Ecen026104.1
Basic Information
- Insect
- Eupithecia centaureata
- Gene Symbol
- -
- Assembly
- GCA_944548335.1
- Location
- CALYMU010001383.1:44390-59775[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 8.2 6.4e+02 1.9 0.3 1 9 212 220 212 234 0.67 2 9 0.59 46 5.5 1.6 1 19 288 306 288 309 0.93 3 9 0.022 1.7 10.0 0.6 1 23 881 903 881 903 0.96 4 9 0.074 5.8 8.4 1.4 3 23 910 930 909 930 0.96 5 9 0.00047 0.037 15.3 1.4 2 23 1036 1057 1035 1057 0.94 6 9 0.086 6.8 8.1 2.4 1 23 1072 1094 1072 1094 0.97 7 9 1.7e-06 0.00013 22.9 2.6 1 23 1100 1122 1100 1122 0.98 8 9 0.00014 0.011 16.9 0.9 2 23 1128 1149 1127 1149 0.95 9 9 0.0004 0.032 15.5 0.3 3 23 1215 1236 1214 1236 0.97
Sequence Information
- Coding Sequence
- ATGTCAGTAAGCAGGAAGAGAAGCAGAAAATCTAAATTAGAAGTTCGCAACGACGACGACTGTGAATTCGAGGTTGTTTGTGACGACACAAACAACGACGACGTGCAGCATTTGCAGTCGTTGGAGGCCTCATGCACAGAACCAGTCTCAAGACGTTCAAAAACAGTCGTATATTATCCAGAAAATCTACTCATCCCTGACCATGACTACTGCTGGCCATTTACATCCTCAACTGGACGCTCAAGAACTAGTATTGGCATAACAAAAACACCCTCCTATAATGCAAATCAGGGAGTTAAGATAGAAGCTGAGCAGTACGAAGTACCAAAGGTGGATTCAAAGGCCAGTGTATTGAAAAACATGGACATTAAcaaatataaatgcaaaaaagATGGCAAGATACGGATGTTCAAATATGTCCCACATAAACTTTTTGAAGAATCAAAACAAATTGCTGAGACTTCCAACAATAAAGCTGATAAAATACTTGATATTGAGATGAGGAATCTATGGGGTAACGTATTGTATACTCCCAATGATGTGACTCTACAAGATAAAAAGCTTCAGGTAGCTATACACAACTGGCAGTCGTGGTTTAACGGATCTCGATTAGTTCGAGATTCACCACTGTTCTACCAGTGCCACATCTGTGAGTTAGCGTGGTGGAGACTGCAACCGTTTCGagaacacatcaaaatccatgACAGCGTTAAGCTTATCATATCCATGAAAGAGCATCTACATGAATCATTCATCATTGCGAGCTATGAGATCGTTAACAGGCTTATATATATACCGATAGACGGTAACTGCTATCGCTGTGGTGAAAACGTGGAGTTCCATAAAAACAATTCCCTTGCATACGCCTGCAATCGATGCTCAAAGTGTGCATACACATGCTCAGGCTTAAGAGATCACGAAGCCATATGCTTATATGTCAATTTGGTTATGTACAACATCTCTATAGATCGCCAATGCTCAATATGCAAGCATGTGTTAAACTCAATAGAATTAAGGGATGAACACATGATAGAAGCTCATTCCGTACGATCAGATATCCCCGTGCAGAATGTGTGTAAAACATGTACGAACTGCAGTGAGAAATATTTTACGTATACAATGCACAATTGCTCTAGAAGTGGGAGGAATTGCTGCTGTGACTACTGTTGCAGAAAGTTTGCATCAAATAAACTCTCTGTGAATCATATAACGGGTTCACATAATCGGTCAACTCAATGTAGGATTTGTAACAAGCTATTAAAAGCTAAATGCCAAGAGATGGAACATTTAGTCAACAATCATCCCTCAAGCTATAAGTTCGTGTTTAAGTGTACAATTTGCTCAGAGGAGAATTTGTTTATGGATGAAGAGTCTGTTGCTTTGCATCGGCTTTTATGGCATCAGAGAAAGCCGGATAAAAGACGAGCGTTTTTAGAAAAGaTGCTGGTGCCTATAACTTGTCTGGATGAGGAAAACGTAGAAGAAGCCGTTCTTCTACCTGGCACTGGAGCTAAGAAACCAGCGCCAAAGAAAAAAGGAATCAAAAAGGGCGATGACCCTAGTCTACCCTCAAAATCCTTCTCAGTCTTGACAGCTGACGTCAACGTGACAGTAGACGAAATAGACGTCAAGAACGAGCCAATGGAAGCGGACGACAACGAAGAGGTTGATTATGAAGAGATGCTTCTTAAAATGTTCAATCAATCGCCCAAAAGACCAGTATCTAAGACAGTCAATAGTGACAGTGACAAAACAAAAGAAGCTGGTATATGTGAACCTGAAAAGGCAACAGAATTTGATTACAGCAGTGTCAAAATCAAAGCGGAACCAATAGATGATATTGATATTGTAGATAATCCAGTTGACGAAGTTCAAATTAAGACAGAACCGGTTGATCCAACTGAGTTTGATGACGAAGTTATGGAAAGATGCTACGATTTCGGTAATGCTACTGTTAAGATCGAAAGGAATGCTGAACCGGATGATTTTGTCATCAATGATACAACAGACAGCAAAGATCATACAGACAGCAAAGATCATACAGACATCAAAGATCATACAGACAACAAAGATCATACAGACATCAAAGATCACACAGACATCAAAGACCATACAGACATCAAAGATCTAACAGACATCAAAGATTCAATCGACAGCAAAGATCATACAGACATCAAAGATCATGCAGACATCACAGATTCAACTGACAACAAAGATCATACAGACATCAATGATCATACAGACATCAAAGATCATACTGACATCAATGATCATACAGACATCAAAGATTCAATTGACAGCCAAGATAATAAAGACAGCATTGCTGAAACAGATAATGAAGATGACATAATAATCAAAGAGGAGTTTGATGATGCTATCACCATCAAAACGGAAGATGATTCTTCATCGTCTGAACCTTTTCACGATTTAATCACAGAGCTAGATATGTTTAGAGAAGACAAAGAAACTGAAGCGGAAAAAATCAATTATGAATATTCGATTGAAGTAATCGATTCGAAAGGAAaactgaaacaaaagaaaatgtatACTTGTAGAAAATGCGGGTATACAGCGCATCATAAGAAATATAAACTTCATATAGACACTAAATGCCTTATTTCTCCGGGAATCAACTGTAGTTATCCTTGCTCCTTATGTGGACTCACTTTTGTTATGTTTAAGAACTATATATTACATTTTGAGAAGCACGGATATGAACTGAGGAGTTGTTTTATATGCGGAGCAAGTTTTGAAGTGGAATTTAAGTTCCTATCGCATATGCATCGGCATGTTAAAAGCAGTTTTGTTGGTGTACATATGTTGGATAAGAGTGGGGAGGAAATTAAAAGGTCGCAGAAGCGTGTCACATGCATGAATTGTAAACAAACTGTAGAACAAGACTCGATGTTCTCACACTGGGAAACGAAACACCTTAAGCTGAAGGAAATCAAAAGCGAAGAGGAGGAATCGACATTAGTGATCAAAGACGAGCCAATGCCAGAGTTGACCGTGGATTGCGAACGCGTCACTATGAACAACAAGGAACTGGAGCCAGCTATGCTTAAACTGGCGATAACTCACCTCCAAATGGACTCCAACGATAAGGAGTGTTGTATCTGCTACCGTGCGTTCGCTCGCCGCTACGATCTGAAAAGACACATCGTGGAGCATTTACTCATGGACGCGCATATGAAGAAGATCAAATACAGGGATTTTCGGTGTCAGATATGTTCGGAAGGCTTCCCCCACCAGGAGCGATACAAGTTCCACATGCGAGGTCACGGGAACATGCCTATATTCATGTGCGAACTATGCAACAAGACGTTTAGCGACTCCAGCAACTTCGCCAAGCACAAGAAGACTCACAACGTCCGGTGCCTGGTCTGTGACATTTGCAAGAAGAAGTTCCATTCGAAGGTGGCTCTCGAGAAGCACATCATGGACCATTATACCAAACCACCAACGATTTGCCCGCATTGCTCGAAGACTTTCCACTCTAAAGCAAGCTGCAAGAAACATTGTTACCAAGTTCATCAGAAACATAAATACAAATGTATCCTGTGCGATGTCAATTTCTCCTCGATCCAAAACAAATGGGACCACGATTGGGTGGTACACCGAGAACGCAAACACGTGGCCGACTGTCCCATCTGCTTCAAGTCATTCCGCAAGCTCTCCGACGTCAAGATCCACGCGCGATCCGAACACAACGCACATATAAACGCACTCAAGCACGACAAGGATGAAgggaagaagaaaaaaatacacgtgTTCAAAGTGCGGTTTGACGAGAACGAGACTTTGGTGGTGTGCGAGTGA
- Protein Sequence
- MSVSRKRSRKSKLEVRNDDDCEFEVVCDDTNNDDVQHLQSLEASCTEPVSRRSKTVVYYPENLLIPDHDYCWPFTSSTGRSRTSIGITKTPSYNANQGVKIEAEQYEVPKVDSKASVLKNMDINKYKCKKDGKIRMFKYVPHKLFEESKQIAETSNNKADKILDIEMRNLWGNVLYTPNDVTLQDKKLQVAIHNWQSWFNGSRLVRDSPLFYQCHICELAWWRLQPFREHIKIHDSVKLIISMKEHLHESFIIASYEIVNRLIYIPIDGNCYRCGENVEFHKNNSLAYACNRCSKCAYTCSGLRDHEAICLYVNLVMYNISIDRQCSICKHVLNSIELRDEHMIEAHSVRSDIPVQNVCKTCTNCSEKYFTYTMHNCSRSGRNCCCDYCCRKFASNKLSVNHITGSHNRSTQCRICNKLLKAKCQEMEHLVNNHPSSYKFVFKCTICSEENLFMDEESVALHRLLWHQRKPDKRRAFLEKMLVPITCLDEENVEEAVLLPGTGAKKPAPKKKGIKKGDDPSLPSKSFSVLTADVNVTVDEIDVKNEPMEADDNEEVDYEEMLLKMFNQSPKRPVSKTVNSDSDKTKEAGICEPEKATEFDYSSVKIKAEPIDDIDIVDNPVDEVQIKTEPVDPTEFDDEVMERCYDFGNATVKIERNAEPDDFVINDTTDSKDHTDSKDHTDIKDHTDNKDHTDIKDHTDIKDHTDIKDLTDIKDSIDSKDHTDIKDHADITDSTDNKDHTDINDHTDIKDHTDINDHTDIKDSIDSQDNKDSIAETDNEDDIIIKEEFDDAITIKTEDDSSSSEPFHDLITELDMFREDKETEAEKINYEYSIEVIDSKGKLKQKKMYTCRKCGYTAHHKKYKLHIDTKCLISPGINCSYPCSLCGLTFVMFKNYILHFEKHGYELRSCFICGASFEVEFKFLSHMHRHVKSSFVGVHMLDKSGEEIKRSQKRVTCMNCKQTVEQDSMFSHWETKHLKLKEIKSEEEESTLVIKDEPMPELTVDCERVTMNNKELEPAMLKLAITHLQMDSNDKECCICYRAFARRYDLKRHIVEHLLMDAHMKKIKYRDFRCQICSEGFPHQERYKFHMRGHGNMPIFMCELCNKTFSDSSNFAKHKKTHNVRCLVCDICKKKFHSKVALEKHIMDHYTKPPTICPHCSKTFHSKASCKKHCYQVHQKHKYKCILCDVNFSSIQNKWDHDWVVHRERKHVADCPICFKSFRKLSDVKIHARSEHNAHINALKHDKDEGKKKKIHVFKVRFDENETLVVCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -