Basic Information

Insect: Eupithecia exiguata
Gene Symbol: -
Assembly: GCA_947086465.1
Location: OX352256.1:4090892-4102929[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.064 4.1 8.3 0.4 1 23 52 74 52 74 0.92

2 20 0.023 1.5 9.7 0.1 2 23 99 121 98 121 0.93

3 20 0.029 1.9 9.4 0.8 2 23 144 165 143 165 0.97

4 20 0.00056 0.036 14.8 0.1 1 23 169 191 169 191 0.95

5 20 0.00062 0.04 14.7 0.4 1 23 196 219 196 219 0.92

6 20 0.16 10 7.1 0.0 1 23 260 283 260 283 0.90

7 20 8.7e-05 0.0056 17.3 2.9 1 23 350 372 350 372 0.99

8 20 1.8e-06 0.00011 22.7 0.2 2 23 377 398 376 398 0.97

9 20 1.4e-05 0.0009 19.8 0.9 1 23 406 429 406 429 0.97

10 20 0.00046 0.03 15.1 8.6 1 23 435 458 435 458 0.96

11 20 0.044 2.8 8.8 0.7 1 23 464 487 464 487 0.95

12 20 0.0036 0.23 12.3 0.7 1 20 493 512 493 513 0.95

13 20 0.058 3.7 8.5 0.2 1 23 660 682 660 682 0.97

14 20 1.2 80 4.3 0.1 1 23 754 776 754 776 0.90

15 20 0.0007 0.045 14.5 0.2 1 23 780 802 780 802 0.98

16 20 0.021 1.3 9.9 1.4 1 23 807 830 807 830 0.95

17 20 0.008 0.51 11.2 0.4 2 23 837 859 837 859 0.93

18 20 0.0022 0.14 13.0 6.1 1 23 866 889 866 889 0.97

19 20 3.4e-05 0.0022 18.6 0.7 2 23 896 917 895 917 0.96

20 20 3.6e-05 0.0023 18.6 0.6 1 23 923 945 923 945 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.064	4.1	8.3	0.4	1	23	52	74	52	74	0.92
2	20	0.023	1.5	9.7	0.1	2	23	99	121	98	121	0.93
3	20	0.029	1.9	9.4	0.8	2	23	144	165	143	165	0.97
4	20	0.00056	0.036	14.8	0.1	1	23	169	191	169	191	0.95
5	20	0.00062	0.04	14.7	0.4	1	23	196	219	196	219	0.92
6	20	0.16	10	7.1	0.0	1	23	260	283	260	283	0.90
7	20	8.7e-05	0.0056	17.3	2.9	1	23	350	372	350	372	0.99
8	20	1.8e-06	0.00011	22.7	0.2	2	23	377	398	376	398	0.97
9	20	1.4e-05	0.0009	19.8	0.9	1	23	406	429	406	429	0.97
10	20	0.00046	0.03	15.1	8.6	1	23	435	458	435	458	0.96
11	20	0.044	2.8	8.8	0.7	1	23	464	487	464	487	0.95
12	20	0.0036	0.23	12.3	0.7	1	20	493	512	493	513	0.95
13	20	0.058	3.7	8.5	0.2	1	23	660	682	660	682	0.97
14	20	1.2	80	4.3	0.1	1	23	754	776	754	776	0.90
15	20	0.0007	0.045	14.5	0.2	1	23	780	802	780	802	0.98
16	20	0.021	1.3	9.9	1.4	1	23	807	830	807	830	0.95
17	20	0.008	0.51	11.2	0.4	2	23	837	859	837	859	0.93
18	20	0.0022	0.14	13.0	6.1	1	23	866	889	866	889	0.97
19	20	3.4e-05	0.0022	18.6	0.7	2	23	896	917	895	917	0.96
20	20	3.6e-05	0.0023	18.6	0.6	1	23	923	945	923	945	0.99

Sequence Information

Coding Sequence: ATGCAACAGACTGATACAACAATGGCCAGCCAGTCGATAAACGATCGCCAGATCGTGCTAACGAAGAAAAGGGCATTGATGGAAGACAAGGCAAACGCGGGACTCCTTTTAAAGTATTCGAATGCGGTCGTCTTTAGATGGCAAAGAGGGAAGTTCATGTGTGCCCATTGTCCTGAAAATTTCGCCAATTTTATAGATTTTCGAATCCACTCTGCTGAGCACAATAAGTTAGATATAGTAGACACTTACAAGACTCGTCTCATCTTTCCCTTGAACTTGGATATATCAAGTCTTGTTTGCAGTATTTGCGATGCCTCAATAAAAGATATCGATGATCTAAAAAGTCATCTATCAAATAACCACAGTATATCTATAGATGGAAAATACGCTGATGGTGTTATACCATATCGTTTAGTCGGAGAGAGTTTGCGATGTGTGATTTGCGAATCTAGTTTTGACAAATTCATGACTTTATTTATTCACATGAACAAACATTACCCGAGCTACGTCTGTGATTTCTGCGGGAAAGCTTTCTCCGCTGCCAATAAGCTAAGATCACATAATGCTATACACAATCCAGGAATGTTTAAATGCAATGAATGCGACGCTGTTTTCACAAATAGGGCGGCTAAGAACAGGCATGTTAGCGGGAAACATCGAGACCCTGTCCGGAGATTTGGTTGGATACCGAGGCGAAAATACTACGACCACAGAGACAATGCAGCCCTTATTCTAGAATATTCTAACATTTGTCCATTTAGGTGGCACCGAGGCATGTTTGTCTGCGGGATCTGTCCACAAAAATTTGCCAAGTTCGAACCTGTCAGAGACCATATCGCCTTAGAACATCCCAACAAAATCGAGGCACTTAAGCCTATAAAAAAGTACTTCCTAAAATGCGATATAACAGATCTTAAATGTATGATATGTCTCGCAAGTATGAAAGACATCAACGCTTTTGTTGAGCACTTAAAAGATGATCACGGTAAGCCGCTTGTCAACGACTGTGGTATGGGTATCATACCCTATCGATTAAGCACTGCGTTATACAAATGCACGCACTGCCCTGAAACCTTTAACTTCTTCAACTCTTTGAACAGCCACATCAACATCCACTACCCGAATTCTGTGTGTCCAATCTGCGGAAAAGCTTTCTCAAATACCGGTAAAATGAACTCGCATATGCAAACACACGGCATTGGAACCAAAGGGGTATACAAATGCTCCAAATGTGACGAGGTCTTCACCAGCCCATACGATAAACAGAAACACATTTTGTCGTCACACTCTAAGCTGAAGAGATACAGATGCCCACATTGCCACGAGAGCTTCAAACGATACTCGCACAGGTTAAAGCACATGAACGAATTTCACGATACTAAAATTGATTTCCCCTGTAGTCTTTGCCCTGCTGTGTTTACAATGCACAACATGAGGACGAAACACATCCAACAAGTTCATATCAAGGAGAAGCGTTACAGTTGCACTGAATGCACGCACCAGTTTGTGACTATCTCGATGCTTAGAAGACACAAGATCTGTGTCGATGAGCCCCCCGAAAAAAAGACACCGGAACAGGAACAGAACGACGAGCGGCGTTTGAGCCTCTTAATACTCCTAGAAAGAAACCAAATAGCTGTCGCGACGAAGCAATCGAGAGTTGTGCCACTCTTCCAAGTGGCTTACGATCGTACCCTCTGCAAACCTCTCGGAACGATCACAGACTTCAGTAAACTGCAGAGAACACAGAATATCTCACTCTCAGACACTATCGTGTACGAGAACTCTCGAAGCCCATCGCCTGTTTGTCCCAGAACCCCATCGCCATATGCTCCCGAAGAACAAACAGACATCAATCCACCTGCGAAGTATCTACTAAAAGCACAACCTGCGAGAAAGGTCTCCGATTGCAGACAGAATGCTCTCATAGTCTTCGAATACTCCACCGCTTACCCTTTCATATTCTCAAACAACAGTTACAGATGCTTTGTCTGCTCCGAGTCGTATTTAGACGTTCCGAACCTTAAGATCCACATGTCGGAACACCCTTTCGCTCATATCAAACGACTAATGAATAACAGAAAGGAGAATGTTCTTAAAGTTGACATCAGTGAGCTGACTTGCAAACTCTGCATGCTGCCTATGAGAGATTTGGTAATATTAAAGCATCATCTCAAAAATGAGCACAATAAGCCGGTAGATACGGAGCTGCAAGACAACCTGGTGCCTTACGATCTGACCATACACGGTCCTGAGGGGTACCAGTGCGTTGTTTGCGAGCAGAACTTCATTAAAGTCCGTATTCTCGTCATACACATGAGCGATCACTTCAGCAACTACAGCTGCGAAGTCTGCGGATCAGGTTTCATGACACTACGCCTGCTAAAGAAGCATCTGGAAGTCCACGAGACGGGAAACTTCCCTTGCGATCGCTGTACCAAAATATTTAGCACTACGCACAAAAGGGCGTTGCATATCCGCGGGGTTCATATGAAACTGTGCCCGCGGCGATGCCCAATGTGTCCAGAGCGGTTTAACTCTAACTACAAACGGACAATACATCTCCAAGACGTGCATAACCAATCCACAAGAGTGCATAAATGTAAGACATGCGGGCGTGGTTTCCATCTTAAGTATCATCTAATAAGCCACGTGCGTTCCGTGCATTTGCAAGAGCGGAATCAACAGTGCGATGTGTGTCTACAACGGTTTTCTAATAAAGAGTCGTTGAAGCGACATATGGTCGTTCATACGGGAGAGAAGAACTATAAATGTGAAGTTTGCGGAATGGCTTTCTTGAGGCGGAAGAATTTGAAGGACCATTTACGATTGCATGAGATTCATTGA
Protein Sequence: MQQTDTTMASQSINDRQIVLTKKRALMEDKANAGLLLKYSNAVVFRWQRGKFMCAHCPENFANFIDFRIHSAEHNKLDIVDTYKTRLIFPLNLDISSLVCSICDASIKDIDDLKSHLSNNHSISIDGKYADGVIPYRLVGESLRCVICESSFDKFMTLFIHMNKHYPSYVCDFCGKAFSAANKLRSHNAIHNPGMFKCNECDAVFTNRAAKNRHVSGKHRDPVRRFGWIPRRKYYDHRDNAALILEYSNICPFRWHRGMFVCGICPQKFAKFEPVRDHIALEHPNKIEALKPIKKYFLKCDITDLKCMICLASMKDINAFVEHLKDDHGKPLVNDCGMGIIPYRLSTALYKCTHCPETFNFFNSLNSHINIHYPNSVCPICGKAFSNTGKMNSHMQTHGIGTKGVYKCSKCDEVFTSPYDKQKHILSSHSKLKRYRCPHCHESFKRYSHRLKHMNEFHDTKIDFPCSLCPAVFTMHNMRTKHIQQVHIKEKRYSCTECTHQFVTISMLRRHKICVDEPPEKKTPEQEQNDERRLSLLILLERNQIAVATKQSRVVPLFQVAYDRTLCKPLGTITDFSKLQRTQNISLSDTIVYENSRSPSPVCPRTPSPYAPEEQTDINPPAKYLLKAQPARKVSDCRQNALIVFEYSTAYPFIFSNNSYRCFVCSESYLDVPNLKIHMSEHPFAHIKRLMNNRKENVLKVDISELTCKLCMLPMRDLVILKHHLKNEHNKPVDTELQDNLVPYDLTIHGPEGYQCVVCEQNFIKVRILVIHMSDHFSNYSCEVCGSGFMTLRLLKKHLEVHETGNFPCDRCTKIFSTTHKRALHIRGVHMKLCPRRCPMCPERFNSNYKRTIHLQDVHNQSTRVHKCKTCGRGFHLKYHLISHVRSVHLQERNQQCDVCLQRFSNKESLKRHMVVHTGEKNYKCEVCGMAFLRRKNLKDHLRLHEIH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -