Basic Information

Insect: Eupithecia dodoneata
Gene Symbol: -
Assembly: GCA_947044255.1
Location: CAMRHC010000135.1:1678502-1685270[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.03 1.8 9.5 0.1 1 23 52 74 52 74 0.92

2 25 0.062 3.8 8.5 0.0 2 23 99 121 98 121 0.93

3 25 0.031 1.9 9.4 0.7 2 23 144 165 143 165 0.97

4 25 0.0012 0.074 13.9 0.1 1 23 169 191 169 191 0.95

5 25 0.0012 0.076 13.8 0.3 1 23 196 219 196 219 0.92

6 25 0.0015 0.091 13.6 1.8 1 23 225 248 225 248 0.96

7 25 0.47 29 5.7 0.7 1 12 254 265 254 267 0.90

8 25 0.46 28 5.8 0.0 1 23 306 329 306 329 0.83

9 25 9.7e-05 0.0059 17.3 2.9 1 23 396 418 396 418 0.99

10 25 4.9e-07 3e-05 24.5 0.2 2 23 423 444 422 444 0.97

11 25 7e-05 0.0043 17.8 1.0 1 23 452 475 452 475 0.96

12 25 0.00046 0.028 15.2 8.5 1 23 481 504 481 504 0.96

13 25 0.049 3 8.8 0.7 1 23 510 533 510 533 0.95

14 25 0.036 2.2 9.2 3.8 1 20 539 558 539 561 0.95

15 25 8.7e-07 5.3e-05 23.8 1.6 1 23 567 589 567 589 0.98

16 25 0.065 4 8.4 2.5 1 23 648 670 648 671 0.93

17 25 2.2 1.4e+02 3.6 0.1 2 23 694 716 694 716 0.92

18 25 0.0058 0.35 11.7 3.8 1 23 738 760 738 760 0.97

19 25 0.00026 0.016 16.0 0.9 1 23 764 786 764 786 0.98

20 25 0.0017 0.1 13.4 0.1 1 23 791 814 791 814 0.96

21 25 0.00036 0.022 15.5 1.8 1 23 820 843 820 843 0.96

22 25 0.00063 0.038 14.8 0.9 1 23 850 873 850 873 0.96

23 25 0.0011 0.065 14.1 1.5 1 23 879 901 879 901 0.95

24 25 2.3e-06 0.00014 22.4 0.8 1 23 907 929 907 929 0.99

25 25 4.9e-07 3e-05 24.6 2.6 1 23 935 957 935 958 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.03	1.8	9.5	0.1	1	23	52	74	52	74	0.92
2	25	0.062	3.8	8.5	0.0	2	23	99	121	98	121	0.93
3	25	0.031	1.9	9.4	0.7	2	23	144	165	143	165	0.97
4	25	0.0012	0.074	13.9	0.1	1	23	169	191	169	191	0.95
5	25	0.0012	0.076	13.8	0.3	1	23	196	219	196	219	0.92
6	25	0.0015	0.091	13.6	1.8	1	23	225	248	225	248	0.96
7	25	0.47	29	5.7	0.7	1	12	254	265	254	267	0.90
8	25	0.46	28	5.8	0.0	1	23	306	329	306	329	0.83
9	25	9.7e-05	0.0059	17.3	2.9	1	23	396	418	396	418	0.99
10	25	4.9e-07	3e-05	24.5	0.2	2	23	423	444	422	444	0.97
11	25	7e-05	0.0043	17.8	1.0	1	23	452	475	452	475	0.96
12	25	0.00046	0.028	15.2	8.5	1	23	481	504	481	504	0.96
13	25	0.049	3	8.8	0.7	1	23	510	533	510	533	0.95
14	25	0.036	2.2	9.2	3.8	1	20	539	558	539	561	0.95
15	25	8.7e-07	5.3e-05	23.8	1.6	1	23	567	589	567	589	0.98
16	25	0.065	4	8.4	2.5	1	23	648	670	648	671	0.93
17	25	2.2	1.4e+02	3.6	0.1	2	23	694	716	694	716	0.92
18	25	0.0058	0.35	11.7	3.8	1	23	738	760	738	760	0.97
19	25	0.00026	0.016	16.0	0.9	1	23	764	786	764	786	0.98
20	25	0.0017	0.1	13.4	0.1	1	23	791	814	791	814	0.96
21	25	0.00036	0.022	15.5	1.8	1	23	820	843	820	843	0.96
22	25	0.00063	0.038	14.8	0.9	1	23	850	873	850	873	0.96
23	25	0.0011	0.065	14.1	1.5	1	23	879	901	879	901	0.95
24	25	2.3e-06	0.00014	22.4	0.8	1	23	907	929	907	929	0.99
25	25	4.9e-07	3e-05	24.6	2.6	1	23	935	957	935	958	0.96

Sequence Information

Coding Sequence: aTGCAACAGACTGATACAACAATTGCAAGGCAGTCGATAGGCGCTCGCCAGATCGTGCTGACGAAGAAAAGGGCATTGATGGAAGACAAGGCAAACGCGGGAATGATTTTAAAGTACTCGAATGCGGTCGTCTTTAGATGGCAAAGAGGGAAGTTCATGTGTGCACTTTGTCCTGAAAATTTCGCCAATTTTACAGATTTACGAATCCACTCTGCTGAGCACAATAAGTTAGATGTTATCGAGACTTATAAGACTCGTCTCATCTTTCCATTGAACTTGGATATATCAAGTCTTGTTTGCGAAATTTGCAATGCATCGATAAAGGATATAGGTGATCTTAAGAGTCATCTTTCAAACGACCACAGTATATCTATAGATGGAAATTACGCAGATGGTGTTATACCATATCGTTTAGTCGGAAAGGGTTTGCGATGTGTGATCTGcgaatctagttttgacaaattCATGACTCTATTTATTCACATGAACAGACATTATCCTAGCTACGTCTGTGATTTCTGCGGGAAAGGTTTCTCCGCCGCGAACAAGCTACGATCTCATAATGCTATACACAATCCCGGAATGTTTGAATGCAAAGAATGCGACGCAGTGTTCACAAACAGAGCGGCTAAGAATAGACATGTTAGTGGGAAACACCGTCCTAAAGAACGATATAAATGCCCGATTTGCGATGAACATTTTAATTCATACTACACGCGGGTGCAGCACCTCAAACTTGTCCACGGGCAAACTTCAGAATACCGCTGTTCCTATTGCCCTACTGTGTTTGACACCGgAGACCCTGTCCGGAGCATTGGTTGGATACCGAGGCGAAAATACTATGACCACAGAGACAATGCAGCGCTTATTCTAGAATATTCCAACATTTGTCCATTTAGGTGGCACCGAGGCATGTTTGTCTGCGGGATCTGCCCACAAAAATTTGCCAAGTTCGAACCTGTCAGAGAACATGTTGCCTTAGAGCATCCCAACAAAATTGAGGCACTCAAGCCTATAAAAAAGTACTTCCTAAAATGCGATATAACAGACCTTAAATGTATGATATGTCTCGCAAGCATAAAAGACATCAACGATTTTGTCGAGCATTTAAAAGATGATCACGGTAAGCCGCTTGTCAACGACTGTAGTATGGGTATCATACCCTATCGATTAAACACCGTGTTGTACAAATGTACGCACTGCCCTGAAACCTTTAACTTCTTCAACTCTTTGAACAGTCACATCAACATCCACTACCCGAATTCTGTATGTCCGATATGCGGAAAGGCTTTCTCTAATAACGGTAAAATGAACTCGCATATGCAAACACACGGCATCGGCACCAAGGGGGTATTCAAATGCTCCAAATGTGACGAGGTTTTCACTAGCCCATACGATAAACAAAAACACGTTTTATCCTCACACTCTAAACTGAAAAGGTACAGATGCCCACATTGCCACGAAAGCTTCAAAAGATACTCGCACAGGTTGAAGCACATGAACGAATATCACGACACTAAAATTGATTTCCCCTGTAGCCTTTGCCCTGCTGTGTTTACTATGCACAATATGAGAACTAAGCACATCCAACAAGTTCATATCAAGGAGAAGCGTTATAGTTGCACTGAATGCTCGCACCAGTTCGTGACCATCTCTATGCTTCGAAGACACAAGATCTGTCACACCGGCGAGAGGAAATACCACTGCGAAGTTTGCAATAAATCTTACGCGCGTCCTTACACGCTAAAAGAACATATGCGAATACACACTAATGATCgaAAGAAAACTCAAGAGATTTTGGTAAAACTCGAAGTGGAATCCGAATTAGAAAATAACTCCAGAATCAAAGAGGGCGCTGAACGACGCGCCGCCTTCCGGCATAACATATGCACTGTTCTGGAGACCAGCACCGCTTACCCTTTCAAATACAGAAAAGGAGCGTATCTCTGTTACTTCTGCAAATTAACGTTCATAGAACCAGAGAAACTGCGAGAGCACAACAAAACACACCACGCTGATACTAAACATCTAATAAAACCGCGCAAATATGAACCGCTCAAGATAGACTTCGCTGAGGCGTCGTGCAAAGACTGCGACGTCCTCATCACCGACTATGCTGCATACAAAGACCATTTGACCGTAGAACACGGAAAAGTCATCGACTGCACATGGGGAGATAGTATCTTACCCTACAAACTCAGCAAAGAGGAACATTCTTGCCAAATATGCGGGAAAACCTACGAAATGTTTCTTAGCCTCCACAAGCACATGAATGAGCACTACGAGCATTACATCTGCGAGACTTGCGGCAAGCGTTTCGCGACTTCGCAAAGGATGGTCAACCATTCAAGAACTCATGAAAGAGGGGAATTTCCTTGTAAAAGATGTGACGAAACTTTCTCATCGTATGCGGCGGTTTACGCGCACATAGCCAAAGTACATAGACTAAACAAGCGGTACAAATGCCCTATATGCGACGAGAAATTTGTGTCATACAAGCATAGACTCAAGCATTTAAACCTAGTGCACGGGGAAAAGACAGCCATCTTCCCATGCCCCGTCTGTCCAAAAGTGTTCGACCTGTGCAGTCAACGCACAGCCCATATCAGATTCCGTCATCTTCAAGAGCGAAATCATATATGCTCAGTTTGTGGAATGAAATTCTTCACTAACTACGAACTTCAGGAGCATTCAATCAAGCATGGCGGCGAGAGAATATACAAATGCGATGTTTGCAAGAAAGCTTACGCGAGGCTGAAGACTTTGAGGGAACATATGAGGATTCATAATAATGATAGGAGATTCGTCTGTCCTGTCTGTGGGCAGTCGTTTATACAGAACTGCAGCTTGAAACAGCACATGCGGGTTCATCATCCGACGAATATGAAGAATATATTTTAG
Protein Sequence: MQQTDTTIARQSIGARQIVLTKKRALMEDKANAGMILKYSNAVVFRWQRGKFMCALCPENFANFTDLRIHSAEHNKLDVIETYKTRLIFPLNLDISSLVCEICNASIKDIGDLKSHLSNDHSISIDGNYADGVIPYRLVGKGLRCVICESSFDKFMTLFIHMNRHYPSYVCDFCGKGFSAANKLRSHNAIHNPGMFECKECDAVFTNRAAKNRHVSGKHRPKERYKCPICDEHFNSYYTRVQHLKLVHGQTSEYRCSYCPTVFDTGDPVRSIGWIPRRKYYDHRDNAALILEYSNICPFRWHRGMFVCGICPQKFAKFEPVREHVALEHPNKIEALKPIKKYFLKCDITDLKCMICLASIKDINDFVEHLKDDHGKPLVNDCSMGIIPYRLNTVLYKCTHCPETFNFFNSLNSHINIHYPNSVCPICGKAFSNNGKMNSHMQTHGIGTKGVFKCSKCDEVFTSPYDKQKHVLSSHSKLKRYRCPHCHESFKRYSHRLKHMNEYHDTKIDFPCSLCPAVFTMHNMRTKHIQQVHIKEKRYSCTECSHQFVTISMLRRHKICHTGERKYHCEVCNKSYARPYTLKEHMRIHTNDRKKTQEILVKLEVESELENNSRIKEGAERRAAFRHNICTVLETSTAYPFKYRKGAYLCYFCKLTFIEPEKLREHNKTHHADTKHLIKPRKYEPLKIDFAEASCKDCDVLITDYAAYKDHLTVEHGKVIDCTWGDSILPYKLSKEEHSCQICGKTYEMFLSLHKHMNEHYEHYICETCGKRFATSQRMVNHSRTHERGEFPCKRCDETFSSYAAVYAHIAKVHRLNKRYKCPICDEKFVSYKHRLKHLNLVHGEKTAIFPCPVCPKVFDLCSQRTAHIRFRHLQERNHICSVCGMKFFTNYELQEHSIKHGGERIYKCDVCKKAYARLKTLREHMRIHNNDRRFVCPVCGQSFIQNCSLKQHMRVHHPTNMKNIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -