Eexi020257.1
Basic Information
- Insect
- Eupithecia exiguata
- Gene Symbol
- -
- Assembly
- GCA_947086465.1
- Location
- OX352237.1:3494579-3498444[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6 3.7e+03 -2.0 0.2 34 41 32 41 27 46 0.68 2 2 3.6e-09 3.7e-06 26.8 0.0 2 38 51 87 50 92 0.89
Sequence Information
- Coding Sequence
- ATGAATAGCTTAGCTTTTGATCAATTCATAAAATACTTTTGGGACCAATTACTACAGGATACAAAAAGCTCGAGAGAAAGCTTTAGGAGCATGTGGAATGGCAAATACAAAAGAAGACGATATTTAAAAAGGACATATAAACATTATTCGGAAGATTTGTTGGCTCTTGCTATAAAAATGGTCAAGAACAGAGAAATGACTGTCAGATGTGCCGAACGAACCTATGGCATTCCCCGAAGAACCCTTGATAATAAGATAAAAGGGATACATGCGGGCAAAATAGGTGGCCGTTTTAAGTTGAGCAATGAAGAAGAAACAGAATTTATAGCTGTACTGACAAAAGCAGCATTAAACAGAGGGTCTCCATTAACATTACTAGATTTAAGACGAATGTTCTACAACTATTTGAAGAAAAATAAAAGAGCGTATCTTTTCAACAACAAAGCACCGAGTGTGCCGTGGACCAAAAGTTTCATAGAAAGACATAAAGAAGATTTGATAACTTGCGTCACTCAAGATATATTAGGAGCTCCAGTTGAAAGAATTCGTCTATGA
- Protein Sequence
- MNSLAFDQFIKYFWDQLLQDTKSSRESFRSMWNGKYKRRRYLKRTYKHYSEDLLALAIKMVKNREMTVRCAERTYGIPRRTLDNKIKGIHAGKIGGRFKLSNEEETEFIAVLTKAALNRGSPLTLLDLRRMFYNYLKKNKRAYLFNNKAPSVPWTKSFIERHKEDLITCVTQDILGAPVERIRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -