Basic Information

Insect: Eupithecia dodoneata
Gene Symbol: -
Assembly: GCA_947044255.1
Location: CAMRHC010000060.1:106837-109110[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.74 45 5.1 0.3 3 23 39 59 38 59 0.97

2 8 0.062 3.8 8.5 1.2 2 23 161 183 160 183 0.93

3 8 1.3e-05 0.00083 20.0 0.9 1 23 196 219 196 219 0.97

4 8 4.2e-05 0.0026 18.4 3.5 2 23 260 281 259 281 0.97

5 8 0.00089 0.054 14.3 5.4 1 23 287 309 287 309 0.97

6 8 1.6e-05 0.00096 19.8 4.3 1 23 315 337 315 337 0.97

7 8 1.4e-05 0.00083 20.0 2.4 1 23 343 365 343 365 0.97

8 8 0.12 7.1 7.6 4.2 1 20 371 390 371 392 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.74	45	5.1	0.3	3	23	39	59	38	59	0.97
2	8	0.062	3.8	8.5	1.2	2	23	161	183	160	183	0.93
3	8	1.3e-05	0.00083	20.0	0.9	1	23	196	219	196	219	0.97
4	8	4.2e-05	0.0026	18.4	3.5	2	23	260	281	259	281	0.97
5	8	0.00089	0.054	14.3	5.4	1	23	287	309	287	309	0.97
6	8	1.6e-05	0.00096	19.8	4.3	1	23	315	337	315	337	0.97
7	8	1.4e-05	0.00083	20.0	2.4	1	23	343	365	343	365	0.97
8	8	0.12	7.1	7.6	4.2	1	20	371	390	371	392	0.93

Sequence Information

Coding Sequence: ATGAGCGGCCATGCAGCATCTTTACCATGTCCAATATGCTCACATACGAGTGTTTTTGATTCACCTGAATCGCTACGCGATAGATTAATTCATGTGTCAACTAATAAAATACTGTGTCCAGTGTGCCAAGAAGAAATTTGTGGATTAGATAAATTGACCATACATTTATTCAGCCATGTTAAGCCTTTAACGCTTAAAAGAGCAGAAATAGATAAAGGTTGCGAAATTAAGcaaaaaatgaaaatagaaGTCGAGGGAGCCCAACTGAAGAAATCTAAGTCTTctgctaaaaataaacaagcgTGTTCGATAGCAAGTGCACCTGTGAAATACGTCAAGATATACCCAAAGCTTCCGGTTATATCACTGAATTCTTTACCTTTATTGGACCTGCCCCAAAACCCAAAGATAGATCATATAATAAAAACCGGTGAGCCACTAATTGTGAAAACAGAACCTCATATTATACCACCGAATACTACATGCAATATGTGTGGTTTGCAGTTTGTTGaccaaaacattttaaaaatgcaCAGATGTTTGATTCATAACATAGATGATACTGCAAATGATACTGCAACTCGATATAATTGCCATTTGTGCCCCAAAAATTTCAAAATGCGTGGATCTTTGATGGTTCATTTACGAGTAGCACACTACGGATTTTCATCTGAAAATGGCAATAACGTTAATGAATCACAAGACAAAACAGATAGCACGAACTCTGATAAACAAAAAAAGTCGCAGAGTTTTGATAGAACCGACAGCAAGCAATGGCAGTGtgatgtttgtaaaaaatactttaccaCGAAGTACTTCTTGAAAAAACATAAACGTCTCCATACaggaGAAACCCCTTATGCGTGTACGCAATGTAATAAGACGTTTACATTTCAACAGTCATATCACAAGCATTTGCTCTACCATAACGATGAGAAACCACACTCCTGCACCTACTGTGGCAGAGCCTTCAAAGAACTATCTACGCTGCATAATCACCAAAGGATACACACCGGAGAAAAACCATTTGCCTGTGAAACATGCGGTAAATGCTTTCGACAAAGAGTTTCTTACTTAGTCCACCGACGTATACACACAGGAGTGATGCCTTACAAGTGCACGGCGTGTGAGAAGACCTTTAGATATAAGGTGTCCCAACGAACCCATAAATGTCAGGCTCAACCACCAGGCACTGTCGTTCGACAAACGGGAGAACTTGTGGAGATGCTAAAGAAGAAGCATACGGATCAAAtatgtgatgaaattaaaattaatcatcATGAAACTGCCTTTCCAGAAATATCTGAAGCGAATGCTGAGCTAGTTAGAACAGGAGCAAAACTGTCATTGGAAGATATGGAAACGGAGAGCTTTAGAATACTGGGTGATAGTTTCAATAACGAAACTGCATCACTTCAACCAACTTCGTGTTATTCTCCGGATGTAGTAAATGAATATAGACATAAACctgataaaatatttgaaacgaaTATAGAAGAACTTATTTCAACAAATGATGTAGAAGACAATAAAAATTTACCATCACCGTCAGATATCCTAAGAAACTTATGTTTATCAAGAGAAGAAGATTTAGCAGTAGATCAAGCTACGGAACTAAGTCACTATTTATAA
Protein Sequence: MSGHAASLPCPICSHTSVFDSPESLRDRLIHVSTNKILCPVCQEEICGLDKLTIHLFSHVKPLTLKRAEIDKGCEIKQKMKIEVEGAQLKKSKSSAKNKQACSIASAPVKYVKIYPKLPVISLNSLPLLDLPQNPKIDHIIKTGEPLIVKTEPHIIPPNTTCNMCGLQFVDQNILKMHRCLIHNIDDTANDTATRYNCHLCPKNFKMRGSLMVHLRVAHYGFSSENGNNVNESQDKTDSTNSDKQKKSQSFDRTDSKQWQCDVCKKYFTTKYFLKKHKRLHTGETPYACTQCNKTFTFQQSYHKHLLYHNDEKPHSCTYCGRAFKELSTLHNHQRIHTGEKPFACETCGKCFRQRVSYLVHRRIHTGVMPYKCTACEKTFRYKVSQRTHKCQAQPPGTVVRQTGELVEMLKKKHTDQICDEIKINHHETAFPEISEANAELVRTGAKLSLEDMETESFRILGDSFNNETASLQPTSCYSPDVVNEYRHKPDKIFETNIEELISTNDVEDNKNLPSPSDILRNLCLSREEDLAVDQATELSHYL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00696801;
90% Identity: iTF_00699616;
80% Identity: -