Basic Information

Gene Symbol
Kdm5
Assembly
GCA_947044255.1
Location
CAMRHC010000079.1:1007122-1031130[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5e-24 1e-20 74.2 0.0 2 89 101 184 100 184 0.94
2 2 3 6.2e+03 -2.0 0.0 47 71 1296 1320 1284 1336 0.65

Sequence Information

Coding Sequence
ATGGGAAAATGTGATGAAACAAATGTGGAAGTGAATATGGGGGACTCTGCGTCCCCCATGAAGCCAGACAACTTCACGTTCACGCCGCCCCCCGAGGCGCCGGTGTTCGAGCCCACGGCCGAGGAGTTCCTGGACCCTTTGGCGTACATCAGCAAGATACGGCCTATCGCTGAGAAATCCGGGATTTGCAAGATAAAGCCACCAGCGCACTGGCAGCCCCCATTCGCAGTGGACGTAGACCGGCTCCGCTTCACGCCGCGCATCCAGCGGCTCAACGAGCTTGAGGCCATAACCCGCGTGAAGCTGAACTTCCTGGACCAGATCATCAAGTTCTGGGAGCTGCAGGGCAATGCCCTCAAGATCCCCACCGTGGAGCGCAAGCCGCTGGACCTGTACGCGCTGCACAAGATTGTCAGGGAAGCAGGTGGGTTCGAGGTATGTTCGGGGGAGCGCAAGTGGTCCAAGATCGCGCGGCGCATGGGCCACCCGCAGGGCAAGGGCATCGGCTCCATCCTCAAGAACCACTACGAACGGATCCTCTACCCCTACGACGTGTTCAAGAGCAACGGCGCAGTCGCTGATCACAAGGAGACTAAGATAGAAGTGAAACGCGAGTCGACGCCGGAGCAGGCgggtgccgccgccgccgggccgCGCGCGCGTTCCGCCTCCAAGTGCGGCACGtcccccgcgcccgcgcccgctccCTCTCCCGCGCGCCGCTACAAGGCCGAGCCCGAGGCGGCCGAGGGCTCGCACACCGAGGGAGCCCTGCCGCCCAACAGCGACAAGGGCATGAAGACGCCAGTCAAGGAGGAGAGCCCCGAGACTAATAGACGCAGTCCTCGCGAGAACAAGTGGATGTCCTCGACGGGCAGCTGTGGGTCGCGCGGGCGCGTGACGCGCAGCGCGCGCCTGCGTGAGCACCGCATGTCCAACATGACGGTGTCCGTgacgcccgcgccgccgcccgcagcCGCGCCCAGACCAGACAACAACAACGACCCGCTGGCTAAGTACATGTGTCACGTGTGCGGGCGCGGCGACGTGGAGGAGAACATGTTGCTGTGCGACGGCTGCGACGACTCGTACCACACCTTCTGCCTGCTGCCGCCGCTCGCCGTCGTGCCCAAGGGCGACTGGCGCTGCCCAGTCTGTCTCGCAACAGAGGTGTCAAAACCAGCTGAAGCGTTTGGCTTCGAGCAAGCCTCGCGCGAGTACACGCTTCAGCAGTTTGGAGAAATGGCCGACCAGTTCAAATCCGATTACTTCAACATGCCCGTACACATGGTTCCGACGTCGACGGTAGAGAAGGAGTTCTGGCGCATCGTGTCGTCCTTAGACGAAGACGTCACGGTGGAGTACGGAGCCGACCTGCACTCTATGGATCACGGATCTGGGTTCCCTACGAAGTCGAGCGCGCACCTGTACCCCGGCGAGCAGCAGTACGCAGACTCCAGCTGGAATCTGAACAACCTGCCCGTGCTGGAGGGCTCCGTGCTCGGACACATCAACGCAGACATATCCGGGATGAAGATCCCCTGGCTGTACGTGGGGATGTGTTTCGCGACCTTCTGCTGGCACAACGAGGACCACTGGAGCTACTCCATCAACTACCTGCACTGGGGGGAGGCCAAGACTTGGTACGGAGTGCCGAGCTCTAAGGCGGAGCAGTTCGAGGCAGCCATGAAGGCGGAGGCGCCGGAGCTGTTCCAGCTGCAGCCGGACCTGCTGCACCAGCTCGTCACCATTATGAACCCCAACGTCCTCATGAAGGCAGGGGTTCCCGTCTACAGACTAGACCAGCACGCGGGCGAGTTCGTGGTGACATTCCCGCGCGCCTACCACGCCGGCTTCAACCAGGGGTACAACTTCGCGGAGGCCGTCAACTTCACGCCGGCCGACTGGTTGAAGATGGGTCGCGAGTGCGTGGTGCACTACAGCACGCTGCGGCGCTACTGCGTGTTCTCGCACGACGAGCTGGTCTGCAAGATGGCGCTGGAGGCGGACGCGCTCACGCTGACCGTGGCGCTCGCCGCCTACCGCGACATGCGCGCCATGCTGCACAACGAGCGCCGCCTGCGCAAGAACCTACTGCACTGGGGCGTGACGGAGGCAGAGCGCGAAGCCTTCGAGCTGCTCCCGGACGACGCGCGCCAGTGCGCGGCGTGCAAGACCACGTGCTTCCTGTCGTGCGTCACGTGCGCCTGCACCACGCACGTGGCCTGCCTGCGCCACGCCGCACTGCTCTGCGCCTGCGCACCGGCCAAGCACACGCTCAGATACCGGTATACCCTAGACGAGCTGCCGGCCATGCTCAGCAAGCTGAAAGCCAAGTCGGAGCAGTTCCGCTCGTGGGCTGAAGCCGTGCAGAACGCGCTGGACCCCGACACGCCCAAGACCTGCGACCTGGACGGGCTGCGGCACCACCTGCACAAGGCGCACCAGCTCAAGATGCAAAAAACGGAACTAGTCCGAGCGTTAGAAACGGCAATCGAAGACGCGGAGAAATGTGCGTCCGTGATCCAACAGCTGGACCTGAACAAGATGCGCACGCGCACGCGGCACCACGACCCCAAGTACCGGCTGTCCATACACGAGCTCACGCTGTTCGCCGCCGAGATTGACAGCCTGGCCTGCGTGCTGCCGGAAGGGTCTGCCGTGAAGGAGGTGCTGCGTCAGACGTCAGAGTTCGAGACGCGCGCCAGCGAGCTCCTCCGGCATGATCTCGAGAAGATCGAGACCTCGTACGTCAGGGATGTGGAAGAgACGGTGGAGCTGGGCGGGCGGCTGTGCATCGTGCTGCCGCAGCTGGAGGCGCTGTCGGCGCGGCTGGCGCAGGCGCGCTGGCTGGAGGAGGCGCAGCAGCACCGCGAGGCCTGCTCCACGCTCACGCCGCCCGTGCTGGCCGCGCTGCTGGCGCGCGCTGCCACGCTGCCGCAGCACAGGGCCATCGAGCACGAGCGCGCGCTGCTCTACAGGCTGCAAGTGGAAGTAGAAGAATGGGAGAAGAAGGCACAAGCGGTCCTCATCGACACATCCAAGTCTCCCCTGGACGAAGACAACCCTCAGTACAGCACGCTGGCCTCGCTGAGCGCGCTGCTGGCGGAGGGGACGGACATTGAGGCTGCACTGCCCTCCTACCACGCGCTGCAGTCCGCCATCGCGCACGCCAAGGACTGGCTGCACAAGGTGGAAGAGATGCAGTCGTCGGAGCTGTACCCGTACATCCACTCGGTGGCGGCGCTGGTGCGGCGCGCGGCCTCGCTCCCGCTCGCGCTGCTCGAGAAGGAGCAGCTCACCGCGGCGCTGCACTCCGCCGAGGAGTGGCGCCGCGGGGCCGCCGACATGTTCCTCAAGAGCAACTGGAAAGGCGGTCTCTTGGAAGCGCTATCGCCGCGCTCGTCgttcggcggcggcgcggcggggcggcggcgcggcgcgtcgtgcggcgggggcgcgggcggcgggggcgCGCTGGCGGACAAGTTCACGGAGGAGAGCACGCCGCACGAGATCGTCACCGCCTTCAAGCACGCGGAGGCCAGCGAGCTGCAGGCCATCAAGGAACTCAGGGCGCGCAACACGCGCAAGGACgtgcgcgcgccgcccgccaccACGGTCACCTTCTGCATCTGCCAGAAGCGTCAGTACGGAGTCATGACGCAGTGTGAACTCTGCAAGGACTGGTTCCACGCGTCGTGCATCGCGAACGCGCGCGACGACCGCGAGGAGTCCCCGGACCGCGAGGGGTTCCCGAGCGCGGAGTCCAAGTTCCTCTGTCCGGACTGCGTGCGCACCAAGCGGCCCCGGCTCGACCGCATTCTGGCCTTGTTGGTGTGGCTGCAGAAGCTGCCGGTGAGGCTGCCGGAAGGCGAGGCACTGCAGTGCGTGACGGAGCGCGCCATGGCGTGGCAGGACCTGGCGCGCCACGCGCTCTCCACGCAGCACCACGAGACACAGGCGAGCCGGGAGAAGGCGGACAAACTCAACTCCGAGCTGAAGAAGGCGACCGCGCGCCTGCACGACCAGCACCACTCCAGGTCGTCAGCCAGCGTGGAGCACGCGTACAGCGCGTCCCCGCGGGGCGGGGGTGGCGGTGAGGGGGCGCGGGTGTCGCCCGCCGCGCTCGGCAAGCTGGAGGAGCTGATGCTGGAGGGGGACCTGCTGGAGGTGGTGCTGGAGGAGCAGCGGCTCGTATGGGACGCGGTGTGCGGCGCACGCGGCGCAGCgggccggcgcggcgcgcgcgtgCTGGACGCCGGCCGCGCTAAGCGACGCACGCCGCACACGCACAGGCACGCCAAGCGCACGCGCACGATACACCCACCAGGCGGCGCGGCCCCGCCCCTCCCCTCCACCTCgaaggcgggcggcgcgcggcgcggcgccacCACCAACTACCTCAACAGGAAACAGGGCGTGTCCTCCGCGTCCGGGCTCATGATGCGCAAGCACTACATGGCGCGCCAGGAGCGCCGCAAGCGAGGCGTCACCACCAGGCATAGAGgcgggcgcgggcgcgtgGTGtcacgcggcggcggcggcggcgcggcgccggcggccCCGGACTCCTCCTCCTCGTCCGCCTCCTCCGCCGACGACGAGGAGGACTGCGCCGCCGACAACTGTCTGCGACCCACCGGCAAGGTGGACTGGGTGCAGTGCGACGGCGGCTGCGACGAGTGGTTCCACATGCACTGCGTGGGCGTGGCGCGCCACGCGCTGCGGGACAACGACGACTACGTGTGCGGCTCCTGTGCGCAGCGCCCCGCGCGCACGCGTAGCCCGCCGCATGCGTAG
Protein Sequence
MGKCDETNVEVNMGDSASPMKPDNFTFTPPPEAPVFEPTAEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGNALKIPTVERKPLDLYALHKIVREAGGFEVCSGERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDVFKSNGAVADHKETKIEVKRESTPEQAGAAAAGPRARSASKCGTSPAPAPAPSPARRYKAEPEAAEGSHTEGALPPNSDKGMKTPVKEESPETNRRSPRENKWMSSTGSCGSRGRVTRSARLREHRMSNMTVSVTPAPPPAAAPRPDNNNDPLAKYMCHVCGRGDVEENMLLCDGCDDSYHTFCLLPPLAVVPKGDWRCPVCLATEVSKPAEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEKEFWRIVSSLDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYADSSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRLDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECVVHYSTLRRYCVFSHDELVCKMALEADALTLTVALAAYRDMRAMLHNERRLRKNLLHWGVTEAEREAFELLPDDARQCAACKTTCFLSCVTCACTTHVACLRHAALLCACAPAKHTLRYRYTLDELPAMLSKLKAKSEQFRSWAEAVQNALDPDTPKTCDLDGLRHHLHKAHQLKMQKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLSIHELTLFAAEIDSLACVLPEGSAVKEVLRQTSEFETRASELLRHDLEKIETSYVRDVEETVELGGRLCIVLPQLEALSARLAQARWLEEAQQHREACSTLTPPVLAALLARAATLPQHRAIEHERALLYRLQVEVEEWEKKAQAVLIDTSKSPLDEDNPQYSTLASLSALLAEGTDIEAALPSYHALQSAIAHAKDWLHKVEEMQSSELYPYIHSVAALVRRAASLPLALLEKEQLTAALHSAEEWRRGAADMFLKSNWKGGLLEALSPRSSFGGGAAGRRRGASCGGGAGGGGALADKFTEESTPHEIVTAFKHAEASELQAIKELRARNTRKDVRAPPATTVTFCICQKRQYGVMTQCELCKDWFHASCIANARDDREESPDREGFPSAESKFLCPDCVRTKRPRLDRILALLVWLQKLPVRLPEGEALQCVTERAMAWQDLARHALSTQHHETQASREKADKLNSELKKATARLHDQHHSRSSASVEHAYSASPRGGGGGEGARVSPAALGKLEELMLEGDLLEVVLEEQRLVWDAVCGARGAAGRRGARVLDAGRAKRRTPHTHRHAKRTRTIHPPGGAAPPLPSTSKAGGARRGATTNYLNRKQGVSSASGLMMRKHYMARQERRKRGVTTRHRGGRGRVVSRGGGGGAAPAAPDSSSSSASSADDEEDCAADNCLRPTGKVDWVQCDGGCDEWFHMHCVGVARHALRDNDDYVCGSCAQRPARTRSPPHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00632545;
90% Identity
iTF_00699881;
80% Identity
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