Basic Information

Insect: Eupithecia dodoneata
Gene Symbol: -
Assembly: GCA_947044255.1
Location: CAMRHC010000120.1:1985295-2013309[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 6.2e-07 3.8e-05 24.2 1.5 1 23 25 47 25 47 0.97

2 13 0.0041 0.25 12.2 0.2 1 23 52 75 52 75 0.95

3 13 2.7e-05 0.0017 19.1 2.8 1 23 81 103 81 103 0.98

4 13 0.00073 0.045 14.6 8.9 1 23 109 131 109 131 0.98

5 13 0.00022 0.013 16.2 0.6 1 23 138 161 138 161 0.93

6 13 0.7 43 5.2 0.7 2 23 170 192 169 192 0.93

7 13 7.3e-05 0.0045 17.7 1.6 2 23 199 220 198 220 0.97

8 13 0.022 1.3 9.9 3.0 1 23 226 250 226 250 0.93

9 13 0.00077 0.047 14.5 3.1 1 23 255 278 255 278 0.96

10 13 7.9e-05 0.0048 17.6 0.7 2 23 286 308 285 308 0.97

11 13 0.059 3.6 8.5 0.5 1 23 316 339 316 339 0.95

12 13 5.1 3.1e+02 2.5 4.9 1 20 944 963 944 966 0.90

13 13 0.83 51 4.9 2.5 1 23 1117 1139 1117 1139 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	6.2e-07	3.8e-05	24.2	1.5	1	23	25	47	25	47	0.97
2	13	0.0041	0.25	12.2	0.2	1	23	52	75	52	75	0.95
3	13	2.7e-05	0.0017	19.1	2.8	1	23	81	103	81	103	0.98
4	13	0.00073	0.045	14.6	8.9	1	23	109	131	109	131	0.98
5	13	0.00022	0.013	16.2	0.6	1	23	138	161	138	161	0.93
6	13	0.7	43	5.2	0.7	2	23	170	192	169	192	0.93
7	13	7.3e-05	0.0045	17.7	1.6	2	23	199	220	198	220	0.97
8	13	0.022	1.3	9.9	3.0	1	23	226	250	226	250	0.93
9	13	0.00077	0.047	14.5	3.1	1	23	255	278	255	278	0.96
10	13	7.9e-05	0.0048	17.6	0.7	2	23	286	308	285	308	0.97
11	13	0.059	3.6	8.5	0.5	1	23	316	339	316	339	0.95
12	13	5.1	3.1e+02	2.5	4.9	1	20	944	963	944	966	0.90
13	13	0.83	51	4.9	2.5	1	23	1117	1139	1117	1139	0.97

Sequence Information

Coding Sequence: ATGGCTAACACAAAGAATAAAGCTAAGACAAAAGGCCCAAGCAAGAATGGCAAAAAGCCAAAAAAGAAACCTTTCAAATGTAAAGAATGCGGTAAGTCATTCAGCGACCGCTACTACCTGACCAGTCATGAGTTGATCCACACAGATGAGACTTTCCCCTGCCCGTTGTGTCCCTACGTAGGCAACACTAAGAAGTACCTCGCGAGGCACAATAGacagGTGCACAAAGAGCGCAACCAACACAAATGCACCTACTGTGGTAAAGCCTTCTTGCATCCGAATAATCTCAGAAACCATATTATGGTGCATACCGATGAGAAACCATTTCGCTGTTCGTTCTGTGACTATTGCTGCCGCGATAGCTCTACTTTAAGGAAACATCAAAACAAACATATGGGCATGGAAAGCGTTTATCAATGCAAAATATGCAGTAAGGGATATAAATCAAAAGTGACGTTAAAAATGCACGTCTCCGAAGCTCATTTAGATGTCGACGTAAAGAAAGTCCCGTGCGGGCAATGCGATAGGCTGTTTAAGACGGTCTGCCAAAGGAATGCCCATGTGAAACTGATACACAAGCGTGCGCTAGCGTGCACGTGCCCTGTGTGCGGTACCCGGCTGGCGAACAAGTACACCCTGAGCGAGCACATGCGCCGGCACATGGACGAGCGACCCTTCGCCTGCACGCACCCCGGCTGCGTACTGGCTTTTAAGAACAAGAGTTGTCTCCAAAAGCACTCAAAGATCCACCTGCCCCCGCCCTTTGAGTGCTCGCAATGCGGCCGTAAGTTCGTGCGCAAGACTCACGCGAGGCAGCACGAGATGAAAATGCACGCGGCACGCACGCGCTGCGTGGAGTGTGACTACTGCGGCGTCAAGTTCTTCTCCAAAACCTACCTGCTAAAGCACATACAGACGAAACACATTCACAAACACAAGTTCAAGTACACGTGCGATATTTGCGGATTGACAACGCATAATAAGCCGAGCATAGTGATGCACCTTAAATACGGCCACGTTAATGACGATGATCTTCAATGCAAGCTATGCGATAACAAGGTTGTATACAAGAAACACGCTTACCTGAAATTGCATTATTGGAAAACCCACAACGTTAAGTACAAGATAGATGCCAGAAGAACTGCTAGACCTAATAAGCAGGCTAGGCTGAACTTTGAATCTTGGGTTACTCAAGGTAAGCCGATGTCAGGTTCAGTGTATGATGAAATGTGCAGTAGTAGAAGGAGTTTCAAGTCGAGACTGAAATGGTGTCAGAAGCACCAGGAACAGATAAAGTTAGATATCCTGGCAACTCATCACACTAAAAACGACTTCCGTAGCTTTTGGAAAAGTACCAAGAAGATGAATGGTAGGCCTGGACTGCCTGCGAGTGTCGACAGCTTGAATGAGCCCAAAGACATTGCTAACCTCTTTAGGGAACACTTCTCTGTAATGCCTCAGGATGTGCCGGTGCTGGATGGGGGGATTGGAGTGGAGGGTGTCTTTCAAACCAGATTCCTTGCTAAGCAAGTTGAAGAAGTCATACGGAGCATGAAGAGGGGGAAGTCACCCGGCCACGACGGTCTCAGCATCGAGCACCTGCAGCATGCGGGGCCACATGTAGCTGGTGCACTAGCTATGCAGTGGTATGCTAGTCAAAGTAATGTTGTAAAATGGGGTAATGCTTTGTCAGATGATTATAAGTTGGAATGTGGGGTGCGCCAGGGAGGTTTAAGCTCTCCGAAGCTTTTCTGCATTTATGTGAATGCATTGATTGAAGAGCTCAGCAGTAAGCATGTCGGATGCTGGGTGCATGATGTCTGCTTCAATAACATCAGTTATGCtgatgacatggtgctgctgagCCCTTCAGTCAATGGTCTTTGTAAGCTTCTCAATATATGTGAGAAGTTTGCTGTAACTCATGGTCTGAAATATAATGTAGCTAAGAGTGAGTTTATGATTTTTAAGTCTGGCACCAAGTGTCCACCTTATGTCTCCACTGTGTCTCTCAACGGAACACAACTGAAGAGAGTGGTGGAAACGAATAGGAACGTACAAATAAAAGTGGAACCAATCGACGCGGAGTCTTCTGAGGATATTGAACTGTTAGATGTGCCAAAGATGGAACGAGCGTCTGAAGACGACAATGAATCTCTCGACTACTCCAAGCAAGTCCTGTCGGAGGATATAACAGCCCTAGTTCTGAGAGACCGTAATTTGGAGGGTAAAGAAGTGGACTTTGATGACTTCTACATAAAGCACATAATGGCTAAGCAGGAGGAGAAACCAGaagtgCCGAAATCATCTTTTGGCGTCAACAAAGAGCAAGACCTATACGTCAAACGAACAATCAAACACATTCTTATACGCGCTCAAAAAGTAGAGAAAGCTAAAGCAGAGcacaagaagaaaaaagaagaagagAGGCTAAGacagaaagaagaagaagaagaggcTCGGATAAGAGAAGAGGCGGAGAGGCAAGAGATTATAGAGCTGAGGAGAGTTAGGAAGTTGTATAACGAGAAAATGAGAGCGGCGGCGGAAAGGGAGAAGCGGAAGAAAGTTAATGCAATGGTCACAAAAAACGATATACAGCAATCGAATGTTGATATTGGAGTACGTAATGATGAAAACAGTGGTGATGAAGTAATTAACAATGACAGTGAAGATATAAACAGTGATAATGAATTGTCAGAAAGTGAAAGTGACAGTGATTTTGATAAACCTCTAATAAAACGTAAAAATAAATCAACGAAAGATTTAGATTATGAACTTGTTAAAGATGTTTGTAAAAAGAAAGCGAAGAAGATGGAGTTTAAGACACATCAGTGTTATGTTTGCTTCAAGCTTTACCAAACAAAAGAACAGCTAATAAATCATTGCCAAGAACATTTCGACATATGCAACGAAAGAATACTCGGAAAATGTCCTATATGCAATCAAGTTACTTTCAAAGTGGCCCAACACATGAGACGTTCCCACAAAATTAATATCAAAGTCCCTAAACTAAAGAATAGAAAGACTTCAGATGGATCTAAATACTGCTACGAAATCAACGGCGGCGAAATAGAAGTCATACCTAGCATAAAAGGATTAAATAAGAACGCTAGCATGGAAATAGACAAGAAGAGACGCGAGAACAAAGATAAAACCATAGCTAGAaagaaactagttaaaaaagGGACTGCCTGGATTGTAGAAAACGAGTATTTAGATATTAAATACGATGAGTTACCAAAACTCACTGATATAGAACTAACAAAGTGCAAAGTTACTGGGAACGATGTCGATAGGCTGGGACAAATCAGTCGTATCGcgaagaagaaaggtttgaaaATGATGTTTCCCTGCTTCGAATGTGACAAGGTGTGCCTCAACTTCAGTGGTATAAAGCTGCATAAGCGAAGGCATGAAGTTAATCCTAAACCTTTCGCGGCGCGGATAAAAAATGGAGCTAGAAGCGTCAAAAAGGAAAGTAAAATTAAGTTAGATAAAGCTAACAGAACAGCGCTTCCCAAGCCTATTAATACGAACCATAAATGTGATGAGAAGCTTAAGAAGTTCTTTGAAAGCAACATAAGGGGTGGGGGTATAGAGTTCTGGCAGTTCTTGAAGATATACAACAAAATGGGCCGTGAAAAAGTCAATGATTTCATAGATCTAGAGAACAGAAACGACTTTGGCAATCACTTGGATTATTACaaggatgatgataatgatgaaatgcTTGAAATGGCTCAAGAGattgataaatatattgatGCTAATAGCGAGAGCGATGAAggtgatgaaataaatgatgaagTGATTGCAGTAagtgatgaagatgatgatacaTAG
Protein Sequence: MANTKNKAKTKGPSKNGKKPKKKPFKCKECGKSFSDRYYLTSHELIHTDETFPCPLCPYVGNTKKYLARHNRQVHKERNQHKCTYCGKAFLHPNNLRNHIMVHTDEKPFRCSFCDYCCRDSSTLRKHQNKHMGMESVYQCKICSKGYKSKVTLKMHVSEAHLDVDVKKVPCGQCDRLFKTVCQRNAHVKLIHKRALACTCPVCGTRLANKYTLSEHMRRHMDERPFACTHPGCVLAFKNKSCLQKHSKIHLPPPFECSQCGRKFVRKTHARQHEMKMHAARTRCVECDYCGVKFFSKTYLLKHIQTKHIHKHKFKYTCDICGLTTHNKPSIVMHLKYGHVNDDDLQCKLCDNKVVYKKHAYLKLHYWKTHNVKYKIDARRTARPNKQARLNFESWVTQGKPMSGSVYDEMCSSRRSFKSRLKWCQKHQEQIKLDILATHHTKNDFRSFWKSTKKMNGRPGLPASVDSLNEPKDIANLFREHFSVMPQDVPVLDGGIGVEGVFQTRFLAKQVEEVIRSMKRGKSPGHDGLSIEHLQHAGPHVAGALAMQWYASQSNVVKWGNALSDDYKLECGVRQGGLSSPKLFCIYVNALIEELSSKHVGCWVHDVCFNNISYADDMVLLSPSVNGLCKLLNICEKFAVTHGLKYNVAKSEFMIFKSGTKCPPYVSTVSLNGTQLKRVVETNRNVQIKVEPIDAESSEDIELLDVPKMERASEDDNESLDYSKQVLSEDITALVLRDRNLEGKEVDFDDFYIKHIMAKQEEKPEVPKSSFGVNKEQDLYVKRTIKHILIRAQKVEKAKAEHKKKKEEERLRQKEEEEEARIREEAERQEIIELRRVRKLYNEKMRAAAEREKRKKVNAMVTKNDIQQSNVDIGVRNDENSGDEVINNDSEDINSDNELSESESDSDFDKPLIKRKNKSTKDLDYELVKDVCKKKAKKMEFKTHQCYVCFKLYQTKEQLINHCQEHFDICNERILGKCPICNQVTFKVAQHMRRSHKINIKVPKLKNRKTSDGSKYCYEINGGEIEVIPSIKGLNKNASMEIDKKRRENKDKTIARKKLVKKGTAWIVENEYLDIKYDELPKLTDIELTKCKVTGNDVDRLGQISRIAKKKGLKMMFPCFECDKVCLNFSGIKLHKRRHEVNPKPFAARIKNGARSVKKESKIKLDKANRTALPKPINTNHKCDEKLKKFFESNIRGGGIEFWQFLKIYNKMGREKVNDFIDLENRNDFGNHLDYYKDDDNDEMLEMAQEIDKYIDANSESDEGDEINDEVIAVSDEDDDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -