Eexi020131.1
Basic Information
- Insect
- Eupithecia exiguata
- Gene Symbol
- -
- Assembly
- GCA_947086465.1
- Location
- OX352237.1:2614857-2615270[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-10 1.1e-07 31.8 0.0 5 37 1 32 1 39 0.87
Sequence Information
- Coding Sequence
- ATGAAAGCAGCTGTCGATCTAGTAATGAATGGAAAACCTTTAAGGAAAGCTGCAGAATTGTATGGAATACCATATCCGACCCTACGCAGCTACTATACCAAATCAAAGCTCGACGATAAAATAAGATACACTCCCAATTATGAAGCAAACAGAATTTTCTCCGATGAACAAGAACAACTCATAAAAGATGACTTTAAAAATGCAATGGCGCTTGGCAACTTAACTGTCCAAGGTTGTTTGAGGACGGCTTACCAAATGGGTGTTCATCTAGATGTTAAAATCCCTCCATCTTGGAGAATCAAACAGATGGCTGGCAGGGATTGGTTCAGAGGTTTCAGACAACGACACCGCGACTTTAACTATGAATTCAAACGTAGTTCAAAATCTGAATTATCTGAAGTTGATAATGAATGA
- Protein Sequence
- MKAAVDLVMNGKPLRKAAELYGIPYPTLRSYYTKSKLDDKIRYTPNYEANRIFSDEQEQLIKDDFKNAMALGNLTVQGCLRTAYQMGVHLDVKIPPSWRIKQMAGRDWFRGFRQRHRDFNYEFKRSSKSELSEVDNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00701911;
- 90% Identity
- iTF_00705926; iTF_00702837; iTF_00701911;
- 80% Identity
- -