97
10 11 3.2e-05 0.0021 18.8 1.1 1 23 685 707 685 707 0.97
11 11 0.017 1.1 10.3 0.0 1 21 713 733 713 737 0.91

Sequence Information

Coding Sequence
ATGAAAAGCTGTCTTGTATGCGGGTCCCAAGGACCGTTTGGGCGAGACTACATACTAAATGTATTTGATGAGAATAATACAACATGTGAAAGGAAATTAGCAGAAGCATTATGTGAGATGATTGAAAAGGAATTACACAAAGAGAGTGTACACACTACAATACTTTGCAAGGAGTGCCTTGATTTGTGCATTAACTATGATATGTACAGGGCTAACATGGCAATAATTAAGACTAAAATATCAGAGCAGTTCTATGAAACTTTAGAAAAACTTAATATTGCCATTGCAGCACCTGTCACCACACCTAAAAAGGAAATTAAAGGAAAGTTCGTGGTACCGGCTTCAAAGCTCCAACCGCTACCAGCGGATTACCAGCTCAATTTGGGAAAAATAGCAGCCCTGGCTTCTAGTACGCAAGCTAAGTCTCAAAAACCCCTGCTCAACTTAAAAGTAACTATCGGGAACTCTGTCCTAACACAGAGTCTAACGACATCTACCGTCAAGATGATGAAACCTACAGAGCTGTCAAACTCTAAACATATAAACGTCGAGTGGAATGATAGTCTGCCGAGTGAGATCTTCTCGAGTAATGATAATGATAATAATGGAAACGAGGATGTGGATATAGAAGTTGATGAAGAATCCCATGAGGTGGTACCAGTCTCCGAAAGCGATCACATTATGATTGATGCAAATACTATAAAGGACGAAAACTCTGAAAATTCCCAATACACAAACACAGAAAACTTTGAACTACTATACGAAGGGCAGGACGACGGTCAACCACATACAATAGTATTGGACAGCAACAGTTCGTTCCTACAAATGATGTCGTCTGGACAGAAGTTGGTTTACGAGAATGGAGAGATATCACTCGTTATGGATGATGATAATGATGAAGAGAATGATGAGGGACAAGATTCGAACGACGAAGAGTCTCAGATAGAGCTGCAAGTATCAGGAGATGAGGAAACTGCGAACGCCATCATAGCGGCTGCTCAGGAACAAGGTGGCGCCTTCATAAAAGTAGAAAGCGGTGAAATGTACCGAGTGAAATCAGTGCAGAGCCATCCATCAGACAGCGTGCCACAAACAGACAGACAAACAAACTCCGCCTCGGAACTAGTCAGAAGAGAAGGCGAGAGCACGACTTACACTTGCCTCGTGTGTCCGCATGCCTCAGGTCCTACTTCGAAGTCACAAGAGACAGGGAGCTTCACCTCGAAGGCACAGGAGATGGTACAACATATGAAATTCGCTCACTCGACCAAAGTTTACATATGTGCAAAGTGCGGCGATATCATGAGGAATCGCTCTGAGTATGTCTCGCATTTGGCCCGCCACGGCGCCGTCGCCACTAAACCTCGCTCCTACGACTGCGATCTATGCAATAAGAGCTACAACTCGCGGACACTACTGCAGGAGCACATGAACAGACACACAGGCAGCCGACCGTATCGCTGCCAAGTGTGCGACAAGTCGTTTGCATCCAAGTACACTATGACGGCGCATTTGAAGACGCATCAGGCTCGACCGCGCCCCTTCAAATGCGCCACTTGCCACAAGTCATTCCTCTCGCAGCAGAATCTGAATCAGCATGAGAAAACACATCTAGGGATCAAGAGCTTTATCTGCGGAACTTGTGATAAAGCCTTCGCCACACAGCACAGCCTAGAAAGCCACTACCTGGTCCACAGCGGGACCAAAAACCACGTTTGTGACACTTGTGACAAGGGTTTCGCCAGGCGTGCCGAACTTAGGGACCACGTTAGAATACATACAGGCGAGCGTCCATTCGCGTGCAATATTTGCGACGCTCGTTTCTCCCAGCGTTCGAACCTGCACTCGCACAAGCGAGCCACGCATCTCAACGACAAGCGACATGTCTGCCCTGAGTGTCCCAAGCGGTTCAAACGACGGAGACTCCTCCAATACCACATAAAGGCAGCGCACACGGGCGAGAGGCCTCTAGTCTGCGAACTCTGTCACACGACGTTCGTGTACCCCGAGCATTACAAGAAACATATGCGGATACACAGCGGAGAACGTCCGTACTACTGTGAGATCTGCGGCAAAGCTTTCAACTCCCGCGACAACAGAAATACGCACCGCTTCGTACACAGCGACAAGAAACCGTACGAATGTCTCGCGTGCGGCGCTTCTTATATGCGGAAACGGATGCTCGTCGCACATATGAACGCAAACGGTCATTTAGCAGAGTCAATAGTGGTGAACCAGCCTCGAGTTACGAGAGTCACTGAAGACCAACAGGGACAAAATAAAGCTGAAAGTGAAGATAACAGTGACGAAGATAATCACGAGGAAGAAGTTTCGGAATCAGCGAATGTGTTCTCATTAGTGGAAGACAAGGTGATAACAGACCCCACAGAGAATTGTATGATTACGGTCACTACGGACGGTATTGAGCCTCATGTTCAGATGACAAACGAGAACGGCAGCATTCTACAGTTTATACAAGTGAAGATGCCGGATGGTAAAGATGGATGGGTGGCTCTCAATGACTGA
Protein Sequence
MKSCLVCGSQGPFGRDYILNVFDENNTTCERKLAEALCEMIEKELHKESVHTTILCKECLDLCINYDMYRANMAIIKTKISEQFYETLEKLNIAIAAPVTTPKKEIKGKFVVPASKLQPLPADYQLNLGKIAALASSTQAKSQKPLLNLKVTIGNSVLTQSLTTSTVKMMKPTELSNSKHINVEWNDSLPSEIFSSNDNDNNGNEDVDIEVDEESHEVVPVSESDHIMIDANTIKDENSENSQYTNTENFELLYEGQDDGQPHTIVLDSNSSFLQMMSSGQKLVYENGEISLVMDDDNDEENDEGQDSNDEESQIELQVSGDEETANAIIAAAQEQGGAFIKVESGEMYRVKSVQSHPSDSVPQTDRQTNSASELVRREGESTTYTCLVCPHASGPTSKSQETGSFTSKAQEMVQHMKFAHSTKVYICAKCGDIMRNRSEYVSHLARHGAVATKPRSYDCDLCNKSYNSRTLLQEHMNRHTGSRPYRCQVCDKSFASKYTMTAHLKTHQARPRPFKCATCHKSFLSQQNLNQHEKTHLGIKSFICGTCDKAFATQHSLESHYLVHSGTKNHVCDTCDKGFARRAELRDHVRIHTGERPFACNICDARFSQRSNLHSHKRATHLNDKRHVCPECPKRFKRRRLLQYHIKAAHTGERPLVCELCHTTFVYPEHYKKHMRIHSGERPYYCEICGKAFNSRDNRNTHRFVHSDKKPYECLACGASYMRKRMLVAHMNANGHLAESIVVNQPRVTRVTEDQQGQNKAESEDNSDEDNHEEEVSESANVFSLVEDKVITDPTENCMITVTTDGIEPHVQMTNENGSILQFIQVKMPDGKDGWVALND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00702230;
90% Identity
-
80% Identity
-