Edod012776.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupithecia dodoneata
Gene Symbol
ZBTB41
Assembly
GCA_947044255.1
Location
CAMRHC010000069.1:772805-774241[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.00039 0.024 15.4 3.5 2 23 165 187 164 187 0.95
2 10 0.17 10 7.1 1.2 2 21 193 212 192 213 0.92
3 10 0.25 15 6.6 1.6 1 23 235 257 235 257 0.94
4 10 0.0019 0.11 13.3 0.5 1 23 263 286 263 286 0.94
5 10 0.00017 0.01 16.6 9.3 2 23 294 315 294 315 0.98
6 10 7.9e-05 0.0048 17.6 1.3 1 23 324 346 324 346 0.98
7 10 8.2e-05 0.005 17.6 0.1 1 23 352 375 352 375 0.96
8 10 1.9 1.1e+02 3.8 1.9 1 23 381 403 381 403 0.90
9 10 0.0034 0.21 12.4 0.1 3 23 410 430 408 430 0.98
10 10 0.00016 0.0096 16.7 6.4 1 23 435 458 435 458 0.96

Sequence Information

Coding Sequence
ATGGGGGAGTCCAAGAAAAGTACTGCTATTTGCAGAGTTTGTTTGAGTTATGACTTTTATAAGGAAGATGGCAAAGGTTTATCATTGTTTGAAGAATACAATGATTGTGTTATCTCGGACAAAATCAATGCTCTTGCCCAAGTCGGCATCAAAGAAGGTGATGGTTTGCCCGATAGGATTTGTCCAGAATGCCTTCTTGAGCTCGAAAACGCATTCATGTTCAAATTGAAGTGTGAAAGAACCAATAAAATCCTACTCTCTGCCGTGATCGACGCTCCTACCTTCGAAGGCAATGATGGTGACGTCAATGTTGATGAACTCCTTCTCAATATGAAAGAAGAATaccttgatgatgatgacgatggtgATTATGTAGAACTGGATGATCATCTTACTTTAGCTGACATAAAGGCCTCTCGGTCTAATTCTTTGGAAACCGAACCACCTGCAGCAGCTCTACCTAAACCCAGTAAAgcaattgatttgaaattaatATGCCATGACTGTGGAGGATCTTTCAAGAGCAAGTGCAAGCTCAGAGTGCACTGGAAGAAAGTGCATTTGACTGAAAACCTGAAATGTGAAAACTGCTTAAGAAGGTTCAAATCTTTTGCAGCCTTCAGTTCACACAAAAAGCAAAACTTGAAAAGCTGTCTTGTTGCGAGAAAAGTACGTATTGAAGGTGAGGGGAAGAACCGTATCTTCCACTGCAAAGAATGTGACTATCATAGCAAGCGAATCAAAGATGTGGGAGCCCATATTGTTATTCACACTGGTGAGCGACCATACCAATGTGATCTCTGTCTGAAGTATTTTACCCAACTTAGTTCTGTGAACGCCCACAAAGAAAATGCACATAGACTTTTTAAAACAGAAGGAACATGTCATCACTGTGGGAAACATTTCAAAGGTCGTTCAaaattatacaaacatttgcgATCCCACAAGAAAAGCAGTTTCCCGGATGGTTTTCCCTGTAACATTTGTAAAGCAgtgcttaaaaataaaaatagtttccaAACCCATATGAAAAGACATTCTGGTATAAAGGCCTACTCATGCGAGGTTTGTCCAGCCTCTTTCTTTAGTCCAAGTGAACTTTGGAGCCATAGAGAGAAAGTTCACATTAAATCGAAAACATACTCttgtaatatatgtaagtactcAAATCTCTCAAGCTATTATATAAAGAAACATATGGTGAAGCATACAGCTTCAAACTTTGGCTGTAATCTTTGTGGTATGATTGTTGAAAATGAGTATCAACTAGAACTTCATCAGAAGAGGCATACAGATAGGAACTACTTCTGTTCCCATTGTGATAAGACATACTACTCTAAGAAGAATCTATTAGCACATGTTCGGCACAAGCATAAGTTTGTTATGTTGAATGGACCTCCAGCTAGCAAAAATATGAAGGACTCTGTTAAAAGTTAA
Protein Sequence
MGESKKSTAICRVCLSYDFYKEDGKGLSLFEEYNDCVISDKINALAQVGIKEGDGLPDRICPECLLELENAFMFKLKCERTNKILLSAVIDAPTFEGNDGDVNVDELLLNMKEEYLDDDDDGDYVELDDHLTLADIKASRSNSLETEPPAAALPKPSKAIDLKLICHDCGGSFKSKCKLRVHWKKVHLTENLKCENCLRRFKSFAAFSSHKKQNLKSCLVARKVRIEGEGKNRIFHCKECDYHSKRIKDVGAHIVIHTGERPYQCDLCLKYFTQLSSVNAHKENAHRLFKTEGTCHHCGKHFKGRSKLYKHLRSHKKSSFPDGFPCNICKAVLKNKNSFQTHMKRHSGIKAYSCEVCPASFFSPSELWSHREKVHIKSKTYSCNICKYSNLSSYYIKKHMVKHTASNFGCNLCGMIVENEYQLELHQKRHTDRNYFCSHCDKTYYSKKNLLAHVRHKHKFVMLNGPPASKNMKDSVKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00706380;
90% Identity
iTF_00696782;
80% Identity
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