Basic Information

Insect: Eupithecia dodoneata
Gene Symbol: -
Assembly: GCA_947044255.1
Location: CAMRHC010000135.1:613819-615543[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.38 23 6.0 0.2 2 23 36 57 35 57 0.95

2 14 0.36 22 6.1 0.1 3 23 86 107 84 107 0.92

3 14 0.072 4.4 8.3 2.9 2 23 128 149 127 150 0.94

4 14 0.002 0.12 13.2 1.2 3 23 157 178 155 178 0.97

5 14 0.093 5.7 7.9 5.5 1 23 183 206 183 206 0.91

6 14 0.29 18 6.4 0.2 2 20 209 227 208 229 0.91

7 14 0.012 0.72 10.8 1.9 1 23 281 304 281 304 0.97

8 14 0.004 0.25 12.2 0.3 2 23 379 401 378 401 0.94

9 14 2.4e-05 0.0015 19.2 0.5 3 23 408 429 406 429 0.95

10 14 0.0041 0.25 12.2 5.9 2 23 434 456 433 456 0.95

11 14 0.028 1.7 9.6 0.3 1 23 461 484 461 484 0.97

12 14 0.00094 0.057 14.2 5.5 1 23 488 511 488 511 0.97

13 14 0.037 2.3 9.2 1.7 3 23 519 539 518 539 0.96

14 14 7.6e-06 0.00046 20.8 1.1 1 23 545 567 545 567 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.38	23	6.0	0.2	2	23	36	57	35	57	0.95
2	14	0.36	22	6.1	0.1	3	23	86	107	84	107	0.92
3	14	0.072	4.4	8.3	2.9	2	23	128	149	127	150	0.94
4	14	0.002	0.12	13.2	1.2	3	23	157	178	155	178	0.97
5	14	0.093	5.7	7.9	5.5	1	23	183	206	183	206	0.91
6	14	0.29	18	6.4	0.2	2	20	209	227	208	229	0.91
7	14	0.012	0.72	10.8	1.9	1	23	281	304	281	304	0.97
8	14	0.004	0.25	12.2	0.3	2	23	379	401	378	401	0.94
9	14	2.4e-05	0.0015	19.2	0.5	3	23	408	429	406	429	0.95
10	14	0.0041	0.25	12.2	5.9	2	23	434	456	433	456	0.95
11	14	0.028	1.7	9.6	0.3	1	23	461	484	461	484	0.97
12	14	0.00094	0.057	14.2	5.5	1	23	488	511	488	511	0.97
13	14	0.037	2.3	9.2	1.7	3	23	519	539	518	539	0.96
14	14	7.6e-06	0.00046	20.8	1.1	1	23	545	567	545	567	0.98

Sequence Information

Coding Sequence: ATGCCCGGAAAGGCCGACCGAATAACGTCCGAGCGACGGAGAAAAAACTTGAAAACGATACTCGATAATACAACCATCCTCCCCTTCAAATGGAGGGGGGTTATCGTTTGCTTCTACTGTAGCACACCAATTGACGATTACGTAGAGTTCAGAAAGCATACGAAAGCGCACGGTTCATGTAGCACCAAACACTTTGCGATGAAAGAACTGAAAGGCAAAGGCATCTCTGTTAATTTAGACGTATCGGAAATCGCGTGCGAAATTTGCGAGCAACAGTTCAAAAGCTTTGAAGTTATCGTGGAGCATTTAAGGAATGAGCATAGTCTTTTCTATGATAAGGAGGTTTACAGTGAAATCTTGGAATACAGGCTGCTGGATTTACGCTGCACTCAATGCGATAAGCAGTTGGAAACGTTTAGGCGACTTGTCAGTCATATTAACAAGCACCACCCTGTGAACAGATTCGGCTGTCACGATTGTGGACGTTTGTTTAATAAGAAACGAGATATTTTCGCGCATATTAATGTCTACCATCGATTAGGGGGATACATATGCAAGCATTGCAGTTTTAAGTGTAAGACTCGCGTCGAATTGCGGACGCATTCATCGCAGGCTCATCCGAAAACGTGCGGTTATTGCACGAGGGAGTTTCAATCTACCCTCGGTCTGAAACAGCATGTCATTAGGTGCAAAGTCAGGTTGCTCGCTCAGGGCGAGACTGAGTTAATTAACCAGAATGTAAGCACAGCGCGAACCCATGAGCAAATCGTTCGAATCAGGCAGAATATCCAATCCGTTTTAAACATGTCTACCGCTATCCCCTTTAAGTTCAGAGTCAAATTCAGCTGTTTCTACTGCTTCATCAAGTTTGACGACTACGAAGTCCTCAAACAGCACACTAAGACTGAACATACGGTTTGCGACATCAAATGTAAGTCCATGAAGTCTTGTAAaggcaagcggaccttcgtcaGGGTTGATATCGCCGAGTTAGCTTGTAAAATCTGCTCTGTACCAATGCCCGACCTGGAAACGTTCATTGACCACGCTCTTACCAACCATAACGCGGATTACGACAAAACCATCAGTCTCGACACTTGTTTTGAGCCTTACCGATTGCATAAAGGTAGCATCCCGTGCCTCGAATGCCCTAAAGTCTTCCGTTACTTGAATACAATGCTCAAACACTTCAATTCCGAGCACAGTAACAACAACGTAATTTGCGATTACTGTGGCCGCGGCTTTCGCAGCACGACCAACCTTAAAATGCACTTACAGAACAACCACACAGGTTCTTGTGAGTGCAAGACTTGCCACGCTAAGTTCAAAAACCACTCCGTTCTGATCCGGCACATGGCTAAGATCCACAATGAGAAGACGTTCAAATGCCCCAACTGTTCTGATATGTTCGAATCCGCGTACCAAAGGCAGATACATCTCATAAAAGTCCATGGGATCGGTCATAAGTGTGAATATTGTGGGAAGATGTTTACAAAGCATTCTTTTATGGATATCCACGTGAGACGGACGCATTTGAAAGAGAAGAATGTGGCTTGTTCGGTCTGCAACGATAAGTTCTTTGATAACCATTTGTTGAGGATGCATATGGTGAAACATGATGGAGAAAGGAAGTTCAAGTGTGAATTGTGCGGGAAGGCATTTTTGCGGCAGAAGAATTTGAGGACCCATTTGGATACGCATAAGAAGTACGGTTTTGTTCAGTGA
Protein Sequence: MPGKADRITSERRRKNLKTILDNTTILPFKWRGVIVCFYCSTPIDDYVEFRKHTKAHGSCSTKHFAMKELKGKGISVNLDVSEIACEICEQQFKSFEVIVEHLRNEHSLFYDKEVYSEILEYRLLDLRCTQCDKQLETFRRLVSHINKHHPVNRFGCHDCGRLFNKKRDIFAHINVYHRLGGYICKHCSFKCKTRVELRTHSSQAHPKTCGYCTREFQSTLGLKQHVIRCKVRLLAQGETELINQNVSTARTHEQIVRIRQNIQSVLNMSTAIPFKFRVKFSCFYCFIKFDDYEVLKQHTKTEHTVCDIKCKSMKSCKGKRTFVRVDIAELACKICSVPMPDLETFIDHALTNHNADYDKTISLDTCFEPYRLHKGSIPCLECPKVFRYLNTMLKHFNSEHSNNNVICDYCGRGFRSTTNLKMHLQNNHTGSCECKTCHAKFKNHSVLIRHMAKIHNEKTFKCPNCSDMFESAYQRQIHLIKVHGIGHKCEYCGKMFTKHSFMDIHVRRTHLKEKNVACSVCNDKFFDNHLLRMHMVKHDGERKFKCELCGKAFLRQKNLRTHLDTHKKYGFVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00702323;
90% Identity: iTF_00706352; iTF_00701411; iTF_00700427; iTF_00702323; iTF_00697689; iTF_00703323; iTF_00699516;
80% Identity: -