Basic Information

Gene Symbol
Kdm5
Assembly
GCA_947086465.1
Location
OX352251.1:146498-175769[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.2e-24 8.6e-21 74.4 0.0 2 89 101 184 100 184 0.94
2 2 2.2 6e+03 -2.0 0.0 47 71 1295 1319 1283 1335 0.65

Sequence Information

Coding Sequence
ATGGGAAAATGTGATGAAACGAATGTGGAAGTGAATATGGGGGACTCTGCGTCCCCCATGAAGCCCGACAATTTCACGTTCACGCCGCCCCCCGAGGCGCCGGTGTTCGAACCCACGGCCGAGGAGTTCCTGGACCCGCTGGCGTACATCAGCAAGATACGGCCTATCGCTGAGAAATCCGGGATTTGCAAGATTAAACCACCAGCGCACTGGCAGCCCCCATTCGCGGTGGACGTGGACCGGCTCCGCTTCACGCCGCGCATCCAGCGGCTCAACGAGCTCGAGGCCATAACCCGGGTGAAGCTGAACTTCCTGGACCAGATCATCAAGTTCTGGGAGCTGCAGGGCAATGCCCTCAAGATACCCACCGTGGAGCGCAAGCCGCTCGACCTGTACGCGCTGCACAAGATTGTCAGGGAAGCAGGTGGGTTCGAGGTATGTTCCGTGGAGCGCAAGTGGTCCAAGATCGCGCGGCGCATGGGCCATCCGCAGGGGAAGGGCATCGGCTCCATACTCAAGAACCACTACGAAAGGATCCTGTACCCCTACGACGTGTTCAAGAGCAACGGTGCCGTGGCCGATCATAAGGACACTAAGATAGAAGTGAAACGCGAGGCGACACCCGAGCAGGTGGCAGCGGGCGGGCCGCGCGCGCGCTCCGTCTCCAAGTGCGGCACGTCCCCGGCGCCCGCGACCGCGCCCTCCCCCGCGCGCCGGTACAAGGCCGAACCCGAGGCCGCCGAGGGCTCGCACACCGAGGGAGCCCTGCCGCCCAACAGCGACAAGGGCATGAAGACGCCGGTCAAGGAGGAGAGCCCAGAGACTAATAGACGCAGTCCTCGCGAGAACAAATGGATGTCATCGACTGGTAGCTGCGGGTCGCGCGGGCGCGTGACGCGCAGTGCGCGCCTGCGCGAGCACCGCATGTCCAACATGACGGTGTCCGTGACGCCCGCGCCGCCGCCCGCCGCCGCGCCGAGACCCGACAACAACAACGACCCGCTGGCCAAATACATGTGTCACGTCTGCGGTCGCGGCGACGTGGAGGAGAATATGCTGCTGTGCGATGGGTGCGACGACTCGTACCACACGTTCTGCCTGCTGCCGCCGCTCGCCGTCGTGCCCAAGGGCGACTGGCGCTGCCCCGTCTGTCTGGCGACAGAGGTGTCAAAACCAGCTGAAGCGTTTGGCTTCGAGCAAGCCACGCGCGAATACACGCTCCAGCAGTTTGGAGAAATGGCCGACCAGTTCAAATCTGACTATTTCAACATGCCGGTACACATGGTCCCAACATCAACGGTAGAGAAGGAGTTCTGGCGCATCGTGTCTTCCTTAGACGAAGACGTCACAGTGGAGTACGGAGCCGACCTGCACTCTATGGACCATGGATCTGGTTTCCCGACGAAATCCAGCGCCCACCTGTATCCAGGTGAGCAGCAGTACGCAGACTCCAGCTGGAACCTGAACAACCTGCCCGTGCTGGAGGGCTCCGTGCTGGGGCACATCAACGCGGACATATCAGGGATGAAGATCCCCTGGCTGTACGTCGGCATGTGTTTCGCGACGTTCTGCTGGCACAATGAGGACCACTGGAGCTACTCCATCAATTACCTGCACTGGGGGGAGGCCAAGACTTGGTACGGAGTACCAAGCTCCAAAGCAGAGCAGTTCGAGGCAGCCATGAAGGCGGAGGCTCCGGAGCTGTTCCAGCTGCAGCCTGACCTGCTGCACCAGCTCGTCACCATCATGAACCCCAACGTCCTCATGAAGGCAGGGGTTCCCGTTTACAGATTAGACCAGCACGCTGGAGAGTTCGTGGTGACGTTCCCTCGCGCTTACCACGCCGGCTTCAACCAAGGTTACAATTTCGCGGAGGCTGTAAACTTCACGCCGGCAGACTGGCTAAAGATGGGTCGCGAGTGCGTGGTGCACTACAGCACGCTGCGGCGCTACTGCGTGTTCTCGCACGACGAGCTGGTCTGCAAGATGGCGCTGGAGGCGGACGCGCTCACGCTGACCGTCGCGCTCGCCGCCTACAGAGACATGCGCGCCATGCTGCACAGCGAGCGGAGACTGCGCAAGAATCTCTTACACTGGGGCGTGACAGAGGCAGAACGCGAAGCCTTCGAGCTCCTCCCAGATGACGCGCGTCAGTGCGCTGCGTGCAAGACCACGTGCTTCCTGTCGTGCGTCACGTGCGCCTGCACCACGCACGTATCCTGTCTGCGCCACGCCGCGCTGCTCTGCGGCTGCGCTCCCTCCAAGCACACGCTCAGATACCGGTATACCCTAGATGAGCTGCCAGCCATGCTCAGCAAGCTGAAAGCCAAGTCGGAGCAGTTCCGCTCGTGGGCCGAAGCCGTGCAGAACGCGCTGGACCCCGACACGCCCAAGACCTGCGACCTGGATGGGCTACGGCACCATCTGCACAAAGCGCATCAGCTCAAGATGCAAAAAACCGAACTAGTCCGAGCTTTAGAAACAGCAATCGAAGACGCAGAGAAATGTGCGTCGGTGATCCAACAGTTAGACCTTAACAAGATGCGCACTCGCACGCGGCACCACGACCCCAAGTACCGGCTGTCCATCCACGAGCTCACGCTGTTCGCGGCCGAGATCGACAGCCTGGCCTGCGTGCTGCCAGAAGGGTCTGCCGTGAAGGAGGTGCTGCGTCAGACGTCAGAGTTCGAGACGCGCGCCAGTGAGCTCCTCAAACACGATCTGGACAAGATCGAGACATCGTACGTCAGGGATTTGGAAGAGACGGTGGAGCTGGGCGGGCGGCTGTGCATCGTCCTGCCTCAGCTGGAGGCGCTGTCGGCGCGGCTGGCACAAGCGCGCTGGCTGGAGGAGGCGCAGCAGCACCGCGAGGGCTGCACCACCCTCACGCCCGCCGTGCTGGCCGCGCTGCTCGCGCGCGCCGCCACGCTGCCGCAGCACAGAGCTATCGAGCACGAGCGGGCGCTGCTCTACGGACTGCAAGTGGAAGTCGAAGAGTGGGAGAAGAAGGCACAAGCTGTCCTCATCGACACATCCAAGTCTCCCCTCGACGAAGACAACCCTCAGTACAGCACGCTCGCCTCGCTGAGTACGCTGCTGGCGGAGGGAACAGACATCGAGGCTGCGCTGCCTTCCTACCACGCGCTGCAGTCTGCCATCGCACATGCCAAGGACTGGCTGCACAAGGTGGAAGAGATGCAGTCCTCGGACCTGTACCCGTACATCCACTCGGTAGCCGCGCTGGTGCGGCGCGCGGCATCCCTCCCGCTGGCGCTGTTGGAGAAGGAGCAGCTCAACGCCGCGCTGCACTCCGCCGAGGAGTGGCGCCGGGGGGCCGCGGACATGTTCCTCAAGAAGAACTGGAAAGGCGGGCTCCTCGAAGCGCTATCGCCACGCACGTCATTCGGCGGGGGCGCGGCGGGGCGGCGGCGCGGCGCATCATGCGGTGGCGGTGCTGGCGGCGGCGGCGGCGCGCTGGCGGACAAGTTCACGGAAAAGAGCACGCCGCACGAGATCGTCACCGCCTTCAAGCAGGCGGAGGCCAGCGAGCTGCAGGCTATCAAGGAACTCAGGGCGCGCAACACGCGCAAGGACGTGCGCGCGCCGCCCGCCACCACGGTCACCTTCTGCATCTGTCAGAAGCGCCAGTACGGAGTCATGACGCAGTGCGAGCTCTGCAAGGACTGGTTCCACGCGTCGTGCATCGCGAACGCGCGCGACGACCGCGAGGAGTCCCCGGACCGAGAGGGCTTCCCGAGCGCGGAGTCCAAGTTCCTCTGTCCAGACTGCGTGCGGACCAAGCGGCCGCGGCTCGACCGTATACTGGCCTTGTTGGTGTGGCTGCAGAAACTACCAGTGCGGCTGCCGGAGGGCGAAGCGCTGCAGTGCGTGACGGAGCGCGCAATGGCGTGGCAAGATCTGGCGCGCCACGCGCTCTCCACGCAGCACCACGAGACACAGGCGAGCCGGGAGAAGGCGGACAAACTCAACTCCGAGCTGAAAAAAGCAACCGCGCGCCTGCACGACCAGCACCACTCCAGGTCGTCAGCCAGCGTGGAGCACGCGTACAGCGCGTCCCCTCGCGGCGGCGCGGAGGGCGCGCGCCTCTCGCCCGCCGCGCTCGGCAAGCTGGAGGACCTCATGCTAGAGGGGGACCTGCTGGAGGTGGTGCTGGAGGAGCAGCGGCTCGTCTGGAACGCGGTGTGCAGCGCACGTGGGGCGGCGGGGCGGCGCGGCGCGCGCGTGCTGGATGCGGGCCGCGCCAAGCGGCGCACGCAGCACACGCACCGGCACGCCAAGCGCACGCGCACGCTGCATACACCAGGCGGCGCGGCCACGCCCCTCCCGTCTACGTCGAAGGCGAGCGGCTCGCGGCGCGGCGCCGCTACCACCAACTACCTCAACAGGAAACAGGGCGTGTCCTCCGCGTCCGGCCTGATGATGCGCAAGCACTACATGGCGCGCCAGGAGCGCCGCAAGCGAGGCGTCGCCACCAGGCATAGAGGCGGTCGCGGGCGCGTCTCCTCGCGCGGAGGCGGCGGCACGGCTGCGGCGGCGCCCCCCGACTCCTCCTCCTCGTCCGCCTCCTCGGCTGATGATGAAGATGACTGCGCTGCCGACAACTGTCTACGACCCACCGGCAAGGTGGACTGGGTGCAGTGCGACGGCGGCTGCGACGAGTGGTTCCACATGCACTGCGTGGGCGTGGCGCGGCACGCGCTCCGGGACAACGACGACTACGTGTGCGGCTCCTGCGCACTGCGTCCCGCGCGCACCTCCCAGCCCGCGTAG
Protein Sequence
MGKCDETNVEVNMGDSASPMKPDNFTFTPPPEAPVFEPTAEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGNALKIPTVERKPLDLYALHKIVREAGGFEVCSVERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDVFKSNGAVADHKDTKIEVKREATPEQVAAGGPRARSVSKCGTSPAPATAPSPARRYKAEPEAAEGSHTEGALPPNSDKGMKTPVKEESPETNRRSPRENKWMSSTGSCGSRGRVTRSARLREHRMSNMTVSVTPAPPPAAAPRPDNNNDPLAKYMCHVCGRGDVEENMLLCDGCDDSYHTFCLLPPLAVVPKGDWRCPVCLATEVSKPAEAFGFEQATREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEKEFWRIVSSLDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYADSSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRLDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECVVHYSTLRRYCVFSHDELVCKMALEADALTLTVALAAYRDMRAMLHSERRLRKNLLHWGVTEAEREAFELLPDDARQCAACKTTCFLSCVTCACTTHVSCLRHAALLCGCAPSKHTLRYRYTLDELPAMLSKLKAKSEQFRSWAEAVQNALDPDTPKTCDLDGLRHHLHKAHQLKMQKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLSIHELTLFAAEIDSLACVLPEGSAVKEVLRQTSEFETRASELLKHDLDKIETSYVRDLEETVELGGRLCIVLPQLEALSARLAQARWLEEAQQHREGCTTLTPAVLAALLARAATLPQHRAIEHERALLYGLQVEVEEWEKKAQAVLIDTSKSPLDEDNPQYSTLASLSTLLAEGTDIEAALPSYHALQSAIAHAKDWLHKVEEMQSSDLYPYIHSVAALVRRAASLPLALLEKEQLNAALHSAEEWRRGAADMFLKKNWKGGLLEALSPRTSFGGGAAGRRRGASCGGGAGGGGGALADKFTEKSTPHEIVTAFKQAEASELQAIKELRARNTRKDVRAPPATTVTFCICQKRQYGVMTQCELCKDWFHASCIANARDDREESPDREGFPSAESKFLCPDCVRTKRPRLDRILALLVWLQKLPVRLPEGEALQCVTERAMAWQDLARHALSTQHHETQASREKADKLNSELKKATARLHDQHHSRSSASVEHAYSASPRGGAEGARLSPAALGKLEDLMLEGDLLEVVLEEQRLVWNAVCSARGAAGRRGARVLDAGRAKRRTQHTHRHAKRTRTLHTPGGAATPLPSTSKASGSRRGAATTNYLNRKQGVSSASGLMMRKHYMARQERRKRGVATRHRGGRGRVSSRGGGGTAAAAPPDSSSSSASSADDEDDCAADNCLRPTGKVDWVQCDGGCDEWFHMHCVGVARHALRDNDDYVCGSCALRPARTSQPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00632545;
90% Identity
iTF_00699881;
80% Identity
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