Edod020328.1
Basic Information
- Insect
- Eupithecia dodoneata
- Gene Symbol
- nfxl1
- Assembly
- GCA_947044255.1
- Location
- CAMRHC010000155.1:170696-172271[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.022 1.6e+02 2.7 1.0 11 19 1 9 1 9 0.96 2 15 1.5e-05 0.11 12.8 19.9 3 19 46 62 38 62 0.86 3 15 1.2 8.8e+03 -2.8 3.3 7 13 66 72 66 74 0.74 4 15 3.7e-07 0.0028 18.0 17.0 1 18 96 113 96 114 0.97 5 15 2.1e-08 0.00016 21.9 16.9 1 19 123 141 123 141 0.99 6 15 2.2 1.7e+04 -3.7 0.8 5 10 169 174 169 174 0.77 7 15 0.00019 1.4 9.3 6.4 9 19 189 199 187 199 0.89 8 15 0.0004 3.1 8.3 7.1 1 12 209 219 209 219 0.96 9 15 0.33 2.5e+03 -1.0 3.3 14 18 248 252 248 253 0.85 10 15 3 2.3e+04 -4.4 5.0 8 12 269 273 268 284 0.62 11 15 1.5e-06 0.011 16.0 6.6 1 11 289 299 289 300 0.98 12 15 0.63 4.7e+03 -1.9 1.5 15 18 314 317 313 318 0.82 13 15 2.3e-05 0.18 12.2 12.5 1 18 329 346 329 347 0.86 14 15 3 2.3e+04 -5.1 1.6 6 10 378 382 378 383 0.41 15 15 1.1e-05 0.083 13.3 13.8 1 16 388 402 388 406 0.93
Sequence Information
- Coding Sequence
- CATTCTGGCATCTGTGAGAAGTGTCCGAATTCTGGCATGAGATCCTGTCCCTGCGGAGCCAACCAAAGATATGTGCAATGTCCCGACACCATGGAGACCTGCCTGGGGACCTGCGGGAAGCAGCATGAGGGGTGTGAACACAGCTGCCCGGAGAAATGCCACAAGGGAGCCTGCCCTCCCTGCCAAGTCATGATCCAGAAGAAGTGTCACTGTGGCTCGCACATGCGGTCCTTGCCATGCAGCAAGGAGTATAAGTGTGACACTAAATGTAGAGGGACCAGGCCTTGCGGAAAGCACAGCTGTGCCAGGAAGTGTTGCAATGGAAACTGCCCGCCGTGTGAAAAGGCGTGCGACAAGCCCCTGCAATGCGGCCGCCACAAGTGCACTACCATCTGCCACCACGGGCCTTGCTACCCATGCCCCCTGGAATCTAAAGTAGCCTGCAAATGCAAGGAAACCTACGTCACAGTCCCATGTGGCCGAGAGCGCTTCACGAAGCCACCAAAATGTAGCCTCCCGTGCCAAGTGAAGTACAAATGTGGACATCTTGAAGAAAATAAGCATTCCTGCCACTTCGGAGACTGTCCTCCTTGTAAAGCAATCTGCTACAAAGCATACCCAAAGTGTGGTCACGAGTGCAAAGCCGTTTGTCATTCATATAAAGCTGTAGTCTTCAAGCAGATCGAGAAACCCGCCACTCCGTGGGATATACAACCCCCGAAGACTAAGATCATGACCTTGGAATGTCCTCCCTGTAACCAACCTGTCTCCGTGGTCTGCTTCGGCGAGCACGAGACCGATAGCCAGCCGTGCCACACGGCGGCTCGGCGCCCCTGCGGCCGGCCGTGCGGGAAGCCGCTAGCCTGCGGAAACCACACCTGTACTCAACTCTGCCACCTGAGCGCCCCCGATCCTAACTACCCAAACGTACCATCCAGCTGCAAACCTTGTAATAGAGAATGTGCTAAGGTACGTCCCGCGAAGTGCTCGCACAAGTGCGCCCGGCGAGCGTGCCACCCCGGCGCATGCCCGCCGTGCGCCGTACTAGAGCGTGTGCCGTGCCACTGCGCCGTCACCGAGCTCTATCTCAAGTGCACGGAGTACTGCGGCGCCACCGAGGAAATGTTGTCATGCAAGCAGCAGTGCCCCAGGAACCTGGCGTGCGGACACCGCTGCAAGAACAACTGCCACTCGGGACCCTGCGGCGAACAGATCTGCATCAAGAAAACTAAGATACACTGCCCCTGTGGCAACTTGAAGAAGGAAGCACCTTGCAGTATCGTCAGAAGTGGCGATGCTAAGGTCGCGTGTGATGACTCCTGCGAAGCTAAAAAAGATGCAGCAAAGCGGGAGAAAGAGATGGAACAACAGAGGCTGAAGCAGCTGGAGGAGGACAGGAACAGGCGCGAGCTGGCAGAGTATGAGTGGAAGCTCAGCGGAAAAAAGAAGAAGTATAAGGAAAAGAAGATTGTGACAGACATACAGCAGAAGAATTGGCTACAGAAATATTGGATAGCACTATTGGCGGTTTTAGTTGTGATTATTGCAACAGTTTACTCTAGTTACCTTATTTAG
- Protein Sequence
- HSGICEKCPNSGMRSCPCGANQRYVQCPDTMETCLGTCGKQHEGCEHSCPEKCHKGACPPCQVMIQKKCHCGSHMRSLPCSKEYKCDTKCRGTRPCGKHSCARKCCNGNCPPCEKACDKPLQCGRHKCTTICHHGPCYPCPLESKVACKCKETYVTVPCGRERFTKPPKCSLPCQVKYKCGHLEENKHSCHFGDCPPCKAICYKAYPKCGHECKAVCHSYKAVVFKQIEKPATPWDIQPPKTKIMTLECPPCNQPVSVVCFGEHETDSQPCHTAARRPCGRPCGKPLACGNHTCTQLCHLSAPDPNYPNVPSSCKPCNRECAKVRPAKCSHKCARRACHPGACPPCAVLERVPCHCAVTELYLKCTEYCGATEEMLSCKQQCPRNLACGHRCKNNCHSGPCGEQICIKKTKIHCPCGNLKKEAPCSIVRSGDAKVACDDSCEAKKDAAKREKEMEQQRLKQLEEDRNRRELAEYEWKLSGKKKKYKEKKIVTDIQQKNWLQKYWIALLAVLVVIIATVYSSYLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -