Basic Information

Gene Symbol
rcor2
Assembly
GCA_947859395.1
Location
OX402007.1:5611156-5618354[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1e-09 1.3e-06 28.9 0.0 3 46 132 175 130 175 0.97
2 2 6.9e-12 8.3e-09 35.8 0.0 3 46 372 415 370 415 0.97

Sequence Information

Coding Sequence
ATGGTGTTGGCTGAGAGGAACAGCGATGTTCGAAACGGGAAGCGGTCAAGGGGGCCTAGCCCTAATGGCCATGGAAGTCCAGATTCTAGTTCCGAGGATGAGAACGTGGTACCATTTGCAGCTGAGAAAATAAGAGTGGGAAGAGACTACCAAGCTATTTGTCCAGAGTTGGAGCCTGTGGAAGCTCGGAAACCAGAAACTATAAATGATCGAGCTTTGTTGGTTTGGTCACCAACAGCTGATATATCAGACGTAAAATTGGATGAATATATAACAACGGCAAAGGAAAAATATGGATATAATGGAGAACAGGCTCTAGGAATGTTGTTTTGGCATAAACATGATTTGAGCAGAGCTTCATTAGACCTGGCGAATTTTACACCATTCCCCGATGAGTGGACAGTTGAAGATAAGGTGTTGTTTGAGCAAGCATTTCAATTCCATGGGAAGAGTTTTCACAGAATACGACAAATGTTGCCCGATAAATCAATAGCATCCTTGGTTAAATATTATTATTCATGGAAAAAAACAAGAGCTAGAGCCTCTTTGATGGATGTTGTCAGTGATGGTCGCAATGCAACAAGCTCCGGTGCTGGCAAACGGGAATCTGGGGCTGGGTCAGAACCAGGTGGCTCAGACAAAGAACAATCTGACAATGATGAGAAGGGCGAGGGCGGCGGCGATGCTGGGAAGACGTGCACCGTTTGCGGCATTCTGTGCAACCAGACCACGCCGCACAACTCGCAAAAGTTGTGTCAGGCATGCCTCGTGCACGCCAGACGCACGGGCACGATGAGGCCGCTGTGTGGGCCCGCGGGCCGGCGCGCGCCCGGCTCCAAGCAGCAGCGCTACAAGCACCGTCTGCCACGCGGCATTTACATCAATCACGACGATCTGGTGGCCATGGCCACGGGCCCGCAGCCCGGAGACCCTACCCCGCCCGGCCTTGTCAATCAGGGCGACGCCATGCTCAAAGCCATGGACAGAGAGATCGTATCACTCAAGAGACAAGTACAACAAAACAAGCAACAGCTGAGCGCGACGAAACGAAAAGTTTTAGATAGCGGGGTGGAAGAGCTGAGACCCGGGGAACCCCCTGCGAAGATCAATTCTCGCTGGACTAACGACGAACTTCTTATGGCTGTTACCGCTGTCCGGAAATACGGGAGGAATTTCCAAGCAATCGCGGAAACACTTGGCACAAAGACAGAGGCGCATGTCCGTTCCTTCTTTATCTCGTATCGCCGCCGCTACAACTTGGACGCTGTTGTTCGTGAACATGAAGCCGAAAGTGGAAAGACTCATCACATACAGGCTGGTGGCTCAAGTACAGACGCCAGTGAAAGCGCCGTTGATAGCACACCTACAAACAATGGAACTGTATCCCCTCAGTCCTCAACTAAAGATGAAAAGATGGAGATTGATAGCGAAGGCGTTGCCATCGGCGCTCCAGCGGAACAGGGTGGACCCCCCACCACCCCTCCCAAACACAAGCTGGCTGCTAAGTGA
Protein Sequence
MVLAERNSDVRNGKRSRGPSPNGHGSPDSSSEDENVVPFAAEKIRVGRDYQAICPELEPVEARKPETINDRALLVWSPTADISDVKLDEYITTAKEKYGYNGEQALGMLFWHKHDLSRASLDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRARASLMDVVSDGRNATSSGAGKRESGAGSEPGGSDKEQSDNDEKGEGGGDAGKTCTVCGILCNQTTPHNSQKLCQACLVHARRTGTMRPLCGPAGRRAPGSKQQRYKHRLPRGIYINHDDLVAMATGPQPGDPTPPGLVNQGDAMLKAMDREIVSLKRQVQQNKQQLSATKRKVLDSGVEELRPGEPPAKINSRWTNDELLMAVTAVRKYGRNFQAIAETLGTKTEAHVRSFFISYRRRYNLDAVVREHEAESGKTHHIQAGGSSTDASESAVDSTPTNNGTVSPQSSTKDEKMEIDSEGVAIGAPAEQGGPPTTPPKHKLAAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01099793;
90% Identity
iTF_01528238;
80% Identity
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