Eins013160.1
Basic Information
- Insect
- Eupithecia insigniata
- Gene Symbol
- -
- Assembly
- GCA_947859395.1
- Location
- OX401995.1:10596992-10613826[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7e-09 2.4e-06 27.6 0.0 3 40 64 100 62 104 0.88 2 2 5.7e-09 2.4e-06 27.6 0.0 3 40 433 469 431 473 0.88
Sequence Information
- Coding Sequence
- ATGACGGACGATGCTATCTTGAAAAGCTTTATAAGAGTAGAAAAGCCTTGTCATGGACTCGGACATTCTTTGGTGGCGAACTTTCCGCTGATTCATAGGACTTTAGTGCAGAAGTTTTACGAGTTCCTTTTCATGGGGATGTCAGGAACTAGAAGTACGACTAAAAATCTGAAGGTGAAATGGGGCCAAGATGATTTAAATAGGGCATTCAAACATGTCGAAGAAGGGACCCCGATAAGAGAGGCAGCTCGGAAAAATGGCATCCCATTTTCTACCCTCCAAGAAAGACTAAAGAAGAAGAACTGTGAATTGCCAACTATGGGAAGAAATCCAGTGTTCACGAGAGAACAAGAAGCAGAAATGGCAGACCAGcctctggatgtttctatctatggtccattcaaaGCGGCCTACAAGCAGGAATGCAATCTTTTAATGAAAACTGAATTGGGACGAAGGATCACTCATAACGACATTGCTTCGCTTTTCAGAAAAGCTTTTCAAAAGATTGCAACCATCCCAAAAGCTGAAGCAGGCTATGCTGCTACAGGAATATATCCTCTGAATCCAAGCGTGTTCACAGATGAAGACTTTCTGGCTGCTGAAATTTTAAATAGCAGTGAATTGGTGGTATCGGTAGAAGAAAGGCGCGACCTGGACAATAAAACTCCTGAAGCTCAAATCATCCCATCTAGCATACAGCCCACCGATTCACACATAACAGCATCTAGTTCACCACCACTTCTCATCGACCACATCCAAACATCACCAGAAACTAGTGCTGTGGCATCTCCCAAAGTTCTGCAACCGATAATAGACAATGCTATTCCCTCAACTTCAGGAATTACCGTCAAAGATCTTCTACCAGTTCCAAAGAAACCCACAAATAACAAAAAAATGCAGGGAGCCTCACGAAAACAACATGCATCAGTCCTCACAAGCACTCCTTATAAGGAAGCTTTGATACAAAAAGAAGAGAGAAGAGCGACAAGGGAAAAGAAGAAAGAATCTGGTGCCAAAACAAAAGCAGGAATAAAGACAGCGAAAAAAAGACCAGCTAAATCTAATGTCATAAAGGTGAAAAAGAGAGTTCTCCAGGATAAGGATATGGACCAGAGTTCATCAGACTCTGAAATCGTCATGGCTGACGTACGTGATGACGATGATGACACTGATGTCGAAGATCTGGAGAATAAATGCATGTTATGTGACGAttatggtcggaataatgagctctggtatagGATGTCAGGAACTAGAAGTACGACTAAAAATCTGAAGGTGAAATGGGGCCAAGATGATTTAAATAGGGCATTCAAACATGTCGAAGAAGGGACCCCGATAAGAGAGGCAGCTCGGAAAAATGGCATCCCATTTTCTACCCTCCAAGAAAGACTAAAGAAGAAGAACTGTGAATTGCCAACTATGGGAAGAAATCCAGTGTTCACGAGAGAACAAGAAGCAGAAATGGCAGACCAGcctctggatgtttctatctatggtccattcaaaGCGGCCTACAAGCAGGAATGCAATCTTTTAATGAAAACTGAATTGGGACGAAGGATCACTCATAACGACATTGCTTCGCTTTTCAGAAAAGCTTTTCAAAAGATTGCAACCATCCCAAAAGCTGAAGCAGGCTATGCTGCTACAGGAATATATCCTCTGAATCCAAGCGTGTTCACAGATGAAGACTTTCTGGCTGCTGAAATTTTAAATAGCAGTGAATTGGTGGTATCGGTAGAAGAAAGGCGCGACCTGGACAATAAAACTCCTGAAGCTCAAATCATCCCATCTAGCATACAGCCCACCGATTCACACATAACAGCATCTAGTTCACCACCACTTCTCATCGACCACATCCAAACATCACCAGAAACTAGTGCTGTGGCATCTCCCAAAGTTCTGCAACCGATAATAGACAATGCTATTCCCTCAACTTCAGGAATTACCGTCAAAGATCTTCTACCAGTTCCAAAGAAACCCACAAATAACAAAAAAATGCAGGGAGCCTCACGAAAACAACATGCATCAGTCCTCACAAGCACTCCTTATAAGGAAGCTTTGATACAAAAAGAAGAGAGAAGAGCGACAAGGGAAAAGAAGAAAGAATCTGGTGCCAAAACAAAAGCAGGAATAAAGACAGCGAAAAAAAGACCAGCTAAATCTAATGTCATAAAGGTGAAAAAGAGAGTTCTCCAGGATAAGGATATGGACCAGAGTTCATCAGACTCTGAAATCGTCATGGCTGACGTACGTGATGACGATGATGACACTGATGTCGAAGATCTGGAGAATAAATGCATGTTATGTGACGAttatggtcggaataatgagctctggtatagGTACAGCAGCTTAGCAACCAACTTGCAAACTTTTGCTAAAGCTATCAAATTAGGAGGTACTTACTGA
- Protein Sequence
- MTDDAILKSFIRVEKPCHGLGHSLVANFPLIHRTLVQKFYEFLFMGMSGTRSTTKNLKVKWGQDDLNRAFKHVEEGTPIREAARKNGIPFSTLQERLKKKNCELPTMGRNPVFTREQEAEMADQPLDVSIYGPFKAAYKQECNLLMKTELGRRITHNDIASLFRKAFQKIATIPKAEAGYAATGIYPLNPSVFTDEDFLAAEILNSSELVVSVEERRDLDNKTPEAQIIPSSIQPTDSHITASSSPPLLIDHIQTSPETSAVASPKVLQPIIDNAIPSTSGITVKDLLPVPKKPTNNKKMQGASRKQHASVLTSTPYKEALIQKEERRATREKKKESGAKTKAGIKTAKKRPAKSNVIKVKKRVLQDKDMDQSSSDSEIVMADVRDDDDDTDVEDLENKCMLCDDYGRNNELWYRMSGTRSTTKNLKVKWGQDDLNRAFKHVEEGTPIREAARKNGIPFSTLQERLKKKNCELPTMGRNPVFTREQEAEMADQPLDVSIYGPFKAAYKQECNLLMKTELGRRITHNDIASLFRKAFQKIATIPKAEAGYAATGIYPLNPSVFTDEDFLAAEILNSSELVVSVEERRDLDNKTPEAQIIPSSIQPTDSHITASSSPPLLIDHIQTSPETSAVASPKVLQPIIDNAIPSTSGITVKDLLPVPKKPTNNKKMQGASRKQHASVLTSTPYKEALIQKEERRATREKKKESGAKTKAGIKTAKKRPAKSNVIKVKKRVLQDKDMDQSSSDSEIVMADVRDDDDDTDVEDLENKCMLCDDYGRNNELWYRYSSLATNLQTFAKAIKLGGTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -