Basic Information

Insect: Eupithecia dodoneata
Gene Symbol: Sall1
Assembly: GCA_947044255.1
Location: CAMRHC010000080.1:1021672-1023447[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.11 6.6 7.7 3.5 2 23 184 205 183 205 0.97

2 12 1.7e-05 0.0011 19.7 3.1 1 23 211 233 211 233 0.97

3 12 0.003 0.18 12.6 0.1 3 23 266 286 265 286 0.98

4 12 6.4e-05 0.0039 17.9 1.6 1 23 292 315 292 315 0.96

5 12 2.9e-07 1.8e-05 25.2 3.4 1 23 323 345 323 345 0.99

6 12 3.3e-06 0.0002 21.9 0.5 1 23 351 373 351 373 0.98

7 12 8.8e-07 5.4e-05 23.7 0.3 1 23 379 401 379 401 0.97

8 12 0.00057 0.035 14.9 0.6 1 23 407 429 407 429 0.96

9 12 4.9e-06 0.0003 21.4 0.1 1 23 435 458 435 458 0.97

10 12 0.19 11 7.0 2.7 1 21 488 508 488 511 0.89

11 12 0.04 2.5 9.1 0.4 1 23 517 542 517 542 0.92

12 12 0.005 0.31 11.9 2.4 1 23 548 571 548 571 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.11	6.6	7.7	3.5	2	23	184	205	183	205	0.97
2	12	1.7e-05	0.0011	19.7	3.1	1	23	211	233	211	233	0.97
3	12	0.003	0.18	12.6	0.1	3	23	266	286	265	286	0.98
4	12	6.4e-05	0.0039	17.9	1.6	1	23	292	315	292	315	0.96
5	12	2.9e-07	1.8e-05	25.2	3.4	1	23	323	345	323	345	0.99
6	12	3.3e-06	0.0002	21.9	0.5	1	23	351	373	351	373	0.98
7	12	8.8e-07	5.4e-05	23.7	0.3	1	23	379	401	379	401	0.97
8	12	0.00057	0.035	14.9	0.6	1	23	407	429	407	429	0.96
9	12	4.9e-06	0.0003	21.4	0.1	1	23	435	458	435	458	0.97
10	12	0.19	11	7.0	2.7	1	21	488	508	488	511	0.89
11	12	0.04	2.5	9.1	0.4	1	23	517	542	517	542	0.92
12	12	0.005	0.31	11.9	2.4	1	23	548	571	548	571	0.98

Sequence Information

Coding Sequence: ATGGAGTCCAAAATATGTCGCGTATGCCTCGATAGGACGGCAACAATATCTCTGTTCGAAACAGTGGACGATGTCCAGTACCGAGACAAGGTGAAGAAGTGTGTAGGAGTGAGTATCGAGGAGGGCGACGGTCTGCCCGACGCCATCTGCGACAGCTGCGCCTTCGAGCTTGCCGCCAGCTATGAGTTCGCGCTCAAATGCGAGGCCTCGGATCGCGCGCTGCGCTGTCTCGACCTCCTGCACTCCTCTGGACTCAAGGACGAACTCATCAAATCTGAGGTCAAACTAGAAGAACCGGTCTATGCCCCGTTATACACCTCTAATGATATTACACAAGAATTAAACAGTCATAATCTTGATTACATTAACAATCATGATAATTACGATTATTTCGACAGCTTTTCCGATAATAAAGACAACTTAGATGTAGCTCCTAAAATCCAAAATAATGATGGACCTAAGAAAGACAGGATCTTGCAAGAAAAGTATAAGAAACCTCTACCAAACCATCTACGTAAGATTAAACACAGAGTTTACTCGGGTCCTATTCAGTGCATGACCTGCGGAAGAATACTCAAGTGTCACTCTGCTTACGAGCAGCACATGCGCACGCACACCAAAGAGAAACCATTCATTTGTGATCTCTGCTACAAAAGCTTCAGATCCAAGAGTAGTATGAAGAGGCATATCTACAAGCATTATGGAATTGATGAAATTGAACTCCGAAAACTAAGACCCTTGCCCGACTGGGATGGAAGAAAGAAAGGGAATAAGAGCTGTACAACTCCTGTTCTGTGCGTTGTTTGTGGCCTTAAGCTGAACTCTGTCTCTGCCTTGGAGATTCACATGAGGAAGCACACAGGAGATAAACCCTTCTCTTGTACAGAATGCAGCAAAAGCTACTCTCTCAAGGGGTCTCTTAGAAGACATGAAGAAACATTTCActctaaattaaaacaattaaaatatgtttgcGAGCACTGTGGAAAGAATTTCAGCCACAAGagtaacataataatacatttacgAACACACACAGGAGAGAAGCCTTATTCATGCCCGTACTGTGAGGAGAAGTTTGCTCAAATATCATCACTGATCCGTCACAAGCGCTCCCACACCGGGGAACGGCCATTCAAGTGTGAGACTTGCGGGAAGGGCTTCTCGGACCGGAGCCTGGTACGCAGGCACATGGCGGCTCACAGCGACGCACGCAACTTCGTCTGCCACATATGCAGCAAGGGCCTGAAGACGAGACAAGCTCTGAAAGTCCACGTGGAACTTCACAACAGCTCCGGCAAGTACGCGTGCGCGGACTGCGGCGTCACATTCACGGTGAAGGGCAACCTCACCTCGCACGTGCGCCGCCAGCACTCTGCGCGCTCGGGGGCCTGCGCGCTCTGTGACAAGACGGTCCCCGACCTGGCGGCGCACGTGCGCTGGCACAACGGGGACAAACCACACGTCTGTAAGATCTGCAGCCAGGGGTTCATGTCTAAGCGGGGCATGTCGCACCACATCGGGTTCAAGCACCGCGACTCGGCTAAGTTCAAGTGCAAGACGGGGCAGTGCGACCGCGCCTTCCCTACGATCTCGATGCTCGAGTTCCACGTACTGAAGACTCACCTGGACCGCACGCCCTACGTCTGCTCGCACTGCGCGCGCGGATTCCTGCGCCCCTGCGATCTCTCGCGGCATCTGCGCGTCAACCACATGGACAATACGCAGATCAAGTCGCAGTTCATCAAGACTGTGCAGATCTCTGATCCGGCGTAA
Protein Sequence: MESKICRVCLDRTATISLFETVDDVQYRDKVKKCVGVSIEEGDGLPDAICDSCAFELAASYEFALKCEASDRALRCLDLLHSSGLKDELIKSEVKLEEPVYAPLYTSNDITQELNSHNLDYINNHDNYDYFDSFSDNKDNLDVAPKIQNNDGPKKDRILQEKYKKPLPNHLRKIKHRVYSGPIQCMTCGRILKCHSAYEQHMRTHTKEKPFICDLCYKSFRSKSSMKRHIYKHYGIDEIELRKLRPLPDWDGRKKGNKSCTTPVLCVVCGLKLNSVSALEIHMRKHTGDKPFSCTECSKSYSLKGSLRRHEETFHSKLKQLKYVCEHCGKNFSHKSNIIIHLRTHTGEKPYSCPYCEEKFAQISSLIRHKRSHTGERPFKCETCGKGFSDRSLVRRHMAAHSDARNFVCHICSKGLKTRQALKVHVELHNSSGKYACADCGVTFTVKGNLTSHVRRQHSARSGACALCDKTVPDLAAHVRWHNGDKPHVCKICSQGFMSKRGMSHHIGFKHRDSAKFKCKTGQCDRAFPTISMLEFHVLKTHLDRTPYVCSHCARGFLRPCDLSRHLRVNHMDNTQIKSQFIKTVQISDPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00703252;
90% Identity: iTF_00701311;
80% Identity: -