Eexi000511.1
Basic Information
- Insect
- Eupithecia exiguata
- Gene Symbol
- -
- Assembly
- GCA_947086465.1
- Location
- OX352255.1:1473780-1501674[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.11 7.2 7.6 0.4 1 22 223 244 223 246 0.90 2 22 0.048 3.1 8.7 0.7 1 23 279 302 279 302 0.96 3 22 0.065 4.2 8.3 0.4 2 21 315 334 315 339 0.93 4 22 0.007 0.45 11.4 0.0 3 23 349 370 347 370 0.95 5 22 0.02 1.2 9.9 0.5 2 23 390 412 389 412 0.94 6 22 0.0026 0.16 12.7 1.2 3 23 430 450 428 450 0.89 7 22 0.028 1.8 9.5 2.5 1 23 456 478 456 478 0.92 8 22 5.2e-06 0.00033 21.2 0.6 2 22 484 504 484 504 0.95 9 22 0.012 0.76 10.6 0.8 1 23 776 798 776 798 0.97 10 22 0.0051 0.32 11.8 0.5 2 23 806 828 805 828 0.94 11 22 0.0019 0.12 13.1 0.2 1 23 859 882 859 882 0.95 12 22 2.1 1.3e+02 3.6 1.0 1 21 886 906 886 909 0.80 13 22 0.17 11 7.0 0.1 2 23 921 943 920 943 0.94 14 22 0.0032 0.21 12.4 2.9 1 20 949 968 949 973 0.94 15 22 3.7e-05 0.0024 18.5 1.8 2 23 998 1020 998 1020 0.96 16 22 0.77 49 4.9 0.4 2 22 1027 1047 1026 1050 0.89 17 22 0.4 26 5.8 0.2 3 12 1117 1126 1115 1129 0.82 18 22 0.4 26 5.8 0.2 3 12 1158 1167 1156 1170 0.82 19 22 0.019 1.2 10.0 0.8 5 23 1283 1301 1282 1301 0.96 20 22 0.0023 0.14 12.9 1.2 1 23 1307 1329 1307 1329 0.97 21 22 5.1e-05 0.0033 18.1 1.6 2 23 1335 1356 1335 1356 0.98 22 22 0.0024 0.15 12.8 0.3 1 23 1362 1385 1362 1385 0.96
Sequence Information
- Coding Sequence
- ATGCCTATTTACCAAATATGTCGTGTGTGTTTACGAACTGATTTGGAATTACGAAACCTGGATAGTCCGGTTTTGGATTTATTCCTAGAATTTTGCGGGAAAACAAATAGACCCGTATTGTCTGATCTGCACAAAAGCATCCCACTGAGTACCTATAGCATATTTAGTCAAGACTTAAAAAATATTAATATAACCAAAGAATCAGGAGACATCGAAATCAGTATTAAAGTAGAGAAACACGAAGATAATCATAGCGATGGAATAAAAATTGATGATAATGATGAATATACAAATGACCATGCTAAAATTGATGATGATTTGAATGATAATGACACTGATGATGATAAGTGTCTGATAAATTTTGTTAAGAAAGGTGTGAAAATTAAAAAGAAAAAGAGTGAAAGTTCGAGCCTTGATATTCCAGTTAAAACAAATCCAAAGAAGCAAAAGCCTCGGAGGCCCCTAAAGGACCATGAAGAATACGAAAGCGTATTCGACATCCAATTGTTCAGTACCGATGCTGAGATCCGACGCGAGTTTGCCGCTAGGAAGACTTCTCCTAGATATATGGAGGCGCCACACAAATGTGATATCTGCTACACAGTGTACAAGTGCCAGAAGCTAGCCGAATTCCACATGAAGTGGCATCTCCCGTCAGCGGGTGAATTCCCTTGCGACGTTTGTGCTATGCGTTTCAAGTCTCACCCTGCGATGCGCAAACACAAGGCTGATGTGCACTACGGACGGTTTGCTTGCAAGAAGTGCCCTCTCATCACGTATCACAGTCACAGTTCGACCTACATGTCTCACCTCCGTAAGTCTCACCGCACTGAGCATGTCTGTGTGACTTGCGCGCAGACCTTCGTGTCCGAGAAAGGACTCTCTGTGCATCGGAAGAAGGTCCATAATGCTTCTAGTAAGTTCGACGCTAACGGCACGGCCCGCTGCTCGCAGTGCGACCTGACGTTCGCGAACCAGCAAGTGTACACCGTGCATCTCATGAACACCGACAAACATAAGGACAAGGCTGAGGCGCTTATAGCGTGTCCGGAATGCGGTATCCAGTTCCCGGACAAGCTGGCGGTGCGCGCGCATCGGCGCGAGATGCACCCGCAATACAACTACAGCGCGATGAAGCGTGCCGAGAGCGGACAGCCGCTAGGCCAAGTATGTCCCTTGTGTGGTGCATCAGGAACTCACAACACCTGGCTGTACCGCCACTTCCGCGAGTCCCACCCCACGCACAACTACGAGCAGTGCGTGGCCAGCGAGCGACGCAAGCATCTCTGTGACCAGTGCGGGAAGAGTTTCTATAATATAACACAGCTGAAGGAGCATGCGTTTGCACACGCGGGGCTAAAGCCGTTCCGATGTGACCAGTGTCCCGCCGCCTTTAGCTCCAAGACACATCTTAAGTTTCATTCGGAGCGGCACGCACCACCGCGCCGCGAATGTTCTCACTGCGGTAAAAAATTTGTTAGCGCAGCCAACCTTTCGAACCATATGAGGAAAAACCTGGACGGTTTTGACATCTCATCTGATACCCTCAAAAATGAACACAATGCACCGAAATGGCCGGATGCCAAGGATAAGGAAAATAGAGAAACATTGTGGCCGGAAAACAAGCAAACTGAAAATACTGAACCAGAATGGCCAGAAGATAAGCTACCCCAGCCTGACAGCCCGAAAATCAAAATCGAATGTACAGAAAATGCGATTTTAAACATTGAACTAAAACCGGAGATAGAACAAGAAGGTATTACATTTAAAGTTTTAGACAATTACTACTGCAGTGATATCTTTAACAACTACAATGATGATGATGAAGATTATAGACCTCAGAAAAGAAAGAAAAAACAAAAGAAAGAAAAAGTAAAAGAAAATAACAAATACAGCAAAGAAACAAGTAATAAAAACAAACTTAGTAATGAAACAATTCACAAAAACAAACTCAGCAAAATAACAAGTGGAAAGAACAAACTTAGCAAAGAACAAACAAGTAAGAACAAGCTGAGAGATAGAATGTTGGAATTGTTAGAGCAAGATGAATTTAAAGATTTAGGTGAGGGCATTGAGATTGACAAGGACCTATTCCTAAAAATATTTAATAAATCTAAAATTGGAAGTGTGCGGTGTACATTATTACTGCAAAACCCAGATACAAAAGAAGAAATAGAATGCTTAAAAAAGTTCCTCCTACACATTCTTAAAAAGAACAATCCAGAATATGAAGAGATGTTTGACATTGAGAGATTAGACACAGAAGAGCTTAAACTACAAGAGTTCAGTGCAAGGAAGCTCAGTAAGGAGTATTTAGAGGCGGAATTCAAATGTGAAGTTTGTTATAAAGTGTTTGATGCGCAGAGACTTTTGGATTATCACAGGAAGTGGCATGCGCCTACGCCCGGTTCCATCTCATGCACAATTTGCTTGATGCGGTTCGCTCGCCGCAAGTCGCTCGCTCAACATCTGAAGGACAACCACTGCGCTGTCTACCGCTGCAAGCTGTGTCCGCTGCTGACTTACAGCTTTTCTGTGATGGTGAATCACTTTCATCACCACAAAGGCAAAGAGTATCCGTGTCCTGTGTGCTTGAGTGTGTTTAGCAATAAAAGTACAATGAACAACCACAGACTGCAAGCGCACAGGACCGCGCATATTTGCCCGCTATGCGCGCGGAGCTTCGTGTCAGAGAAAGGGCTTTACTTTCACAAGCAACTCAAACACAAGGATGAAGTGACGTGCGAGTTGTCCACGTGTGTGTGTAACACGTGCGGTGCCGCGCTCGGCTCGGCGCAGCTGCTGGCCGCGCACGTGCGTCTGACGCACAGCGCGCTCACAATTCACAAATGCTTCCACTGCAAGGAAGTGTTCCGTACACTTGAGGAGCTGAGGCAGCACAAAGTGGCCTCCAACCACCAAAGGTCGCCTCGGACGGCGCTGAGGAAACCCATCGACAACATGGTGCCTCTGAACTGCGATGAGAAGCCATATTGCTCAGAGTGCGACAAGTCATTCAGCACGCGCAAAGGTTACCTCCGGCATTACAATACCAACCACAACGTAAACAGAATCCAAAAGTGCGGATTCTGCCAAGCGAAGTTCACGTCGACAGAAGAGATAGAAGCACACCGAGTCACGTACAACCATCACCCGAAGGTTCGCTACGTGAAGCGGCTCACTAGCACCGCCAAACCAGCGCGAACTGACACCAGTAATAACCGGTGTGAACTGTGCGGAGAAACCGTAGGCATGGGTCGAGTGCGAAGTATGTACCAGCACTTCGTGACGTCACATCCGGACACGCCCTACTGGTCCGTCTACCGCCGGCCGCAGAGCAGACATCTCTGCGAGCTCTGCGGGAAGACATTTAAGGTAACCAGTGACGGCAAACTCGCTATCCACTTCGTGACGTCACATCCGGACACACCCTACTTGTCCGTCTACCGCCGGCAGCAGAGCAGACATCTCTGCGAGCTCTGCGGGAAGACATTCAAGGTAACCAGTGACGGGACACTCACTATCCACTCCGTGACGTCACATACGGACACACCCTACTTGTCCGTCTACCGCCGGCAGCAGAGCGGACATCTCGGCGAGTTCTGCGGGAAGACATTCAAGGTAACCAGTGACGGGACACTCACTATCCACTCCGTGACGTCACATCCGGACATGCCCTACTTGTCCGTCTACCGCCGGCAGCAGAGCGGACATCTCGGCGAGTTCTGCGGGAAGACATTCAAGGTAACCAGTGACGGGACACTCACTATCCACTCCGTGACGTCACATCCGGACATGCCCTACTTGTCCGTCTACCGCCGGCAGCAGAGCGGACATCTCGGCGAGTTCTGCGGGAAGACATTCAAGGACCTACGTTTCTTCCTCGACCACCGCAACACGCACTCCGGCGCTCGTCCGTACTCCTGCACCATATGCGCCCGCACGTACGCCACCAAACGTCACCTCGGCTGGCATACTGCGCGACACGCGCCTCCGCGCAGGCAGTGCAAAGACTGCGGGAAGCTGTTCCATAGCGCGGCTAACCTGTTCGCGCATACACGGAGCCACGTCGGCGACCGCCGCTTCAAATGCGACATCTGCAGCAAAGGGTTCCTACACCAAGCGGCGCTTAACGAGCACGTCAGAGGGGTACACAACCACATACGACGCAACAGGAAGTGTCGGGACAAGTGA
- Protein Sequence
- MPIYQICRVCLRTDLELRNLDSPVLDLFLEFCGKTNRPVLSDLHKSIPLSTYSIFSQDLKNINITKESGDIEISIKVEKHEDNHSDGIKIDDNDEYTNDHAKIDDDLNDNDTDDDKCLINFVKKGVKIKKKKSESSSLDIPVKTNPKKQKPRRPLKDHEEYESVFDIQLFSTDAEIRREFAARKTSPRYMEAPHKCDICYTVYKCQKLAEFHMKWHLPSAGEFPCDVCAMRFKSHPAMRKHKADVHYGRFACKKCPLITYHSHSSTYMSHLRKSHRTEHVCVTCAQTFVSEKGLSVHRKKVHNASSKFDANGTARCSQCDLTFANQQVYTVHLMNTDKHKDKAEALIACPECGIQFPDKLAVRAHRREMHPQYNYSAMKRAESGQPLGQVCPLCGASGTHNTWLYRHFRESHPTHNYEQCVASERRKHLCDQCGKSFYNITQLKEHAFAHAGLKPFRCDQCPAAFSSKTHLKFHSERHAPPRRECSHCGKKFVSAANLSNHMRKNLDGFDISSDTLKNEHNAPKWPDAKDKENRETLWPENKQTENTEPEWPEDKLPQPDSPKIKIECTENAILNIELKPEIEQEGITFKVLDNYYCSDIFNNYNDDDEDYRPQKRKKKQKKEKVKENNKYSKETSNKNKLSNETIHKNKLSKITSGKNKLSKEQTSKNKLRDRMLELLEQDEFKDLGEGIEIDKDLFLKIFNKSKIGSVRCTLLLQNPDTKEEIECLKKFLLHILKKNNPEYEEMFDIERLDTEELKLQEFSARKLSKEYLEAEFKCEVCYKVFDAQRLLDYHRKWHAPTPGSISCTICLMRFARRKSLAQHLKDNHCAVYRCKLCPLLTYSFSVMVNHFHHHKGKEYPCPVCLSVFSNKSTMNNHRLQAHRTAHICPLCARSFVSEKGLYFHKQLKHKDEVTCELSTCVCNTCGAALGSAQLLAAHVRLTHSALTIHKCFHCKEVFRTLEELRQHKVASNHQRSPRTALRKPIDNMVPLNCDEKPYCSECDKSFSTRKGYLRHYNTNHNVNRIQKCGFCQAKFTSTEEIEAHRVTYNHHPKVRYVKRLTSTAKPARTDTSNNRCELCGETVGMGRVRSMYQHFVTSHPDTPYWSVYRRPQSRHLCELCGKTFKVTSDGKLAIHFVTSHPDTPYLSVYRRQQSRHLCELCGKTFKVTSDGTLTIHSVTSHTDTPYLSVYRRQQSGHLGEFCGKTFKVTSDGTLTIHSVTSHPDMPYLSVYRRQQSGHLGEFCGKTFKVTSDGTLTIHSVTSHPDMPYLSVYRRQQSGHLGEFCGKTFKDLRFFLDHRNTHSGARPYSCTICARTYATKRHLGWHTARHAPPRRQCKDCGKLFHSAANLFAHTRSHVGDRRFKCDICSKGFLHQAALNEHVRGVHNHIRRNRKCRDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -