Basic Information

Insect: Eupithecia dodoneata
Gene Symbol: -
Assembly: GCA_947044255.1
Location: CAMRHC010000135.1:1569046-1582236[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.5e-05 0.0021 18.7 1.2 1 23 301 323 301 323 0.98

2 18 0.0025 0.16 12.8 0.4 2 23 348 370 347 370 0.95

3 18 0.086 5.3 8.0 1.7 2 23 393 415 392 415 0.94

4 18 7.2e-05 0.0044 17.7 1.5 1 23 419 441 419 441 0.98

5 18 0.0013 0.08 13.8 1.8 1 23 446 468 446 468 0.97

6 18 4.5e-05 0.0028 18.4 0.2 1 23 505 528 505 528 0.95

7 18 0.0036 0.22 12.4 2.1 1 23 534 558 534 558 0.96

8 18 0.00018 0.011 16.4 0.9 1 20 563 582 563 585 0.95

9 18 2.7e-05 0.0017 19.1 1.8 1 23 632 655 632 655 0.97

10 18 0.0086 0.53 11.2 0.9 2 23 678 700 677 700 0.93

11 18 0.024 1.4 9.8 1.9 2 23 723 745 722 745 0.91

12 18 0.00012 0.0072 17.1 0.4 1 23 749 771 749 771 0.96

13 18 0.074 4.6 8.2 0.7 1 23 776 799 776 799 0.93

14 18 6.8 4.1e+02 2.1 2.3 2 22 807 827 807 829 0.84

15 18 2.3e-06 0.00014 22.4 0.3 1 23 836 859 836 859 0.97

16 18 0.00017 0.011 16.5 0.1 1 23 865 889 865 889 0.99

17 18 0.00014 0.0084 16.8 0.6 1 23 895 917 895 917 0.97

18 18 4e-05 0.0025 18.5 0.2 1 23 923 946 923 946 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.5e-05	0.0021	18.7	1.2	1	23	301	323	301	323	0.98
2	18	0.0025	0.16	12.8	0.4	2	23	348	370	347	370	0.95
3	18	0.086	5.3	8.0	1.7	2	23	393	415	392	415	0.94
4	18	7.2e-05	0.0044	17.7	1.5	1	23	419	441	419	441	0.98
5	18	0.0013	0.08	13.8	1.8	1	23	446	468	446	468	0.97
6	18	4.5e-05	0.0028	18.4	0.2	1	23	505	528	505	528	0.95
7	18	0.0036	0.22	12.4	2.1	1	23	534	558	534	558	0.96
8	18	0.00018	0.011	16.4	0.9	1	20	563	582	563	585	0.95
9	18	2.7e-05	0.0017	19.1	1.8	1	23	632	655	632	655	0.97
10	18	0.0086	0.53	11.2	0.9	2	23	678	700	677	700	0.93
11	18	0.024	1.4	9.8	1.9	2	23	723	745	722	745	0.91
12	18	0.00012	0.0072	17.1	0.4	1	23	749	771	749	771	0.96
13	18	0.074	4.6	8.2	0.7	1	23	776	799	776	799	0.93
14	18	6.8	4.1e+02	2.1	2.3	2	22	807	827	807	829	0.84
15	18	2.3e-06	0.00014	22.4	0.3	1	23	836	859	836	859	0.97
16	18	0.00017	0.011	16.5	0.1	1	23	865	889	865	889	0.99
17	18	0.00014	0.0084	16.8	0.6	1	23	895	917	895	917	0.97
18	18	4e-05	0.0025	18.5	0.2	1	23	923	946	923	946	0.95

Sequence Information

Coding Sequence: atggcAGTCGAAAAACTTGAAATAGAGACTTATTTTGGGAAGTGTAAGTGTTGTCTCAAATTTGGCTATCTGAGACCTATGTGGGACGAAAATGAGGACGAGCATGAAGTGTACGGGAAGATGCTCACgcaatgtttttctattccgTGGACTATAGAAGTCTCCGAGGAAGACGATCAGATCTGCGAGGATTGCATTTGGAAGCTACAAGAGGCCAACAAGTTCAAACAACAGATTCTGAAGTGCCGTTCTGTATGTACTCAAGACCAACAAATAGaAGTTGTAttagaagaaataaaatcagAACCAGAAGAGGCGTATGACGTTGAATACCTGGACGAAGATCTTTTGCACAAGAATGTTGAAGACACGGGTAACAATGAACAGAATGGAGACTATGATGCCGATTATCTTGAAGATATGGAAACACTTGATGATGACAATGAAAATCATGATGGTGGATCGGATAAATCTGATTTGGATGAGGACGACGATGATGAAGAATATAAAGAATCGGAGGCGCCTAGATCTACGTCAAGAAAGCGAACGGCGCCGGGACGGGGCGCTAGGGCTGACGCGGCCACACCCAAATCCAAATGGCCTAAGAAACTGCCTTTGGAGGAACGGTGGAAGACTTATAGGCAGTATACTGacgACGACATGAAGTTGGCTATCGACGAGGTGATGAACAAGACAATGAGCCAGAGACAAGCAGCGCTGAAGTTCAACGTGCCCGTGAAGACTCTGAGCGCCAAGATAAGAGCTTTTAAAAATTCGGAGGAAGCAAGCCCATCAGACGAAAACGAAGCCACGGCGATCATACAGAAACATAGAGAGAACTTACAATCAGTACTCGCTTACTCCAACGCGACGCCTATACGAGGCTTTTGGGGGATGGGCTACGTCTGCTCGATATGCCCCCATCAATTCGCCAAGCCATCTGAACTGAAAACACACACGCAAAAACATGGAGACCTCTGCCAACTATTCAAAATCAACCACGTCAGAGGTCATATCGCTAGACTAGACGTAACCAACCTGATTTGCAATCTTTGCAACACGAAATTTGTGAAGCTGCAATCTCTTATGGAGCATCTTAAGATGATACACGGAAAACCTATGCATTTCGATATAGATAACCATATGGTGCCTTTCAAATTCGATTCAAATTTGCTACAGTGCGCGGATTGTCCAGACACGTTTAAATACTGCAAGAAACTGTCCGAACATATGGCCAACAAACATTATAGGAACTATATCTGCAAAGATTGCAATAAGGGTTTCTTTAATCTTTCCCATCTGGCTGGGCATAGAGAAACGCATCAATCTGGCGAATTTCGCTGCGGCAAATGTGGGAAAGTCTTCATAACACTACGGAAGAAGTCCAAACATGAACGCTTGCATGTCGTTCGGGGGAAAAACTTCAAATGCAAATTCTGTGAACTCTGGTTCTTTAATGCAACGCAGAGATATAACCATGAATTAAGAGTGCATGCGAACGATAAGCTTGAATTCGACTGCAGTTATTGCGACAAGACTTATGCAGTGCTGAAAAATCTTCGTGTACATATCAACGAAGTCCATTTGGAGACGAAGAAACATGAATGTCCTGTGAAAACTTGCGAGAAATCTTTCTATCTTAAGCGAACGCTCAAAGCGCATGTTAAACAGCACGATTTCAAACGTTTTCAATGCCCAAGATGCTTTAAGATGTTCAAATCAAGTGTTACGCTCAGAGATCATATGCCATTACATACGAGTGAGCAGCCAGATGGGGATATCGGAAGTGAGATGACGCTAAAAGAGCATGTTGTAATACTTACGAAACATAGAGATAATCTGTTCAGTGTGCTGGCTTATTCAAACGCTACGCCAATCGGAAGCAACTGTGGCTTTGCTTGCTGCTACTGCCCGAAGCAGTACCGAGACGCGGCAGAACTTAAAAAACACACACGCACAGAGCACAAACCGGAAAAATACCAGATCAAACAGGTTCGATCGCATTGCGTTAAGCTGGACATAACAGAACTGATATGCACTATTTGCCGTAAGAAAATAACAGATCTAGAATCCTTGATGAAACATTTAAAGTTTAAACACGGGAAGCTTATGCATTTTGATATCAAAAACCATCTAATACCGTTCAGATTTGATGGCGGCGAATTGAAATGTATCAAATGCGGACGTACATTCGAATTCTTCAAACATCTATCGGAGCATATGAACGATGCGCACTTTAGGAACTACGAATGCGATAAGTGCACGCGAGGATTCGTGAACAAATCTACGTTGGCAACGCACGCGTTGCAACACAACACGGGAAATTTCCCGTGTGACTTCTGCGCGAAAGTTTTCACAACTAAGATCAGGCGATACGAACACGTGCGTGTATCACATAAGCTTAAAAGCAAGGGACGAAAGTGTTTCTTCTGCGATGAAAGATTCATAGATTCAACAAGAAAGCTAAAACACGAGGTGGAACACCACGGTGTCCCGCAAAAGTTATACGACTGCAAAGCTTGCGGGAAATCCTTCCCCGTGAAACGGAACTTACAGCGACATATACAGATGATACATTTGCTTCATCGTCCGTATAAATGTGAAGTCGAAGGCTGTGAAAGAGCATTCTATATGAACTCTCAGTTAGTAACTCATATATTGACGCATGGTCATGAAAAGCCCTATATATGTGATCAATGCCCTAAGTCATACAAGTCTAAGAATGCGCTGGTTATTCATAAGTACACGCATTATGACAAAAGAGAGTTTCAGTGCAATATATGTCAGAAGCGTTTCACTGTGGTAGAGAATTTGGAGACACATTTGGCGAATATACACAATGTTTTGTCGTACAGCGATTCCTGA
Protein Sequence: MAVEKLEIETYFGKCKCCLKFGYLRPMWDENEDEHEVYGKMLTQCFSIPWTIEVSEEDDQICEDCIWKLQEANKFKQQILKCRSVCTQDQQIEVVLEEIKSEPEEAYDVEYLDEDLLHKNVEDTGNNEQNGDYDADYLEDMETLDDDNENHDGGSDKSDLDEDDDDEEYKESEAPRSTSRKRTAPGRGARADAATPKSKWPKKLPLEERWKTYRQYTDDDMKLAIDEVMNKTMSQRQAALKFNVPVKTLSAKIRAFKNSEEASPSDENEATAIIQKHRENLQSVLAYSNATPIRGFWGMGYVCSICPHQFAKPSELKTHTQKHGDLCQLFKINHVRGHIARLDVTNLICNLCNTKFVKLQSLMEHLKMIHGKPMHFDIDNHMVPFKFDSNLLQCADCPDTFKYCKKLSEHMANKHYRNYICKDCNKGFFNLSHLAGHRETHQSGEFRCGKCGKVFITLRKKSKHERLHVVRGKNFKCKFCELWFFNATQRYNHELRVHANDKLEFDCSYCDKTYAVLKNLRVHINEVHLETKKHECPVKTCEKSFYLKRTLKAHVKQHDFKRFQCPRCFKMFKSSVTLRDHMPLHTSEQPDGDIGSEMTLKEHVVILTKHRDNLFSVLAYSNATPIGSNCGFACCYCPKQYRDAAELKKHTRTEHKPEKYQIKQVRSHCVKLDITELICTICRKKITDLESLMKHLKFKHGKLMHFDIKNHLIPFRFDGGELKCIKCGRTFEFFKHLSEHMNDAHFRNYECDKCTRGFVNKSTLATHALQHNTGNFPCDFCAKVFTTKIRRYEHVRVSHKLKSKGRKCFFCDERFIDSTRKLKHEVEHHGVPQKLYDCKACGKSFPVKRNLQRHIQMIHLLHRPYKCEVEGCERAFYMNSQLVTHILTHGHEKPYICDQCPKSYKSKNALVIHKYTHYDKREFQCNICQKRFTVVENLETHLANIHNVLSYSDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00698204;
90% Identity: iTF_00698204;
80% Identity: iTF_00698204;