Eins023888.3
Basic Information
- Insect
- Eupithecia insigniata
- Gene Symbol
- -
- Assembly
- GCA_947859395.1
- Location
- OX402021.1:6383421-6384653[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-07 8.7e-05 22.6 0.0 4 41 18 56 15 60 0.82
Sequence Information
- Coding Sequence
- ATGGTGAAGGTTCGTCCTAGAAGGACAAATAAGGCTAACTGGTCTAAAGCCAAGCTGAAAAAGGCCATGGAGCTCATCGATAAAGAGGGTTATTCAATGAGAAATGCCGCGAAAACAATGGACATCCCATTTTCGACTCTTCAGAAGAGGTACGCTAAAAAAATATATAAGAAACCTCGTCTTGGACGTACAACTACCTTCACACCTGAAGTGGCAGAAGAACTCGCACAGGCCATCAAAAGAATGGCCAATGTGTTCTACGGGTGCACTGCTACTCAGGTAAGAAAGGCGGCATTTGAATATGCTGAAGCCCTGCAGCTGAAACATACCTTCAACAAGTTTTCAAGAATGGCTGGTCGTGTTTGGTTTGAGGGATTTGTTCGTAGGAATAATATTTCTGTGAGAAAGCCTGAAGCTACTAGgtgcacttcgtgtgggctgtgggctcactcagattgcactgggtgggacacagcctcaaattacgtctgtgatttgtgttga
- Protein Sequence
- MVKVRPRRTNKANWSKAKLKKAMELIDKEGYSMRNAAKTMDIPFSTLQKRYAKKIYKKPRLGRTTTFTPEVAEELAQAIKRMANVFYGCTATQVRKAAFEYAEALQLKHTFNKFSRMAGRVWFEGFVRRNNISVRKPEATRCTSCGLWAHSDCTGWDTASNYVCDLC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00697281; iTF_00700065;
- 90% Identity
- iTF_00697281;
- 80% Identity
- -