Basic Information

Insect: Eupithecia exiguata
Gene Symbol: -
Assembly: GCA_947086465.1
Location: OX352256.1:4384324-4407387[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.028 1.8 9.5 0.1 1 23 231 254 231 254 0.95

2 17 0.02 1.3 9.9 0.9 3 23 327 347 325 347 0.96

3 17 0.00099 0.064 14.0 0.2 1 23 351 373 351 373 0.97

4 17 0.017 1.1 10.1 0.1 1 23 380 403 380 403 0.94

5 17 0.014 0.88 10.4 1.1 2 23 411 433 410 433 0.92

6 17 2.4e-06 0.00015 22.2 0.5 2 23 439 461 438 461 0.96

7 17 0.99 63 4.6 0.6 1 23 467 490 467 490 0.92

8 17 0.00014 0.009 16.7 3.9 1 23 496 519 496 519 0.98

9 17 4.9 3.1e+02 2.4 0.3 3 23 673 694 671 694 0.86

10 17 0.00044 0.028 15.1 3.2 1 23 716 738 716 738 0.98

11 17 6.7e-05 0.0043 17.7 0.4 1 23 742 764 742 764 0.97

12 17 0.017 1.1 10.1 4.2 1 23 769 792 769 792 0.91

13 17 0.16 10 7.1 1.0 2 23 801 823 801 823 0.91

14 17 0.023 1.5 9.7 6.5 2 23 831 853 830 853 0.96

15 17 0.00016 0.01 16.5 0.9 1 23 859 882 859 882 0.98

16 17 7e-06 0.00045 20.8 3.5 1 23 888 910 888 910 0.98

17 17 0.052 3.3 8.6 1.2 1 23 917 940 917 940 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.028	1.8	9.5	0.1	1	23	231	254	231	254	0.95
2	17	0.02	1.3	9.9	0.9	3	23	327	347	325	347	0.96
3	17	0.00099	0.064	14.0	0.2	1	23	351	373	351	373	0.97
4	17	0.017	1.1	10.1	0.1	1	23	380	403	380	403	0.94
5	17	0.014	0.88	10.4	1.1	2	23	411	433	410	433	0.92
6	17	2.4e-06	0.00015	22.2	0.5	2	23	439	461	438	461	0.96
7	17	0.99	63	4.6	0.6	1	23	467	490	467	490	0.92
8	17	0.00014	0.009	16.7	3.9	1	23	496	519	496	519	0.98
9	17	4.9	3.1e+02	2.4	0.3	3	23	673	694	671	694	0.86
10	17	0.00044	0.028	15.1	3.2	1	23	716	738	716	738	0.98
11	17	6.7e-05	0.0043	17.7	0.4	1	23	742	764	742	764	0.97
12	17	0.017	1.1	10.1	4.2	1	23	769	792	769	792	0.91
13	17	0.16	10	7.1	1.0	2	23	801	823	801	823	0.91
14	17	0.023	1.5	9.7	6.5	2	23	831	853	830	853	0.96
15	17	0.00016	0.01	16.5	0.9	1	23	859	882	859	882	0.98
16	17	7e-06	0.00045	20.8	3.5	1	23	888	910	888	910	0.98
17	17	0.052	3.3	8.6	1.2	1	23	917	940	917	940	0.96

Sequence Information

Coding Sequence: ATGGAAGGTTCAACGATAGACAGTATGTGTCGGTGTTGTGCGGCTGAGGGGATCTTCAAAGATATAAAAACGTCGTACCATTGGATGGGCGAGGAAGAGGTCTATGGAGACATGTTGAGAGAATGCTTCGATGTAAAGCTTGCAACAGTGGAAGAAGGCGGTATCTGCGAAGTTTGCATCACTCAGCTCCGGAACGCAGCCAACTTCAAGAAGCAAGTTCTTCATACGGAGAAGAAATTCAAGCGGCATTTGGAGACTCGGCGTTTTAAACCTACCGAGGTAAAAGAGGAAGATGGCAACTCTTCAGACGACATCGATCGAGGAGACGATTCAGAAGAGGATGAGGATTATGTCCCTGATTTTGAAATACCAATCAAAACGGAAACGAACGAAGAGTCAAAATCCCGTAAACGGGCCGTGAAAGCCACCACATCTCGGGCTAAGAAATCGAAGAGTGACGCTGATGATAAAAGCGATCGCAGAGCGAGTAAAAAGCTGGCAATATCCTTAAAGAAAGAGCGAGAGGGAAAATTGCATAAAGCAGCATATAAACAGACCTTTAAACTGCGGGAGGAAAAGAGTCTGAAAAAAGAAAAGTGTCTGCCAGAGATGAAGAAGCATTGTCACAATCTGACGACGATACTCAGTTGTTCGAACGCGACGCCATTCAAAGACAGGAACGATGCTGGATACATTTGCGCGTACTGCTACGAATCTTACCCCGATCCGGTGGTCCTTCGAGCCCACACACACTCCGAACATCAGGACGAAAAGAGGACTTACAAGGCCGGATCAGCTCTCAACAACTTCATCGCCTATCTAGACATCGTCGACTTGAAATGCACTTTGTGTGACTCACCCAAACCGGATCTCAAATCCTTGATCGAGCATTTGGTCGCGGTCCATCAGAAAGAGTATTACCTCGGGGAAACTGATTACTTCGTCCCCTTCAAACTCACAGAAGAAATACAGATCAACTGCTGCTTGTGCGACGAGCCCTACTTTAACATGAAGCTGCTAATgcagcatatgaatgtacactacagaaactttatctgcacgatttgcggggctggttttgtcaacaGTTTCAGGCTTCTAAGGCATGAGACGACGCATGAAAAAAAGAAATCTAGCTTCCCTTGCAAACAATGCGGTGCTGTGTTCTCAGCAGATTCTAAGCGCAAGGCTCATATCAACGAAGATCACAAAGGCATAGCTGGAGATAGCGTTTGCAGGATCTGCAAGGCTCGCTTCAAAAACTACTATCAGAAAACTAGACACATGGTCCAAGTGCATAACGCTGAAGGAGTTAAATGCGAGGTCTGCGAAAAGACGTTCAATCTCAAATCGAACCTCATCTCTCACATGAGGAACGTGCACCTGAAAGAACGCCCGTACGAATGCTCTGTTTGCAGCATGGGATTCTTTATAAAACGACAGATGCTGTACCATTATATGGCAACGCATACCAATGAGAGGAATTTCAAATGTGATGTGTGCGGGAAGGCTTATGCAACGCAGTGTAGTAAGAGGAAGCATATGAAGAAGAATCATGGTATAGTGCCGAGTCTTGCTTGTAAAAGTCGTGGAGAAAAAAACACAGTAAGTACTAAATTTAATAGGAATGATAAATCAGAAAGGAAATCTGATGCTAAAAGTGGCAAAAACACGAATGATTCAAAACAAGACAAGAAAGCGCGTGGAAATATCGATAACAATGATCCTGAAAGAGCTAAGCTAATTCAAAACAAGGACAGGCCCAGAAAAGACGATGTCAGTGGTGATAAAAAGAACAGGTCCGAAATCAGGAAAAAGGTTGAACGAGAGGGTGTGATTGTTGCTGGTAAAGAAAACAAGAAAAAATCAGTACAGGGCGCTTTGACCATATTCCTTACAGCCGCTGACCTGAAAACACACACGCTAGATGACCACGATGAGGACTACATCGAGAGATTTATGGTTGGAACTCGCCTCTACTCCTATGTCGTCAAATTGGACATAACCTCACTCCGCTGCATTATGTGCACTCGGAAAATATTTACTCTAGAAAATCTCATTGAACATCTAGAGATCAAACACAACAAACAGTTTTACAAGGATATAAAAAATCATATCCTTCCTTTTAAATTCCAAAGCGATGTATTTTCTTGCGTTATTTGCGATCGCAAGTTTGATCGTTTCAAACAGATGCAGCATCATATGAGCGTCCATTACAAGAACTTTGTCTGTGACGAATGCAACTTGCCTTTCATCAACAAAGCTACCCTCAGAACTCATCTATACAGACATACGAATGCGGCATTCAAATGTGATTTCTGCGGAAAAACCTTCGACACCAAGGCCAAATGTACCACTCACGAGAACTACGTACACATGATAGACGGCCACAGTCGCAACAGATGTACCTACTGTTCGCAATTCTTCGTGAGATACACAAAGAAAATACAACACATGGTTGAAGTTCACGGACACAAACAACGCACAGTAAAATGCAATTCTTGCAACAAGACTTTCCACTCCAAGGAGAAGTTTACGAAGCACAACAAAAGATATCATCTCTTGATGCGCAACTATCCATGTGATCAATGCGAGGGTCGTTTCTTCGATAACTACGATCTGAAGCGTCACAAACGCACGGTCCACGAGGCTTCCAAACCGTTTGAATGTACGACCTGCGATAAGAAGTTTACTAGACATGATAATATGCTGGAGCACATGCGACTACACAACCAGGAGTTTAGGAAATTCACCTGTGAATTTTGCGGATTGAATTATCCGAGTCTGACTCGTTTTAACAGTCATCTGAGCAGGACGCATAAGGACCGTGTGGATGCTAGTGCGATTGGCAAAAAGAGAACCAAGAAGTAA
Protein Sequence: MEGSTIDSMCRCCAAEGIFKDIKTSYHWMGEEEVYGDMLRECFDVKLATVEEGGICEVCITQLRNAANFKKQVLHTEKKFKRHLETRRFKPTEVKEEDGNSSDDIDRGDDSEEDEDYVPDFEIPIKTETNEESKSRKRAVKATTSRAKKSKSDADDKSDRRASKKLAISLKKEREGKLHKAAYKQTFKLREEKSLKKEKCLPEMKKHCHNLTTILSCSNATPFKDRNDAGYICAYCYESYPDPVVLRAHTHSEHQDEKRTYKAGSALNNFIAYLDIVDLKCTLCDSPKPDLKSLIEHLVAVHQKEYYLGETDYFVPFKLTEEIQINCCLCDEPYFNMKLLMQHMNVHYRNFICTICGAGFVNSFRLLRHETTHEKKKSSFPCKQCGAVFSADSKRKAHINEDHKGIAGDSVCRICKARFKNYYQKTRHMVQVHNAEGVKCEVCEKTFNLKSNLISHMRNVHLKERPYECSVCSMGFFIKRQMLYHYMATHTNERNFKCDVCGKAYATQCSKRKHMKKNHGIVPSLACKSRGEKNTVSTKFNRNDKSERKSDAKSGKNTNDSKQDKKARGNIDNNDPERAKLIQNKDRPRKDDVSGDKKNRSEIRKKVEREGVIVAGKENKKKSVQGALTIFLTAADLKTHTLDDHDEDYIERFMVGTRLYSYVVKLDITSLRCIMCTRKIFTLENLIEHLEIKHNKQFYKDIKNHILPFKFQSDVFSCVICDRKFDRFKQMQHHMSVHYKNFVCDECNLPFINKATLRTHLYRHTNAAFKCDFCGKTFDTKAKCTTHENYVHMIDGHSRNRCTYCSQFFVRYTKKIQHMVEVHGHKQRTVKCNSCNKTFHSKEKFTKHNKRYHLLMRNYPCDQCEGRFFDNYDLKRHKRTVHEASKPFECTTCDKKFTRHDNMLEHMRLHNQEFRKFTCEFCGLNYPSLTRFNSHLSRTHKDRVDASAIGKKRTKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -