Edod011104.1
Basic Information
- Insect
- Eupithecia dodoneata
- Gene Symbol
- zfy1
- Assembly
- GCA_947044255.1
- Location
- CAMRHC010000058.1:1427237-1438879[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2.3 1.4e+02 3.5 0.4 2 23 6 27 5 27 0.96 2 14 0.0069 0.42 11.5 1.7 1 23 1005 1028 1005 1028 0.92 3 14 0.41 25 5.9 0.1 1 23 1108 1130 1108 1130 0.97 4 14 3.1e-06 0.00019 22.0 1.1 2 23 1133 1154 1132 1154 0.97 5 14 5.2e-05 0.0032 18.2 1.8 1 23 1160 1182 1160 1182 0.99 6 14 0.0031 0.19 12.6 4.0 1 23 1188 1210 1188 1211 0.96 7 14 0.0087 0.53 11.2 0.3 1 23 1221 1243 1221 1243 0.98 8 14 0.021 1.3 10.0 1.1 3 23 1250 1271 1249 1271 0.96 9 14 0.0036 0.22 12.4 0.4 2 23 1288 1308 1287 1308 0.97 10 14 0.00021 0.013 16.3 0.3 1 20 1314 1333 1314 1336 0.93 11 14 0.0013 0.08 13.8 0.5 1 23 1344 1366 1344 1366 0.98 12 14 0.006 0.37 11.7 7.2 1 23 1372 1394 1372 1394 0.98 13 14 8.3e-06 0.00051 20.7 1.1 1 23 1400 1424 1400 1424 0.97 14 14 0.0066 0.4 11.6 5.2 1 23 1430 1452 1430 1453 0.93
Sequence Information
- Coding Sequence
- ATGGAGTCTCCCGTGCAGTGCCCCGTGTGCACGCTGTTCCTGCACAATGGCATGACGCTGGAGTCGCATCTGGACACGCACCCTAAAGACCAGGTCATTAAGGCGCTGTGCAGCTTCACCAAGACGAGTCCCAGCTGCGCCAGCAGTCGCACGCCCACTCCTGTCCTCTCCGAGCGATCGTACCGCAGCCGGTCACGCACGCCAGTCACCGAGGACAGCGGAACCAATCCTTGGAATGGGAAGGAACACGATCGCTTCTGGGCAAGGACCCCCAGCGTCACCTCCATCAGAACTCCGAGTGGATCCAGCCGCGCACCCAGCAGGACTCCTAGCAGCTCTAGCCGTGCCCCCAGTAGAAACTGTAGAACCCCCAGATCACATTCATCAACCAATGCATCACGGATCTGTACTCCTGAAAGGATGGTTGACAATTTGGCATTTGAAGCAACAACAGCCAGTAATTCATCACTTAACTCATCTGGCCATTCCAAACCACCTTCAGTTATAAAAAGTGATAAATCACAACAAAGTCCTATGTACCAGTCTCCTGCTTCGCAAGATTATGATCCTCAGTACATAGATTACTCTGAACAGCTGGAGGATAGAGAGGTGAAGTATTCTCGAAGCGCAGAGTACAATGCTCTTAATGCTAATAACAATGAGCTCAATGCTAACAACATGTTTTCATTCAATGTGCCAATGCCTGGAACAGGGTCTAAGTTGCTGTCACTGCCTCCCCACATGATGCCACCTCGGAAGAGAAGTGAATCAGTGAAGGCTGCCCCTACGAAACATAATAACCTACTTAACcttgtgaaaaataatataagtggAATGCAGAAAGTACCACCTTACATGGCTAATCGCAGTCCATACCAGTTGGTTCCCAATGCAATCCCAACTTTTGTTCAAAATAATGTTCAAAACAGTATGATCCTGGCTAGCAGTCTGCCTAACAGTCAGTTAAAAATTGATGCTAAAAATGTGCCTCCAATAGTTCAAAACCACTTCAGTATGGCCTCTAGTGCCTTCACCCCTGGTACCACTGTGGTCACACAGAACTCCCAGTACTTTTACCAAGAAATGGTACAGAATATTGACCCTAAGGCATTTGTTCCTACAATGCCACCTGTATTTACGGGCCATGAGAATGTAACCAATGTTGCTCAAACTAGTTCAGAATGCACAAGGATGTATCAGAATGTGATGCTAATGGACCAGTATGGGAATACTTCTTGTATGTACACACCTCAGCAGGTGATGCCAAAGCCATGTGCACCTCAACTGTTCTCGGAAACTCGTACCAGAACAGTGAATACTTTGATGCAAAATTCAAGTCCAATAAAGAAAGATCCAAGTAAGACTTTGATAATTGAGGTGGGCCCTATACTGCCTCAGCAGAGAGCAAGCTCCAAGCCTTCTGCCCACACCACTGTGATAACACAGACCAGACCCTCGGTCCCCAACGTTCCTAAAATATGTCCCCCAAAGCCTGAAGCGCCTAGCATTTCCATTACTGAAAAGATTGATAAAACAGAAGCCCCGGGCACGACCAGGGGTCTTAAGATCCTCAGTAACATCAAAGTGGAGGTTCCAGTGCAGCATATCAAGAGTATGATAAACACTTTGATGGACCTGACGGGTTCCAACGACGCCGTGTACCCCGACCAGAGCCGGACGCCCGAGAATATACTGCCTGACCTCGAACTCGGGAAGCCGGCAGCCGGGGGCCTAAATCCACGCTCCTTTACCGAACTGAAGTTTGAAAACGCTACCTCAAGTAAAGACTTATCTAGTAAAACTAGCatagtagataataaattagaaacagACTACGGCGACAGCTGTCCCGTACCCGATTTGATTTGTAATGAGAAGCCTTCCATCTCGCCGTGCAGCGAGCTCTCCGAGAGCGGAGACAACTCCGTGGACCGCGCCTCCCCCGCCCCCGCGCTGCACTCCAGCGCAAGGAAAGACCCCGAGGTGGACTGCAGAAAGAAAGCCCCCTTGAAAATAAGACTGAACAACATTTTCGTGAGGAAGAACAAAAAGATTCTGCAAATAAAGAACGCGAGACCCACCTTCAGTCAGCCCACCTTCAGCCAGTGCGAAATAACTCCCGTCGCCTGCTCCTCGAAGAGCCTGGCCCCTGAGAACTTCGCAGTGATATCGCAATCCCCAAATCGCAGTGAAAAAGCTACGCTCAAGACCATTTCCATCGAGGAGATTAAAGAGAGTGTGGGGTATGCAGACATGGAGGTCGCTATGGAGGAGGTTAAAATGCCGCCGGCGCCGGAGAAAACGGAGATCGCGGTGAAAGAAGAGTTAAGCTTGAGCAACGACTGTGCCTTCAGCAACGAGGCCCCCGGACCGGCTCGAGGCCTCGGATCCCTCGACCCCCTGCGGCCCATATCCGTCAGCTACGGCAGCATGTCTTCCGCTGACTTTGACGACGAATCCAGCAACCGCGAGCTGCTAGACCTAGAGAGCACAAAGAACAAGCAGTTCGTCACGATGATGAACGATAACTACTTCGGTGACAACATTTACGCAGATTACTTCACGCCTGAAGAGCGCGGGGAGTCTTACGATGACAAAGGCCCTACGGTGTTCAAAGACGGCGGGAAAGAAGCGTTTTCGTGTAGCATTTGGGGGGAGCCGTCGAGTAAGGGGAACGATTTCGTTCTACCTAGCTTTATCCATGAAAGTTACAAGATAGCGGACAGTGGGGTGGAGTACGCGGACTTGGATGTTAGACGGGACTGCAAGGGGGACGTGCCTCCGCTGAACATCTGCGCTGATGAGCGGATGCCGCCTCGAGGGGAGCTCAGCGGACAGGAGAGCAATGGAGACATGGAATCCTCTTGGAATGGAATCTACCCTGAGGCAGTTTCGACGGAGGCCTACGATCTGATGGCTCGCGAGAGCTGGGAATCGGATGGGTCAGAGCTCGACACAGCAGAGAAAAGGGAAAATCTTGAGGAGCAGCTATCTTACCCCAAGCCGCGTAAACACTCGTGCCAGACATGTGGCTCCAAGTTCACGTCGCTGAAAGAGCTGCGCGCGCACAAGGCCAACGAGCACGTGTCCCAGATCGCACCGAAGCAGACCTACAGCCGCCTGCTGACGGCCAGGAGCATCAAGAAGGAGGAGAAACCGGATTTGAGTTGTGCGGCCAACATCCTAGCTATAGACTCGAAGGGCAGCATCACCTCAACTATCCTGGAAGTGTACGAGCAGGACCCCATAGACGAGGCTAAGCCGAAACTGAGTAATCTACGCTCCCTGCTCACCAAGGAGGTCAAACGGAAACGCAGGGACTTTGTCTGTCCTACCTGTAAAGTTAATCTGCTGACGGAGTCTGCTTTCACGGCGCATCTCAAGATCCACCCTCTGGAATGCCTGACGTGCGGCAAGTTCTTCACGCGGCGCGCCAATCTACAGCTGCACTTAAAGACTCATCTCGGCATCAAGGAGTTTAAATGTGACGTTTGCGAGAAGCGGTTCACGACCCGCCAGAAGCTCGGTGAGCACCAGAACACGCACACCGGCCGGGCGCCCTACAAGTGTACGCTGTGTGACGACACCTTCCGGCGGTACTCCAACATGATTCAGCACCGAGACCGACATCACTTCCACAAGCGAGTGAAAACCCGCGACTTCGTCTGCAACAGCTGCGGCGCCGTGTTCCAATCGCGCGCCAAATTCCTCTGGCACAAGGAGACCCACGCCGACAAGCCCAAAGCCTGCCTCTACTGCAGCGACAAGTTTGTGCACGCGGCTTCACTCACGCGCCACGTGAGACGCTCGCATAACGAGCTCTTCCAGAACACTAATAATAGGAATAAGAACGATAATGTTACGTGTCCGGTTTGTAAACAGGTATATCTCCGCTCGAACCTCCGCACGCACCTGCTAACGCACAGCGGCAAGCGTCCCTACGCCTGCGTCGTCTGCAACAAGGCATTCACCACCAAATGGAACCTCAAGCTCCACCGCTGGGTCCACATGAGCCGCTCAGCGAAGCCCTTCAAGTGCACCCTATGCAAGGGAGCCTTCATCCGACAAACAGAGTATATATCACACATGAACGCGCACAAATCCGTCCGCCCTTACACTTGCAACTACTGCGGATGCCAGTTTATTAGGAAATACAACTGCCAGAGGCATGTTAGAGAGCATGAAATGGCGAAGAAATTCGTCTGCAACGTACCAGAGTGCGGCAAGTCCTTCCATAGGAGTTACTACCTCTCCGAGCATATGAAAGTGCATAGTGGAGTGCGCCCGTTCTTGTGTGATATCTGTGAAAAGACTTCGAGCAATAAGTCGAACCATAACAAGCATATGAAGATACATCACGCGCGGGAGATGATCGCGGCGGAAGCCTAG
- Protein Sequence
- MESPVQCPVCTLFLHNGMTLESHLDTHPKDQVIKALCSFTKTSPSCASSRTPTPVLSERSYRSRSRTPVTEDSGTNPWNGKEHDRFWARTPSVTSIRTPSGSSRAPSRTPSSSSRAPSRNCRTPRSHSSTNASRICTPERMVDNLAFEATTASNSSLNSSGHSKPPSVIKSDKSQQSPMYQSPASQDYDPQYIDYSEQLEDREVKYSRSAEYNALNANNNELNANNMFSFNVPMPGTGSKLLSLPPHMMPPRKRSESVKAAPTKHNNLLNLVKNNISGMQKVPPYMANRSPYQLVPNAIPTFVQNNVQNSMILASSLPNSQLKIDAKNVPPIVQNHFSMASSAFTPGTTVVTQNSQYFYQEMVQNIDPKAFVPTMPPVFTGHENVTNVAQTSSECTRMYQNVMLMDQYGNTSCMYTPQQVMPKPCAPQLFSETRTRTVNTLMQNSSPIKKDPSKTLIIEVGPILPQQRASSKPSAHTTVITQTRPSVPNVPKICPPKPEAPSISITEKIDKTEAPGTTRGLKILSNIKVEVPVQHIKSMINTLMDLTGSNDAVYPDQSRTPENILPDLELGKPAAGGLNPRSFTELKFENATSSKDLSSKTSIVDNKLETDYGDSCPVPDLICNEKPSISPCSELSESGDNSVDRASPAPALHSSARKDPEVDCRKKAPLKIRLNNIFVRKNKKILQIKNARPTFSQPTFSQCEITPVACSSKSLAPENFAVISQSPNRSEKATLKTISIEEIKESVGYADMEVAMEEVKMPPAPEKTEIAVKEELSLSNDCAFSNEAPGPARGLGSLDPLRPISVSYGSMSSADFDDESSNRELLDLESTKNKQFVTMMNDNYFGDNIYADYFTPEERGESYDDKGPTVFKDGGKEAFSCSIWGEPSSKGNDFVLPSFIHESYKIADSGVEYADLDVRRDCKGDVPPLNICADERMPPRGELSGQESNGDMESSWNGIYPEAVSTEAYDLMARESWESDGSELDTAEKRENLEEQLSYPKPRKHSCQTCGSKFTSLKELRAHKANEHVSQIAPKQTYSRLLTARSIKKEEKPDLSCAANILAIDSKGSITSTILEVYEQDPIDEAKPKLSNLRSLLTKEVKRKRRDFVCPTCKVNLLTESAFTAHLKIHPLECLTCGKFFTRRANLQLHLKTHLGIKEFKCDVCEKRFTTRQKLGEHQNTHTGRAPYKCTLCDDTFRRYSNMIQHRDRHHFHKRVKTRDFVCNSCGAVFQSRAKFLWHKETHADKPKACLYCSDKFVHAASLTRHVRRSHNELFQNTNNRNKNDNVTCPVCKQVYLRSNLRTHLLTHSGKRPYACVVCNKAFTTKWNLKLHRWVHMSRSAKPFKCTLCKGAFIRQTEYISHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKFVCNVPECGKSFHRSYYLSEHMKVHSGVRPFLCDICEKTSSNKSNHNKHMKIHHAREMIAAEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00701360;
- 90% Identity
- iTF_00700392;
- 80% Identity
- -