Basic Information

Insect: Eupithecia exiguata
Gene Symbol: -
Assembly: GCA_947086465.1
Location: OX352255.1:5998188-6006045[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.14 8.9 7.3 5.6 1 23 130 152 130 152 0.96

2 12 6.6e-06 0.00042 20.9 1.3 1 23 159 182 159 182 0.97

3 12 9.7e-05 0.0062 17.2 1.8 1 23 189 211 189 211 0.98

4 12 9.3e-06 0.00059 20.4 0.8 1 23 221 243 221 243 0.98

5 12 5.8e-05 0.0037 17.9 2.7 2 23 249 270 248 270 0.97

6 12 5.2e-05 0.0033 18.1 0.3 2 23 275 298 274 298 0.92

7 12 0.00015 0.0095 16.6 1.2 1 23 304 326 304 326 0.97

8 12 5.4e-07 3.5e-05 24.3 2.4 1 23 332 354 332 354 0.98

9 12 5.9e-05 0.0037 17.9 2.6 1 23 359 381 359 381 0.98

10 12 0.00043 0.027 15.2 1.0 1 23 387 409 387 409 0.96

11 12 1.9e-06 0.00012 22.6 1.6 1 23 414 436 414 436 0.98

12 12 4.4e-06 0.00028 21.4 0.9 1 23 442 466 442 466 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.14	8.9	7.3	5.6	1	23	130	152	130	152	0.96
2	12	6.6e-06	0.00042	20.9	1.3	1	23	159	182	159	182	0.97
3	12	9.7e-05	0.0062	17.2	1.8	1	23	189	211	189	211	0.98
4	12	9.3e-06	0.00059	20.4	0.8	1	23	221	243	221	243	0.98
5	12	5.8e-05	0.0037	17.9	2.7	2	23	249	270	248	270	0.97
6	12	5.2e-05	0.0033	18.1	0.3	2	23	275	298	274	298	0.92
7	12	0.00015	0.0095	16.6	1.2	1	23	304	326	304	326	0.97
8	12	5.4e-07	3.5e-05	24.3	2.4	1	23	332	354	332	354	0.98
9	12	5.9e-05	0.0037	17.9	2.6	1	23	359	381	359	381	0.98
10	12	0.00043	0.027	15.2	1.0	1	23	387	409	387	409	0.96
11	12	1.9e-06	0.00012	22.6	1.6	1	23	414	436	414	436	0.98
12	12	4.4e-06	0.00028	21.4	0.9	1	23	442	466	442	466	0.96

Sequence Information

Coding Sequence: ATGGGTCCACAAACTAATCCACCAGTATGCATCGTGTGCCTGTCCAGTGATCAAGAATTATGGACCTTTGAGCACACCATTTTGCGCAGAATTCTCGAAAATCTTACAGAGCTCAAGGTGAATAAGGAAACTCTTGAACTGTTGAATGTAAAACCTTTTCAATACTTGTCAATAAGCACTGCGGAGTCAATGGCCACAATATACATCGTCGAATCTGATAGTTTAGAAAAAGTCGTAAAGCAAGAACCACTTTTGTTAAAAGAAGAAGAAATAAACGAAGAATCTGTCTTTGAAGATGCCTTTGACGAAAATGACGATGAACCTCTTAAGAAACCTCTTAAATTAGAAGATACTGAACCAAGTAGAGAGAAATATCCCAAGGAACAATTCTTTTGCTATAAATGCAATTTATCTTTCAATCTCAAATTTCATTACGAACAACACTCAAAAATACACACTGAAGAAGAAAAGGTATACGCTTGCGATGACTGTCCTAAAAAGTTTAAACTGAAACGAAGCTTAGTTAAGCACATGCTGAAGTTCCACAAAGAAAAGACAAAACTGTACCCTTGTACTATATGTACAGAGAAATTTCAGCACAAAATCGCATTAAAAAAGCATTTACTCTCTCATAAAGATACCAGTGATGTTATAGAAGAGTTCACTTGTGAAATTTGCAATAGAATTGTCAACAACCAATACAATCTTCAAAAGCACAAGGCTACTCATACAGCAGATTCTTTAACCTGTCAAACATGTGGCAAAAACTACCTTAACAAAAATACCCTAAAAAAACACATGCGAACTCATAATCTACAGCATGCTTGCGACTATCCAGGCTGCGGTAAGATCTTCGCGCAGAAAAATCAACTAACTATTCACTCTCGGGTTCACAGCGGTGATAGACCATTTGCTTGCGACAAATGTAATAGAACCTACACGCTCTTGGACTCTTTGAAATACCACCAAAGAGGTCACGAAGGAAACAGGCCGTACAAGTGCAACCTATGCGAGAAAGCCTTCTACAGAAAGTTCAATTTAACAAACCATATGAAAGCACATGACAGAGAGTCGTACAACTGCTTGCATTGCAGTAAAACCTTCAACCTACCTGTGCACTTAGAAACTCATATGCTTATCCATACAGAATTAAAACCTCATGCTTGTAGACTCTGTGATTTAACCTTCGCTGCACCAAGTTGTCTGAAAGCCCATATGGTAACCCATACGGACTACTTGTTTACTTGCGACCGATGTGCGAAGAGCTTCCGCGACAAAAGCAGCCTGCAAAGCCATATAAAACTACACGACGGAATCAAACCCCACGTCTGTCCAGAACCGAACTGTGGGAAATCTTTCGTTCGGAAATTTCAACTAAAAGAACATTCTAGAGTACATTCCGGAGAAAGACCGTACATTTGCAATGAGTGTGCCTCTCACCGGCCTCGGTGTCCCGTATCCAGAGAGAATATGCTATGTATGTCACTGGCAGCTGCTAAAGTGCCGCAAATTTGGAGACATGGCTCATAA
Protein Sequence: MGPQTNPPVCIVCLSSDQELWTFEHTILRRILENLTELKVNKETLELLNVKPFQYLSISTAESMATIYIVESDSLEKVVKQEPLLLKEEEINEESVFEDAFDENDDEPLKKPLKLEDTEPSREKYPKEQFFCYKCNLSFNLKFHYEQHSKIHTEEEKVYACDDCPKKFKLKRSLVKHMLKFHKEKTKLYPCTICTEKFQHKIALKKHLLSHKDTSDVIEEFTCEICNRIVNNQYNLQKHKATHTADSLTCQTCGKNYLNKNTLKKHMRTHNLQHACDYPGCGKIFAQKNQLTIHSRVHSGDRPFACDKCNRTYTLLDSLKYHQRGHEGNRPYKCNLCEKAFYRKFNLTNHMKAHDRESYNCLHCSKTFNLPVHLETHMLIHTELKPHACRLCDLTFAAPSCLKAHMVTHTDYLFTCDRCAKSFRDKSSLQSHIKLHDGIKPHVCPEPNCGKSFVRKFQLKEHSRVHSGERPYICNECASHRPRCPVSRENMLCMSLAAAKVPQIWRHGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -