Basic Information

Insect: Eupithecia exiguata
Gene Symbol: -
Assembly: GCA_947086465.1
Location: OX352256.1:4132079-4139920[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.064 4.1 8.3 1.1 2 23 408 429 407 429 0.93

2 15 0.00028 0.018 15.8 0.2 3 23 435 456 433 456 0.96

3 15 4.1 2.6e+02 2.6 0.0 5 21 464 480 462 481 0.90

4 15 0.00014 0.0091 16.7 0.2 2 23 489 511 489 511 0.91

5 15 0.038 2.4 9.1 2.7 1 23 518 541 518 541 0.94

6 15 2.3 1.4e+02 3.5 2.6 1 13 545 557 545 559 0.82

7 15 1.2 75 4.4 0.1 3 20 762 779 760 783 0.87

8 15 0.031 2 9.3 0.2 1 23 852 874 852 874 0.96

9 15 0.0023 0.15 12.9 0.1 3 23 880 901 878 901 0.94

10 15 0.051 3.3 8.6 0.7 2 23 1058 1079 1057 1079 0.90

11 15 2e-05 0.0013 19.3 0.5 1 23 1083 1106 1083 1106 0.96

12 15 0.032 2 9.3 1.4 1 20 1113 1132 1113 1134 0.93

13 15 0.013 0.84 10.5 0.4 1 23 1141 1164 1141 1164 0.93

14 15 0.23 15 6.6 4.1 1 23 1171 1194 1171 1194 0.91

15 15 0.0072 0.46 11.3 0.4 1 21 1199 1219 1199 1220 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.064	4.1	8.3	1.1	2	23	408	429	407	429	0.93
2	15	0.00028	0.018	15.8	0.2	3	23	435	456	433	456	0.96
3	15	4.1	2.6e+02	2.6	0.0	5	21	464	480	462	481	0.90
4	15	0.00014	0.0091	16.7	0.2	2	23	489	511	489	511	0.91
5	15	0.038	2.4	9.1	2.7	1	23	518	541	518	541	0.94
6	15	2.3	1.4e+02	3.5	2.6	1	13	545	557	545	559	0.82
7	15	1.2	75	4.4	0.1	3	20	762	779	760	783	0.87
8	15	0.031	2	9.3	0.2	1	23	852	874	852	874	0.96
9	15	0.0023	0.15	12.9	0.1	3	23	880	901	878	901	0.94
10	15	0.051	3.3	8.6	0.7	2	23	1058	1079	1057	1079	0.90
11	15	2e-05	0.0013	19.3	0.5	1	23	1083	1106	1083	1106	0.96
12	15	0.032	2	9.3	1.4	1	20	1113	1132	1113	1134	0.93
13	15	0.013	0.84	10.5	0.4	1	23	1141	1164	1141	1164	0.93
14	15	0.23	15	6.6	4.1	1	23	1171	1194	1171	1194	0.91
15	15	0.0072	0.46	11.3	0.4	1	21	1199	1219	1199	1220	0.95

Sequence Information

Coding Sequence: ATGCGAAGCGGGAGCGTCAACCACGCGAAAAAAGTTCCGGCATCACGGTCTCGTGTGCAAGGCTCCATTGCAGCGTCCGGCGCGCGGCTTACGTTCCCGTCCCGCCTGTTTTTTGCGCAGCATAAGAACACGGCGCTTTCTTTTCTAGATGAAGAATGGACGAGCGCAGATGTGAAGATTGAGATTCCTGTTGAATTCGAAAATAGCGTTGGTGCTAGTAATGAATGGATCACAACCGATTCAACGGATCATGCCAATACGGATGTCTCTAAAGCCAAACAAGAACATTGTAATACGGTAGATGACGAATGGGCTATACTCCCTCTTAATGCTGCAGAACACCCTCCGCCTGTAAAACCTAACTATTACCTAGATGACGACGGCACCGAGTGGATTATCACTGACACCGTAAATACAGACACGGTCCAGAATAGCCCCAATTTTAATAACACACGAACAAAGACACACCAACAAAACTCGAATCCTGCGCCAAACGTTTCAAGAGTCTGCAAGCCCGATTCTAAATTGACGCGAACTGTGAGACACCAACAAAATAACATGGACGGATATCGATTTGTTTCTGAACTTGCGCCAAAACTTGATAAGCCCGCTTCTAAATTGACACGAAACTGCAGGCGAGAAATCATAAAAGGATATCGCTTCGTCACAAACCCTGCGCCAGCCGTTTCAGGAGTTGACCAGTTGAAATTAAAAGGATATCGGTTCGTCTCCAATCCTGCGCCAGCTGTTTCAGGGGTTGATCAGTTGAAATGGAACCGCGTTCGCATCCAAGGAGCTGGTGAAATGTGGCTAAAGACTTCCAAAAAACCTAGACCGTTGCTGGATATATCGACCCTTAGCAAAGCAGATCAAAACGCTGTGCTCTTAGTGCGTAACACTACAGCAATCCCTTATAGAATAGAGAATGTTAGATCAATTATTCCATGCTTTGCTTGCGGGCATAAATTCCTTGACCCTTTTCTATTCAAAGACCATTTCATTGCCGAACATCAATCGGTGGACAAGGCCAATGGCCTTTATAGTAAAAACAGGATACAGACGCGTGTCGATATAACGGACCTAAGCTGCCTCTTATGTACGCAACAGCTTGACAATTTAGACGAAGCTGCGGCACATCTTGTTCAGATGCACAAAATGGGGATAGATCTGAACGAGAAGCTCGGTCTGGTGCCGCTCAAGTTCTCAGATAGGGGACTGTGTCAATGCGCTGTCTGCGGAATTAAGTTTAGTGCATTCAGAGAATTGTACAGGCACTCTGGCACACATTTCGCGAATCAGATCTGTGAGGTGTGTGGCATGCAGTTTGAGACACCCTATACATTAAATTTGCATGTAAAAACAAAGCATGCTAAGGGACGGTTATGTATTAAGTGCAAAGCTATATTCCCTACCGGCGAGGAGCTAAGGCGACACGTAAAGGAAGAACGCTCTTGCAGTAATGGTTACTGCAAAATTTGCGATAAAGCCTTCGGTTACTGGCAGTCATTGCAGAAGCACAGAGAAGCTGAGCACGGTGCTGAAAAAAGGGTTTATACATGTTCAGTGTGTCAAAAAGTGTTCGAGAAACGCATGCAGATGTATTTGCATTTCAAACAAAAGCATACAGATTCTTACAAGTGTAAAATATGCAACAAAAAGGTTTGCGGGTCTTCAGATGAAGAATGGACGACCACAGATGTGAACATAGAGATACCTGCTGAATTAGAAAATAGCAATGGTCCTAGTAATGAATGGATCACGACTGATTCAGCGGATTATGTCAATACCGATGTCTCTAAAGGCAAACAAGATTATTGTAAATCCGTAGATGACGAATGGGTTACACTCCCGGTTAATGCTGCAGAACATCCTCCAGGTGTAAAAACAAACAATAAACTAGACAACGACGACAGCACCGAATGGGTAATCACTGATATTGTAAAGCATGCAGACACAGTTCAGACTAAAAAGTCTCTATCAAAAAGACACATGAGACACCAACAAATCAACATGGAAGGATATGAATTCGTCTCTAAACCTAGAGTTGACTTACTCGCTTCTAAATTGAAACGAGCTAGGAAAACTCAACAACAAAAGAAAAGGAGAGAAAATCTAAAATGGGACCGCATTCGTATCGATCGGTTCGGTCTTGGTGAAATGTGGCTTAAGGTGCCCAAAAAACCAAAGGCGTTATTGGATACTAGGGATAAAAACGCTGTGCTCCTACTTCGTCATACTACAGCAATCCCTTGTAGAATGGAAAACCTGAAATCGATCATTCCATGCTTTGCTTGCGATCAGAAATTTCCTGACCCTTTCCTATTCAGAGACCATTTCGTTGCAGAGCACTCATCGGTGGACAAGGTTATTGGCTTTTACAGTAAAATCATCAAAACGCGGGTCGATATAACAGACCTAAGCTGCCTCTTATGTACGCGACCGCTTGATAATTTAGACGAAGCGGCGGCACATCTTGTCAAGGAGCACCAAATAGAAATCAATCTAAAGGAGAAGCTTGGTCTGGTGCCGCTCAAATTCCCAGAAAGGGGACTGTATCAATGCGCTGTTTGCGGTATAAAAGTTGTTACCTTCAGAGAATTGTACAGGCACTCTGGCACACATTTCGCGAATCAGATCTGTGAGGTGTGTGGCATGCAATTCGAGACACCGAATACTTTAAAAGTACATGCCGATACAAAGCATATTAAGGGACGGTTATGTAAAAAGTGCAAGGTTGTATTCCCGTCCGACAAGGAGCTGAGCCAACAAATAAAAGAAGTACGCACTTGCAATCCAGAATCGAAATACCCGAATGCGTCTGCAGCAAAGCGCAACGCCGAGTTAATAGTGAAACATGCGACAGTGTACCCGTTCAGGCTTCCCGAGAACTGTATGGTCTGTGTGTTCTGCTGTGAGGGTTTCGAGGACTGCGCTGTCTTTCGCAGCCACATGGAGCAGGACCATCAGGCGTTCCCCGTCAAAATGGCCTTCTCACACTGCTCTGAAGGCTTTGTAAAAGCCGACTGCTCCGATATCCGATGCCGAATCTGCTCCGAACAAAGCACATATAGCTCCCTTGAGGATATAGCTGTCCATTTGCGAAAAGTCCACAACAAACCGTTACATCTGTCAGACCCTTTAGGTTTACAACCATTTAAACCTGACAAGCTAACGTGCGTGCTATGCGGAGCGAAATCCTTCAGCCTCAGGCAGCTCAGTCGACACACGCAAACACACTTCCTCAGATTCCAATGCGAGTCCTGCGGCAAGTCTTACGCCACAAATACAGCTCTACAAGTACACATAAAATTTACGCACTTGATGAAAAAAGAACAATATTTCTGTAGGAAATGTAGGAAAATGTTCAACTCGCAGGATGAAAGGAGAAATCATACTCTGGAGACGAAGAAATGCTGGCCTTATTTGTGCCACATGTGCGGCGAAAGATATGTGTCTTGGAACGCGAAACAGGTGCATTTGAAGGACGTCCACGGCTTAGAAGACGGTCCCCACACCTGCCCGGAGTGTGGCAAGCTTTTCAGAGAAAAAAAAGCTTGCCAGGATCACTTTAAAATTACACACACGGACGATAATTATGTCTGTTCTTTTTGTGGTTTGAAGTTCATTTCCAAAAATCTTTACGATGAgcacatgAATCGAATAACCCGAATCCGTCTGCGGCGAGGCTCAACGCAAAGTTAA
Protein Sequence: MRSGSVNHAKKVPASRSRVQGSIAASGARLTFPSRLFFAQHKNTALSFLDEEWTSADVKIEIPVEFENSVGASNEWITTDSTDHANTDVSKAKQEHCNTVDDEWAILPLNAAEHPPPVKPNYYLDDDGTEWIITDTVNTDTVQNSPNFNNTRTKTHQQNSNPAPNVSRVCKPDSKLTRTVRHQQNNMDGYRFVSELAPKLDKPASKLTRNCRREIIKGYRFVTNPAPAVSGVDQLKLKGYRFVSNPAPAVSGVDQLKWNRVRIQGAGEMWLKTSKKPRPLLDISTLSKADQNAVLLVRNTTAIPYRIENVRSIIPCFACGHKFLDPFLFKDHFIAEHQSVDKANGLYSKNRIQTRVDITDLSCLLCTQQLDNLDEAAAHLVQMHKMGIDLNEKLGLVPLKFSDRGLCQCAVCGIKFSAFRELYRHSGTHFANQICEVCGMQFETPYTLNLHVKTKHAKGRLCIKCKAIFPTGEELRRHVKEERSCSNGYCKICDKAFGYWQSLQKHREAEHGAEKRVYTCSVCQKVFEKRMQMYLHFKQKHTDSYKCKICNKKVCGSSDEEWTTTDVNIEIPAELENSNGPSNEWITTDSADYVNTDVSKGKQDYCKSVDDEWVTLPVNAAEHPPGVKTNNKLDNDDSTEWVITDIVKHADTVQTKKSLSKRHMRHQQINMEGYEFVSKPRVDLLASKLKRARKTQQQKKRRENLKWDRIRIDRFGLGEMWLKVPKKPKALLDTRDKNAVLLLRHTTAIPCRMENLKSIIPCFACDQKFPDPFLFRDHFVAEHSSVDKVIGFYSKIIKTRVDITDLSCLLCTRPLDNLDEAAAHLVKEHQIEINLKEKLGLVPLKFPERGLYQCAVCGIKVVTFRELYRHSGTHFANQICEVCGMQFETPNTLKVHADTKHIKGRLCKKCKVVFPSDKELSQQIKEVRTCNPESKYPNASAAKRNAELIVKHATVYPFRLPENCMVCVFCCEGFEDCAVFRSHMEQDHQAFPVKMAFSHCSEGFVKADCSDIRCRICSEQSTYSSLEDIAVHLRKVHNKPLHLSDPLGLQPFKPDKLTCVLCGAKSFSLRQLSRHTQTHFLRFQCESCGKSYATNTALQVHIKFTHLMKKEQYFCRKCRKMFNSQDERRNHTLETKKCWPYLCHMCGERYVSWNAKQVHLKDVHGLEDGPHTCPECGKLFREKKACQDHFKITHTDDNYVCSFCGLKFISKNLYDEHMNRITRIRLRRGSTQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -