Eins008441.1
Basic Information
- Insect
- Eupithecia insigniata
- Gene Symbol
- -
- Assembly
- GCA_947859395.1
- Location
- OX402011.1:12436594-12437169[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-08 1.9e-05 24.7 0.1 3 41 18 55 16 59 0.92 2 2 5.8 2.4e+03 -1.3 0.0 23 30 101 108 101 108 0.86
Sequence Information
- Coding Sequence
- ATGGAAGAACCTGGACCACCAACTGTTAAAAAACGAGCACCCTGGACATCCACACAAATAGAGAATGCTGTCAAGGCAGTACAAAGAAATAATTTGTCACAGCATGCAGCTTCTAAACGGTTtattccgagaagaaccctgcggaaccatcttaagaccggatatcttaaaaggcaacttggacgtgcagcgacgttcaccacggaacaagaaaacgacttagccaaacgaatcatacgactagctgaagtaggaatgccaatgactcctaaaatgcttcgtctgcaggcgtatgctttttgccagaggtataacatacccaacatatttaacgatgcgaagtctttggcaggcagaaaatggctgaagctatttcttcaaagacacccggaaataagaaatcgcaaagctcaaatgatgaatcctgctagagcgcagaagctgaataaattcatagtgaaggatcacttcgagaaagccaaaaccttgatgcagaaactgatgatcgaaaacagaccagaatgcatctacaatatggatgaaaaaggttgccgtatttcactacatcaccaatag
- Protein Sequence
- MEEPGPPTVKKRAPWTSTQIENAVKAVQRNNLSQHAASKRFIPRRTLRNHLKTGYLKRQLGRAATFTTEQENDLAKRIIRLAEVGMPMTPKMLRLQAYAFCQRYNIPNIFNDAKSLAGRKWLKLFLQRHPEIRNRKAQMMNPARAQKLNKFIVKDHFEKAKTLMQKLMIENRPECIYNMDEKGCRISLHHQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -