Edod007069.1
Basic Information
- Insect
- Eupithecia dodoneata
- Gene Symbol
- Dpy19l1
- Assembly
- GCA_947044255.1
- Location
- CAMRHC010000035.1:989600-1032070[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.72 44 5.1 0.0 3 23 165 185 163 185 0.95 2 12 0.0009 0.055 14.3 1.9 1 23 287 309 287 309 0.99 3 12 0.00022 0.014 16.2 0.6 1 23 315 338 315 338 0.96 4 12 4.6 2.8e+02 2.6 6.0 1 23 343 366 343 366 0.89 5 12 1.8e-06 0.00011 22.8 1.3 2 23 555 576 555 576 0.97 6 12 0.013 0.8 10.6 3.0 1 23 582 604 582 604 0.97 7 12 0.12 7.6 7.5 5.5 1 23 668 690 668 690 0.96 8 12 0.0026 0.16 12.8 0.7 1 23 726 748 726 748 0.96 9 12 0.001 0.061 14.1 0.7 1 23 756 778 756 778 0.92 10 12 0.043 2.6 9.0 2.2 1 23 787 809 787 809 0.98 11 12 0.00019 0.011 16.4 0.9 3 23 935 955 934 955 0.98 12 12 0.019 1.2 10.1 5.6 1 23 972 994 972 994 0.97
Sequence Information
- Coding Sequence
- ATGGACATAGATCCTCTCAGCTATGGGCAGTACAATTCATTCCACCCTCCCTTCCATTCCCAACCTAATATCACAAATACACAGCCCAATAACATAAATTCACATCCCAATCTTACAAACACCCCTCCCAGTGTCATAGATACACAGCCTAATATATCGAATACACAGCTAAATACCCCGCAGACACAATCAAATATCACAAATACACAGGCGTCCCATCTTACACCTATACCCTACCCTTACTACCCACAACAGTTACCATACAACCAAATAGCCAACTGTGAACCAACCCAAGCCATCCAAAACCCTATCAACCAATACCCGAATATGCCAGAAGAAGTGACCAATGAGATCACAGAACCGATACCCGAAGAAGAGGACATTAAGCCAGACATAtcgaaaataaaacttaagaaacCTAAACGATTGAAAGGTAAAACAAGCAACTATTGGAATAAGAAGATTACGGATAAAGAATTTAAGTTCTACGGTTGTGCGGTCTGTAATATTGCATTCCAAGACCTAACCGAGCTCGATTCGCATGTAACAATCCATAGCAACCGAGTAACCAGCTACGATATAAGACTGCAGAATCAGAAGAAGAGGAAACGGCTCAAGAaggagaaaaaaaagaaaaagaaagaagcAAAAGTAAAGAACGAGTTCAATTTAGATATTAAACCTGAAGACGGCTACATAGGTACGGAGAAAGTTGGGGATGTCAAACCTGACATCTGTCAAACTGAAAACAACAGCTGTGATGTTAGAAAGAATAAAAAAGATGTTAAAACTGATGAAAATGGAACAGAAAAGGATTTAGCTAAAGAGAAAGATGCAACTAATCAAAAAGATGCAGTGTACAAGTGTTTCGCTTGTAACAAgaaatttgcattaagttaTTATCTGAAGATTCATGTCCGATCTCATACTGATGAAAAACCCTACATCTGTAACTTTTGCGGGCAGACCTTCATAACGGCGAGTAAACTCGGGCGCCACAACAAGCGTATACATCTCTCAGTGCGACATCAATGCAGGATATGTTATAAATCCTATCATAgATTCGAAGTACTAACGAAACATTTTGACCAAAAGCACGCGGACCAGAAACTAGAAGGCGAACCATACGATTACAACGCCATCCTACCATACCTAACAGCGGAACTAGAAGACCAGTTCAAAGAAGAAAACACGAAGAAGCCTAAATCTGAGGATATATGGGGGGATGCCCCGCTGGAGAGTTTGGATCCTGTGGGGACCAAGGAGGCTGGTGTAGATGCTGAGAAGGCTGCAATCGACTACCTCAAGGTGGAGTTGCCTAAGCTTGAGAAAGAAGAAAAGgatattagaaataaatacaagATAGAAGAGATAGAAGTGAAATGCGAGAGAGAAGAGACAGACGGACAGGACGGACTGTCCGGGTCCGAGCTGATTGACGAGGTGTACGACCCGGCGAGCTCCGATGATGAAGTGGAGCCCAAGAGTTGGAGACCAGGGCTGAGGGAACCGGTGAAGGAAGAGGAGGCTGTTAAAGAGGAGAGGTCCCTCTCAGACGACGAAGAGGAATACTTCCCCCCGGACGGCTGGGCGCGCTCCCCCCCTCCCGCGTCGCCCCCCCGCGCCGCCTCCCCCCCTCCCCGACGTAAGGGAGGGCCGGGGGTGTGCGAGCTGTGTAACCGGACCTTTAGCAGTCGTAGCTACTTGAAGGTGCATTTGAGGACGCATACTGGCGAGAAACCATTTGCGTGCTATATCTGCCACCGCGGCTTCATAACGGCGAACAAGATGCACCGGCACGTGCTCACGCATGACGAGACCTGGGTTGGCGAAAACTGCATAAAACCAGAAACAGCTGATATCAAGGCAGAAGCGGACGAAGACGATAATACagagaaaaaagataaaaaATCAAGTAAAGTAGAAAAAGCGAAAAACAAAATTCTAAAGAAGTTGAATCAGAAGATAGACCCGAAACTAAAAGGGAACCGCAGCTGGCAGCACCGCTGTGACTACTGTGATAAGAAATTCCTTCACTTCGAGACGCTGCAGGTTCACAAGAAAGCGCACGCGGGAGAGGAACTAATTCTGAAGTGCAGATACTGTCTGGAACCACAGCTCGATCAgGAGTCCAAAGAAACACATGAACAAACCCACGCCGGGCAGAAGAAGCCGTATTTATGTACGCTCTGCGGACgaaattataaaaactctgcGGCCATGATCTACCACCGCCGTAACCACAAGGCGGATTCCGAGAAGCCATTCATCTGTGATATTTGCTCAAAGAGGTTCGACTCGCACGCCAAGCTCGCCAGGCATATACCCACGCATTCCACTGaaaaGTTCGTGTATCGCTACGAGTGTCCTGTCTGCGCCAACATGTTCCACACGCGCTGGCACGTGCAGATGCATCTCAAGTCGCATCAGAAGGAGGGCCTaatACTAGAAGAGAACCGCAACGCAGTCCTAGCCATGGTGCTCCAGAACGCGCGTAAGATACCGCTGGGGCCCCCGGCGGAGAGCCGAGGGGCCCCCACGGTCCCCCCGATACCTGCGGGCGATGAGCGGTCGCGGATATGTAATATATGTGGACAGAACGCGCGTAAGATATCGCTGGGGCCCCCGGCGGAGAGCCGAGGGGCCCCCACGGTCCCCCCGATACCTGCGGGCGATGAGCGGTCGCGGATATGTAATATATGTGGACAGAACGCGCGTAAGATATCGCTGGGGCCCCCGGCGGAGAGCCGAGGGGCCCCCACGGTCCCCCCAATACCTGCGGGCGATGAGCGGTCGCGGATATGTAATATATGTGGACAGGTGTTCCAGCACTTCTACTATTTAGAAGAGCATCTCAAAACACACGGGAACAAAATAGCTGTGACCGACTTAGAAGAAGAGGAAGAAAAGAAATACACCTGCCAGGTCTGCTCAAAGTCCTTCAAACTCCACTACTATCTAAAACTACACAGCTTCACCCACACTAAAGAAAAACCCTTCATCTGTCAACAGTGTGCATTCACCGCAGGCTACATCCACTACAGATACGTGTCCGTCCTCTTCGAGAATGACCGGAACTTCTCTCATCTGTCAGAGATGGAGAGAGAGATGTCTCTGCAGTCGGAGCTGGGGTTCTACTACTCATATTACAAGACTGTGGTATATGAGAGACCATTTATGGTgggtattagcaagctgatgtaTGATCGACTGGTGGAGTTCCCCAACGAGGTGAACGCGTTCAACAGATTCAATATACACCCTGAAGTATTAATAGCCGCTGTTTACCGTTACTTCGAGCCGGCAATAAACACCTCAGCCCACAGGGAGTGCCACATAGTGTCGCGGGGCGAAGGCCTAGCGCCCGTACAGAGCTGCGTAGGGCTCGGCGAGCCGGTGATGTTCTATCTGGAAGCTGTGTGGATACTGCAGGGTGGTTATGTGGCGGCGCTGTTTCTGCAGGCTACAGCGCTGAGTAACACAATCCTCGGCGGTCTACTAGCTGTAATCCAATTCTTTGCGAACCACGTCGAGTGCACTCGCGTGCATTGGTCGCCCAACCAGCGCGAGAACATGGCCGCGCCCTTCCTGGCGCTGCAGCTGTGGCTCGTGAGTGTACAGCTGCGGGACAGAGACAAACGCACGCAGCTACCCATGCAGATCTCAATTTTCGTCCTAAACTGCATTTGCCTTCTATTCTGGCAGTTCACACAGTTCATATTCCTTACACAACTTCTGATATTCTTTATTATGGAACAATTCAGAATAATCGACGTTAAAACCCTCTGCATATTACTCCACTCTCATTTCTGTGGTCTACATATGGCTGTATTACTTCTGCAAGGAAATGATATCGTGATTAATGTAGTCAAAACTTGGTTCATAACTGCGTATAGCAAgtataaacaagataaaatcaCCATAGACAAGAAAAAAGAAGCTGAAGACACTTCATCCGACGAAGACAGTGGCATAGACACAGAAGTGAAacaagataaacttagcaaccAAAGAGAAATGAAAATCAAAGACGGTTTTATGTGTTTCTTGAAGCATTTGAGGATAGAGCCAGCGATATTCTACAATATATCTCAGATGGTTGTCTATGGTGTCATGGCGGGCCTTGTAATGAGGTTGAAGCTGTTGTTTGTGCCACAAATGTGTGTGGTGTCTTCCCTTATGATGAACAAACAGTATTACAAgttgccaaataaatatatgaagtaTATATTGTTTCTCTGGGCTTTAAGTATTCTGCCAGTGCTAAGGACTCTGAGGAACAACGTGAAAGAAGAATTATCTTATATTGgTGAATACAGCGAGCCGCATAAAGAACGGCTTATGGAGTGGATACTGTCTGAGGGCAGTCGCAGCGTGTTCGCGGGTTCGATGCCGCTCATGGCCACCGTGCTGCTGGTGGCGAGGCGGGCCGTGGTGGCCCATCCACACTACGAGCATAAAGAGGCCAGacaacGTGCATACGCCGTGTACAAGATGTACGGGCGCTTCGCTCCACAAGAGCTTTACGAAGAGTTGTTCAAGCTGCGGGCGACCCACCTCATCGTCGAGACCAACTACTGCTATGGGCGCAGCAGCTCCGGTTGCACCTACAACGACATCTGGGAGGCGGACGCGGCCGCGGGGGGCCCCCGCCTGCAGGGAGGGGCCCCCCTATGCGTGGCCCtcctgcgcgcgcgcacgccgCACCTCTACCCCGTGTACAGAGACCCGCACTACGCTGTGTTCAGAGTACACGACTATAGCGTCAGCTATATGCCTCGAAGCTTCGACACCTGA
- Protein Sequence
- MDIDPLSYGQYNSFHPPFHSQPNITNTQPNNINSHPNLTNTPPSVIDTQPNISNTQLNTPQTQSNITNTQASHLTPIPYPYYPQQLPYNQIANCEPTQAIQNPINQYPNMPEEVTNEITEPIPEEEDIKPDISKIKLKKPKRLKGKTSNYWNKKITDKEFKFYGCAVCNIAFQDLTELDSHVTIHSNRVTSYDIRLQNQKKRKRLKKEKKKKKKEAKVKNEFNLDIKPEDGYIGTEKVGDVKPDICQTENNSCDVRKNKKDVKTDENGTEKDLAKEKDATNQKDAVYKCFACNKKFALSYYLKIHVRSHTDEKPYICNFCGQTFITASKLGRHNKRIHLSVRHQCRICYKSYHRFEVLTKHFDQKHADQKLEGEPYDYNAILPYLTAELEDQFKEENTKKPKSEDIWGDAPLESLDPVGTKEAGVDAEKAAIDYLKVELPKLEKEEKDIRNKYKIEEIEVKCEREETDGQDGLSGSELIDEVYDPASSDDEVEPKSWRPGLREPVKEEEAVKEERSLSDDEEEYFPPDGWARSPPPASPPRAASPPPRRKGGPGVCELCNRTFSSRSYLKVHLRTHTGEKPFACYICHRGFITANKMHRHVLTHDETWVGENCIKPETADIKAEADEDDNTEKKDKKSSKVEKAKNKILKKLNQKIDPKLKGNRSWQHRCDYCDKKFLHFETLQVHKKAHAGEELILKCRYCLEPQLDQESKETHEQTHAGQKKPYLCTLCGRNYKNSAAMIYHRRNHKADSEKPFICDICSKRFDSHAKLARHIPTHSTEKFVYRYECPVCANMFHTRWHVQMHLKSHQKEGLILEENRNAVLAMVLQNARKIPLGPPAESRGAPTVPPIPAGDERSRICNICGQNARKISLGPPAESRGAPTVPPIPAGDERSRICNICGQNARKISLGPPAESRGAPTVPPIPAGDERSRICNICGQVFQHFYYLEEHLKTHGNKIAVTDLEEEEEKKYTCQVCSKSFKLHYYLKLHSFTHTKEKPFICQQCAFTAGYIHYRYVSVLFENDRNFSHLSEMEREMSLQSELGFYYSYYKTVVYERPFMVGISKLMYDRLVEFPNEVNAFNRFNIHPEVLIAAVYRYFEPAINTSAHRECHIVSRGEGLAPVQSCVGLGEPVMFYLEAVWILQGGYVAALFLQATALSNTILGGLLAVIQFFANHVECTRVHWSPNQRENMAAPFLALQLWLVSVQLRDRDKRTQLPMQISIFVLNCICLLFWQFTQFIFLTQLLIFFIMEQFRIIDVKTLCILLHSHFCGLHMAVLLLQGNDIVINVVKTWFITAYSKYKQDKITIDKKKEAEDTSSDEDSGIDTEVKQDKLSNQREMKIKDGFMCFLKHLRIEPAIFYNISQMVVYGVMAGLVMRLKLLFVPQMCVVSSLMMNKQYYKLPNKYMKYILFLWALSILPVLRTLRNNVKEELSYIGEYSEPHKERLMEWILSEGSRSVFAGSMPLMATVLLVARRAVVAHPHYEHKEARQRAYAVYKMYGRFAPQELYEELFKLRATHLIVETNYCYGRSSSGCTYNDIWEADAAAGGPRLQGGAPLCVALLRARTPHLYPVYRDPHYAVFRVHDYSVSYMPRSFDT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -