Eexi018525.1
Basic Information
- Insect
- Eupithecia exiguata
- Gene Symbol
- -
- Assembly
- GCA_947086465.1
- Location
- OX352256.1:4200812-4211159[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-09 4e-06 26.7 0.0 1 33 213 245 213 250 0.94 2 2 6.8 7.1e+03 -2.9 0.2 31 44 459 473 458 474 0.83
Sequence Information
- Coding Sequence
- ATGGCAGTGGAAAAACTTGAAATAGAGACATATTTTGGGAAGTGTAAGTGCTGTCTCCAATTTGGTTATCTGAGACCTATGTGGGACGAACATGACGAAAATGAAGTCTACGGGAAGATGCTCACGCAATGTTTTTCAATTCCGTGGACTATAGAAAGCTCTGAGGAGGAGGATCAGATCTGCGAGGATTGCATATGGAAGTTGCAAGAGGCCAACAAGTTCAAGCAACAAATTCTACAGAATCAGAATCCAGATAACAAAATAGATAACCAAAGTGAAGAAATAAAATCAGAACCAGAGGAGGCATATGATGTTGAATACCTGGATGAAGATCTTTTGCACAAGAATGTTGAAGAGACAGAAACCGATGAACAGAAATCAGACTATGATGTGGATTATCTAGAAGATGTTGAAACACTTGATGATGATGATGAAAATGATGATGATGGATCATATAAATTGGATGAAGATGAAGAAGATGATGATGAAGAATACAAAGAGTCGGAGGCGTCTATATCCACTTCGAGAAAACGGGCTCCGCGGACAGAGGATACTGGTAGTGAGGCGGACACACCCAAACCGAAGTGGCCAAAGAAACTGCCTCTGCAGGAACGATGGAAGACTTATAGGCAGTACACAGATGATGACCTGATGCTAGCTATTGATGAGGTGATGAACAAGACCGTGAGCCAGAGACAAGCCGCCCTCAAGTTCAACGTGCCTGTTAAGACTCTGGGCGCCAAAATCAGAGATATGAAAAATTTGGAGGAGGCAAGGTCATCGGAGTCTGAAGACAAAAGAAAAGGCGACTCCGAAGCCCCAGCGGCCATACAGAAGCACAGAGAGAATATACAGTCCGTACTGGCTTACTCGAACGCTACGCCTATGCGAGGCTTCTGGGGAAAAGGCTTTGTTTGCTCGATATGCCCCCTTCAATTCGGCGAGCCATCTGAACTGAAAATACATACGCAAACCCATGGAGACCTCCCAAAATTATTCAAACTCCACCACGTCAGAGGTCATATcgctagagtagacataaccgacctgaaatgcaatctttgcaacacgaaattcgcgaaactgcaatccctgatgcagcatcttaagacgatacatggcaaacctatgcactttgatatagataaccatatgatcccgttcaaattcgattcggaattgcttgagtgtgagtattgtaccaacacttttgagcactgcaagaccttatcagagcacatggccaacaaacattataggaactatgtctgcaataaatgcgataagggtttcttcaacctcgcccatctggttacccacagagaaactcataagtccggtgaatttaaatgcgataaatgcggaaaattcttcactacgctgcggaaaaaGGCCAAACATGAACGCTTGCATGTCACTCGCGGTAAAAACTACAAGTGCAAATTTTGTGACAGTTTCTTCTATAATGCAAAGCTGCGCGATAATCATGAGTTGAAAGTGCATGCTAACGATAAACTGGAATTCGACTGCGGTTATTGCGACAAAACTTATAACGTGTTGAAAAATCTTCGTGCGCATATTGACGAAGTTCATTTGGAGACGAAGACGCATGAATGTCCTGTGGAAACCTGCGGGAAATCTTTCTACCTTATGCGTACGCTAAAAGCGCATGTTAAACAGCACGGTTTTAAGCTGTTTCAATGTCCAAGGTGCTTTAAGATGTTCAAATCAAGTGTTACTCTCAGAAGTCATATGCCTGTACATACGAGTGAGAGAGAAAGGAAATTCAAGTGTGAGGAGTGTGATGTCAGTTATTTGAAAAAGGATAATTTGAACAGGCATATAAAGAAACATCATTAA
- Protein Sequence
- MAVEKLEIETYFGKCKCCLQFGYLRPMWDEHDENEVYGKMLTQCFSIPWTIESSEEEDQICEDCIWKLQEANKFKQQILQNQNPDNKIDNQSEEIKSEPEEAYDVEYLDEDLLHKNVEETETDEQKSDYDVDYLEDVETLDDDDENDDDGSYKLDEDEEDDDEEYKESEASISTSRKRAPRTEDTGSEADTPKPKWPKKLPLQERWKTYRQYTDDDLMLAIDEVMNKTVSQRQAALKFNVPVKTLGAKIRDMKNLEEARSSESEDKRKGDSEAPAAIQKHRENIQSVLAYSNATPMRGFWGKGFVCSICPLQFGEPSELKIHTQTHGDLPKLFKLHHVRGHIARVDITDLKCNLCNTKFAKLQSLMQHLKTIHGKPMHFDIDNHMIPFKFDSELLECEYCTNTFEHCKTLSEHMANKHYRNYVCNKCDKGFFNLAHLVTHRETHKSGEFKCDKCGKFFTTLRKKAKHERLHVTRGKNYKCKFCDSFFYNAKLRDNHELKVHANDKLEFDCGYCDKTYNVLKNLRAHIDEVHLETKTHECPVETCGKSFYLMRTLKAHVKQHGFKLFQCPRCFKMFKSSVTLRSHMPVHTSERERKFKCEECDVSYLKKDNLNRHIKKHH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00706313; iTF_00705936; iTF_00699507;
- 90% Identity
- iTF_00699507;
- 80% Identity
- iTF_00699507;