Basic Information

Insect: Eupithecia exiguata
Gene Symbol: -
Assembly: GCA_947086465.1
Location: OX352256.1:5354793-5361443[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.33 21 6.1 0.4 1 19 50 68 50 70 0.95

2 16 7.2 4.6e+02 1.9 0.1 2 23 100 122 100 122 0.87

3 16 0.41 26 5.8 0.2 5 23 148 167 145 167 0.91

4 16 0.12 7.4 7.5 0.0 2 23 172 194 172 194 0.95

5 16 0.0014 0.086 13.6 3.0 2 23 198 220 197 220 0.93

6 16 0.084 5.4 8.0 0.3 2 23 225 247 224 247 0.93

7 16 0.0029 0.18 12.6 0.5 2 21 255 274 254 275 0.92

8 16 0.006 0.38 11.6 0.7 2 23 384 406 383 406 0.93

9 16 1.3 85 4.2 1.7 2 23 429 451 428 451 0.91

10 16 0.00046 0.029 15.1 0.1 1 23 458 481 458 481 0.94

11 16 0.0015 0.098 13.4 2.0 2 23 487 509 487 509 0.97

12 16 0.0021 0.13 13.0 0.1 2 23 515 537 514 537 0.95

13 16 0.0011 0.073 13.8 0.9 1 23 544 567 544 567 0.96

14 16 0.011 0.72 10.7 0.9 1 23 573 595 573 595 0.94

15 16 3.9e-05 0.0025 18.5 1.8 1 23 601 623 601 623 0.98

16 16 2.8e-05 0.0018 18.9 2.5 1 23 629 651 629 652 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.33	21	6.1	0.4	1	19	50	68	50	70	0.95
2	16	7.2	4.6e+02	1.9	0.1	2	23	100	122	100	122	0.87
3	16	0.41	26	5.8	0.2	5	23	148	167	145	167	0.91
4	16	0.12	7.4	7.5	0.0	2	23	172	194	172	194	0.95
5	16	0.0014	0.086	13.6	3.0	2	23	198	220	197	220	0.93
6	16	0.084	5.4	8.0	0.3	2	23	225	247	224	247	0.93
7	16	0.0029	0.18	12.6	0.5	2	21	255	274	254	275	0.92
8	16	0.006	0.38	11.6	0.7	2	23	384	406	383	406	0.93
9	16	1.3	85	4.2	1.7	2	23	429	451	428	451	0.91
10	16	0.00046	0.029	15.1	0.1	1	23	458	481	458	481	0.94
11	16	0.0015	0.098	13.4	2.0	2	23	487	509	487	509	0.97
12	16	0.0021	0.13	13.0	0.1	2	23	515	537	514	537	0.95
13	16	0.0011	0.073	13.8	0.9	1	23	544	567	544	567	0.96
14	16	0.011	0.72	10.7	0.9	1	23	573	595	573	595	0.94
15	16	3.9e-05	0.0025	18.5	1.8	1	23	601	623	601	623	0.98
16	16	2.8e-05	0.0018	18.9	2.5	1	23	629	651	629	652	0.95

Sequence Information

Coding Sequence: ATGCCGGGTACAGACCAAGCGAGCGAATGCAAACGATTGGGTTTGACAATCGACGACGCATTGAAGAACGAACAGCAACTTGCAGTGTTGCTAATCACCATTATCCAGAATTCCACCATCATACCGTTTCGATGGTACCACGGAAAGTTCATGTGCTTTTACTGCCCCACAAAACTATCCAGTACTAAAGGACTGCGGGAGCATAACCTATGTGGACACAGCGAGATTAACATAACAGAAATAATAACTAAGTTCGTTTACAACGGCAGACGAATAAAATTAGACACTGGATTCGCGAAATGCAATCAATGCGATGATGAGATCTACGATATATCAGACTTTATCGAGCACTTATCGATTACCCATAACGTTAGTTACGATCCGGATGTCGCAAGGCATTTTATATCCTTCCGTTTATCCGATGATGAAATGAGCTGTATCGAATGCGATGAGAAATTCAGATATTTCGGTCCCTTGCTGGTTCATACGAACAGAATACATTTAGACAAACGTGTCTGCGAAATTTGCGGGCAGGGTGTCGCTGGAAAAGCGAATATCTTGAATCATGTGCGACAAATGCACGGCCTGAAGACTTGCAAGCATTGCAACGAAACCTTTCAAACTCAGTACGCGTTGCTGCAACACGTGTCTTACAAACATACGGACACGTTGAAATGTAGTATATGTGGTGAAATTCAACAGAATAGATATAAAATGAAGCGTCATATGGCTCTAGTGCACAATTGTAAAGAGTCTCAGATCGTTTGCGAATACTGTTCGAAGATATTCACTAGAAATAATAAATACGTGCAGCATAAACAACGAGTTCTGCCCATCATCACAAACACGTTTATGAAGACGCCAGAAGCCGAAGACGAAACCTACGTCACCGCTGTCATGGAAAAGATGTTAGAACTACAAAGAAAAGAAGATCTCGTGACCCTTATGTCGTCTATCATAGAAAACTCAACAGCTGTGCCATTCCGATGGCATTGCAGCAAATTCGCTTGCTTCTTCTGCTGCTTCCCATTCGAAGAGAGTTCTAAACTCAAGTCCCACTATTACGAAGAACACAGCGACGCGAAAATACGCAGCACATTCCGATCCGTCATCAAAAACAGCAAAGTTAAACTTGAAATTTCGAACCTAACTTGCAAGAAATGTTCGAAAACCTTCACAATACTTAACGATTTCATCGATCACCTTGTTAAAATTCATTCTCTAAAGTTGAATCTCGAAATGAAGCATCAGATCTTTGCGTACAAACTCTCGGATGAGAGTATGCAGTGCTTGCAATGCGGCGACGAGTTTCGGTTCTTCGGGACGCTCTTAAAACATACACACGCGAAACATAACACTACAAACGAAGCCTTCTTATGCGAAATCTGCGGGCAGGCCTTCGTAACAAAAACAAGCGTAGCGAGCCATGTCAAATCAGTCCACTCGCAAGACAACGCGACCTGCGATAAATGCAACATAGCGTTCAAAAACGTAAACGCGCTCCAGTTGCATCACAGACGAACGCACCGCACTTACATGCTAAAATGTCCGAAATGCCCAGAAGTTCTAACGAGCCCGTATCTAAGAAAACGGCATCTAGCGAAAGTCCACGATGTGAAGCGCTTTCAGTACGAATGCGACATGTGTAATTTCGTCTTCACGCTCAAAAGCAGGCTTATATCCCACAAGTCTAGAGTGCATATGAAAGAACGTAGCTACAGCTGTGAATTCTGCGCGTACAAAGCCTTCAATAAAGAAAGTTTGACGCGCCATATGGTCTCCCACGATGATTCCCGACCATTCCCATGTGAGTTTTGCAAAAAAGCGTTTCAGAGGAAGAAAACTCTAGAGTTACATAGGCGAATTCACACGAACGATAGAAGGTACATCTGCAGGGAGTGTAACAAAGCCTTTGTGCAGTACACGAGTCTGAAACTTCATTACAGAGTGCATCATTCGAAAGAACCGTCTGGTTTGGAAGGGCAGTGGCTGCCGCGGCATTGA
Protein Sequence: MPGTDQASECKRLGLTIDDALKNEQQLAVLLITIIQNSTIIPFRWYHGKFMCFYCPTKLSSTKGLREHNLCGHSEINITEIITKFVYNGRRIKLDTGFAKCNQCDDEIYDISDFIEHLSITHNVSYDPDVARHFISFRLSDDEMSCIECDEKFRYFGPLLVHTNRIHLDKRVCEICGQGVAGKANILNHVRQMHGLKTCKHCNETFQTQYALLQHVSYKHTDTLKCSICGEIQQNRYKMKRHMALVHNCKESQIVCEYCSKIFTRNNKYVQHKQRVLPIITNTFMKTPEAEDETYVTAVMEKMLELQRKEDLVTLMSSIIENSTAVPFRWHCSKFACFFCCFPFEESSKLKSHYYEEHSDAKIRSTFRSVIKNSKVKLEISNLTCKKCSKTFTILNDFIDHLVKIHSLKLNLEMKHQIFAYKLSDESMQCLQCGDEFRFFGTLLKHTHAKHNTTNEAFLCEICGQAFVTKTSVASHVKSVHSQDNATCDKCNIAFKNVNALQLHHRRTHRTYMLKCPKCPEVLTSPYLRKRHLAKVHDVKRFQYECDMCNFVFTLKSRLISHKSRVHMKERSYSCEFCAYKAFNKESLTRHMVSHDDSRPFPCEFCKKAFQRKKTLELHRRIHTNDRRYICRECNKAFVQYTSLKLHYRVHHSKEPSGLEGQWLPRH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01161683;
90% Identity: -
80% Identity: -