Eexi000810.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupithecia exiguata
Gene Symbol
-
Assembly
GCA_947086465.1
Location
OX352255.1:6011453-6018311[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.0049 0.31 11.8 6.8 1 23 253 275 253 275 0.98
2 16 0.00038 0.024 15.3 4.4 1 23 282 305 282 305 0.95
3 16 0.00036 0.023 15.4 2.8 1 23 312 334 312 334 0.98
4 16 0.00028 0.018 15.8 3.7 1 23 343 365 343 365 0.98
5 16 6e-06 0.00038 21.0 2.9 2 23 371 392 370 392 0.97
6 16 5.2e-05 0.0033 18.0 0.8 2 23 397 420 396 420 0.92
7 16 0.0034 0.21 12.4 2.0 1 23 428 450 428 450 0.96
8 16 0.001 0.065 14.0 2.0 1 23 454 476 454 476 0.96
9 16 1.5e-06 9.5e-05 22.9 5.4 1 23 482 504 482 504 0.98
10 16 0.00041 0.026 15.2 0.4 1 23 510 532 510 532 0.98
11 16 0.0022 0.14 12.9 0.9 1 23 539 561 539 561 0.94
12 16 1.3e-06 8.1e-05 23.1 3.5 1 23 567 589 567 589 0.98
13 16 6.8e-05 0.0044 17.7 0.4 1 23 595 617 595 617 0.95
14 16 4.9e-06 0.00031 21.3 0.3 1 23 623 646 623 646 0.96
15 16 7.1e-05 0.0045 17.6 4.4 1 23 652 675 652 675 0.98
16 16 7e-07 4.5e-05 23.9 2.1 1 23 680 702 680 702 0.98

Sequence Information

Coding Sequence
ATGTTCTCTTTTGCGACATACTTTGGCATAGTGGTTGTTGAACAGTACGACAAAGTAGGGAACAACTTTAAAAAAATATGCACGGAGTGCTATGAGGAGATGAACAAATGTTTCGAGTTCGTGGATAAGGCACAGAGGTCCTACAACATACTCCAAGATCTTCATTTAAAGGGATTAGTGGCGACGAAGGAGACACTGGAGCTCATGAATGTTGCACCTTATCAAAACTTGTCAGTAAGGACAGAGCCTACTGCCACAATGAATGCCGTGGAATCAAATGAAACCATTGAAGTTATCATAAAGGAAGAACCACTGAAAGAAATAGACGAAGAAGTAAGCCCTGCAGAGTCTACGGTCACGATGACTTTCGTGGAATCAAGTGAAAGTACTGAAGTTATCATAAAAGAAGAACCTCTAAAACAAATAGACAAAGAAGTAAGCTCTGCAGACCCTACGGTAATGACGAATTACGTAGAATCAAAAGAAAATATTGAGATTACTATAAAGGAGGAACCACTAAACGAAATAGACGAAGATGTAAGCGCTGCGAAGTCTACGGTCTCGATGAATTTCGTGGAATCAAATGAAAACATTGAGGTTATCATAAAAGAAGAACCGGTAGAGTTTAACGAAGAAATAGACGAAGAATCTGACTCTAAAGATGCATTAGAAGAACATGATGTAAAGCCGCTCATAAATCCAATTAAACTAGAACATATCGCATCAGATGGCGAGCATAATTATGCCAACGAACCATACCGTTGCCGTATATGCAATTTATCATTCAATCATAAATTTCATTATGAAGAACACACGAAATTACATAAAGAAGAAGAAAAGTCATATGCTTGCGATCATTGCCCTAAAATGTTTAAACATAAACGGAGTTTACCCAAACACATGCTGAACTTCCATAGTGAAATCAGTAAGCTGTATCCATGCACTATATGCACAGAGAAATTTTATCACAAAATCGCCTTCAAAAAGCACTTACTCTCCCATAAAGATACAAGTTCTGTTGAAGAGTTTAAGTGTGAAATCTGCAATAGAAACTGCATGAATCTATACAATCTTCAGAAACACAAAGCGACGCATACAGAAGAGTCCGTCACTTGTACAACATGTGATAAAAACTTTAGAAACAAACAAACGCTGAAAAAACACGTACAAACGCATAATCCACAACATGCCTGCGATTATCCAAACTGCGGAAAAGTCTACGCGCAAAAAAATCAACTGACGAGGCACTCAAGAATACACGGGGAGCTCCCTGCAGCAAAATTCGCATGCTATCAATGCTCCGAACACTTCGACGAGAAAAGCGATTACGAAAAACACATGGAACAGCACGAGAATGGATTCCCTTGTACCCAATGCGAGAAAACTTTTGTTAACCGCGAAAGACTACGCTACCACTCATATACCCATACTGAAGGCAAGACCTTCAACTGTGACCATTGTCACAAAGCTTTCTCCCGGCAAATCTACCTTAATCGACACATGAAAGTACATGATACAGTCAAACCCTACGTATGTACGGAGTGCGACCGCGCCTTCGGTTTAAGATACAGTTATCTCAAACATCTTGAATCACACAACGTGAAGACTTACACGCATCCATGTAATTATTGCCCAAAAGTCTTTACTGATATGAACAGGCTAAATTTTCATATGGCAGTCCATTCTGGGGTGAAACCACATGTGTGCACAGTTTGCGAGAAAGGGTTTACAAGGAGCCATCAGCTGAAGGAGCATATGAGGGTGCACACTGGAGAGAAGCCTTTCGCTTGTGAGGAGTGTGGGAAGAGTTTTACTCAAGCCGGATCGCTAATATTTCATAAGAAGAGCCACAGCGGGTTGCGTCCTTTCGTCTGCCCAGTCTGCTCCAAGGCTTTCTTCAACAAGTACACTCTACGGATCCACCTCCGGGGCGTCCACAGCGGGGAGCAACCCTACTCCTGCACCATTTGTCACCAGAGATTCACATACAACTCTGGCCTGAATGAACATAAGCGCAGGTTTCACAATAAAGAGAAGTTTGTTTGTGAAAGCTGTGACAAGACTTTTACTAGAAAGGCCCGTTTGCAGCGGCATTTGAAGACTCATCTCACGGAGTAG
Protein Sequence
MFSFATYFGIVVVEQYDKVGNNFKKICTECYEEMNKCFEFVDKAQRSYNILQDLHLKGLVATKETLELMNVAPYQNLSVRTEPTATMNAVESNETIEVIIKEEPLKEIDEEVSPAESTVTMTFVESSESTEVIIKEEPLKQIDKEVSSADPTVMTNYVESKENIEITIKEEPLNEIDEDVSAAKSTVSMNFVESNENIEVIIKEEPVEFNEEIDEESDSKDALEEHDVKPLINPIKLEHIASDGEHNYANEPYRCRICNLSFNHKFHYEEHTKLHKEEEKSYACDHCPKMFKHKRSLPKHMLNFHSEISKLYPCTICTEKFYHKIAFKKHLLSHKDTSSVEEFKCEICNRNCMNLYNLQKHKATHTEESVTCTTCDKNFRNKQTLKKHVQTHNPQHACDYPNCGKVYAQKNQLTRHSRIHGELPAAKFACYQCSEHFDEKSDYEKHMEQHENGFPCTQCEKTFVNRERLRYHSYTHTEGKTFNCDHCHKAFSRQIYLNRHMKVHDTVKPYVCTECDRAFGLRYSYLKHLESHNVKTYTHPCNYCPKVFTDMNRLNFHMAVHSGVKPHVCTVCEKGFTRSHQLKEHMRVHTGEKPFACEECGKSFTQAGSLIFHKKSHSGLRPFVCPVCSKAFFNKYTLRIHLRGVHSGEQPYSCTICHQRFTYNSGLNEHKRRFHNKEKFVCESCDKTFTRKARLQRHLKTHLTE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00706252;
90% Identity
-
80% Identity
-