Basic Information

Insect: Eupithecia centaureata
Gene Symbol: -
Assembly: GCA_944548335.1
Location: CALYMU010001383.1:106285-122614[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.22 17 6.9 0.8 1 23 426 448 426 448 0.97

2 10 0.031 2.5 9.5 0.8 3 23 457 477 455 477 0.94

3 10 1.8 1.4e+02 4.0 0.1 1 14 481 494 481 498 0.82

4 10 0.0033 0.26 12.6 4.8 2 23 508 530 507 530 0.96

5 10 5.3e-06 0.00042 21.4 1.8 1 23 537 559 537 559 0.99

6 10 6e-05 0.0047 18.1 1.3 1 23 564 586 564 586 0.98

7 10 0.006 0.47 11.8 0.7 1 21 592 612 592 617 0.94

8 10 0.0021 0.17 13.2 0.6 1 23 622 645 622 645 0.95

9 10 0.0032 0.25 12.6 0.2 3 23 653 673 651 673 0.95

10 10 0.022 1.7 10.0 0.8 3 21 684 702 683 703 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.22	17	6.9	0.8	1	23	426	448	426	448	0.97
2	10	0.031	2.5	9.5	0.8	3	23	457	477	455	477	0.94
3	10	1.8	1.4e+02	4.0	0.1	1	14	481	494	481	498	0.82
4	10	0.0033	0.26	12.6	4.8	2	23	508	530	507	530	0.96
5	10	5.3e-06	0.00042	21.4	1.8	1	23	537	559	537	559	0.99
6	10	6e-05	0.0047	18.1	1.3	1	23	564	586	564	586	0.98
7	10	0.006	0.47	11.8	0.7	1	21	592	612	592	617	0.94
8	10	0.0021	0.17	13.2	0.6	1	23	622	645	622	645	0.95
9	10	0.0032	0.25	12.6	0.2	3	23	653	673	651	673	0.95
10	10	0.022	1.7	10.0	0.8	3	21	684	702	683	703	0.95

Sequence Information

Coding Sequence: ATGTCTTCTTTCCTATGTTTCGTATGCCATAGCACAGTAAATGCTGACACAAATGAGGATACCCGTGATAAATACCGTGAAGTTATTGGAATGCATctgTGTCCTGATTCTCACCTCTGCTTCATTTGCTGCCATTTCCTGAACAAAATGTGGCTTTTCAAGTCTATTTGTCTGAAGAGAAGTCTGGAGTATCCAGTCTTGTTCAGTGAAAAAGGCACAATAAACCTGCAAAGAAGCGACACCCAAGTGAGTACTCTCTGCCCGGAAGATCCATGCCTACAGCATCTTAACTCAAAATATCATTTCTACAACACTATAGAAAACTCACCTCAGTTCGAAGAAAACAGATATGTTCAACTACACGAAGAAATGCACTTTGGACTACTTCCCAATAATGTAGAAGTCCAAACAGATGATCTATTCGAACATTTTAACGATAACCTTCTTAAATCTACGGTAGAACAGTTTAATAACGAATTTCTAGGCATTAAAGAGACTAGAAAAGAAGTTGATGAGTTTATATTTGCCAATGATAACATAGAATCTCCAttagaaaacataaataaaattgaactaGGTAATTTAGAAGAAATATCAGAAGTTAATATCACATTGACTGATTTAAATGTTAGGAATTTTGATTGTAAAGAATTTAGGAATGATTATGTTGATAGAAATGATCTTAGAAGTTGTTTTGTTGAAAAACAACAATACATGAGAAATAATCATTTTGTTGAAAAATGTAATCAAATTGTTGGAACCAGTGATCATTTTGTTGGTTTGGTAGACAGATCACATGACTGTTGTGTGAGAAACAGCTTTGAAGTGAAATTAGacacaaataatgtttttgttgAGAGATCTGATGATTATGTTGTTAGAAATGATGATTTCATCCAAGAACGGAATCAATatgttgaaaatgaaaatatcatCAATGAAAACAATGAATATCAAGAAGCACCTTACTCCaatgatgaaataaatgataaaaatgatGAAACAAAAGATAATGTTGACGCACAACATattaaattagaaaataataacaatagcgATACTAATGCTGAAACTGACGATGATAATGAAGATTCAACTGAAAACAATGTACATGATGATAATGACAAATCATtagaaaataatgataaaaacaatgaatatatagaaatagaaataccaAAGAAGAATGTATTCATCAAATTGACGCTCAGCCAAGAAGATCAGAAAATAGAGCTAGAAGAGAGtagaaaaagtaaaaagtacatAGATGCTGTATATAAGTGCTATAGTTGCGCTATTGGATTCTTGTTCAAGGATTCTTATCAAGCACATATGATGAGACATGAAGAGTCCAACGGTGAACATCTCTGTCAAATTTGCTCCCTCCGTTTCGCAAACCCGGCTGTACTAAGAGTCCACCACGCTAACCACTTGGTAAGGTATCAATGTACGATCTGTGAGCAAATACTAAGAAGTAAGCAGAGATTGTCCCATCCATGCCAGAGACAAACTAACCAGGTGCCTTGCCATCTCTGTGGAAAAGTATtccaGAGTCAAAGCCATCACCAACAGCATCTAAAGCGCGCCCACGAGAGCAGTAATCGAACCTACACCTGCAACGTATGTGGCAAGCGATGCAAGAACCAGGCCGCCGTGAGAACGCACATGTTAACGCATATAACAAGAAAATTCACATGCGACCTCTGTCCGTCAACCTTCAGTAGTCCATACACGCTCAAGCAGCATTCTAAGACGCACAGCATGTCACAGCTGTACTACTGTGCCTCGTGCAACATGGGCTATCGCAGTCGGAAGTCTTTGCAGAAGCATTATAAGAATGCAATCGCTCATAAAGACAAAATgtaTAAATGCCAGCTCTGCGATAAGTCCTGCCCTACGCTGGTTTCTTTGGATGAGCATACTGCCTCGGTTCACGTCAGAAGCAAAGAACTCTTCTGCGCTGTTTGTCCAGCTAGATACTCTACTAGAAAGGGTTTATTGCGACACATGGGAAGTCACAAGAATGTAGGGCAAAAGAAACTGCCATTATGTCATGCTTGTGGTGAGAGCTTTAagagTACCAGTATACTAAGAAGACATTTGAAGAATATATGCGAAAAGAACAAAGAAGAGGAACTAATAATGTCTCGAGCACATTATTGA
Protein Sequence: MSSFLCFVCHSTVNADTNEDTRDKYREVIGMHLCPDSHLCFICCHFLNKMWLFKSICLKRSLEYPVLFSEKGTINLQRSDTQVSTLCPEDPCLQHLNSKYHFYNTIENSPQFEENRYVQLHEEMHFGLLPNNVEVQTDDLFEHFNDNLLKSTVEQFNNEFLGIKETRKEVDEFIFANDNIESPLENINKIELGNLEEISEVNITLTDLNVRNFDCKEFRNDYVDRNDLRSCFVEKQQYMRNNHFVEKCNQIVGTSDHFVGLVDRSHDCCVRNSFEVKLDTNNVFVERSDDYVVRNDDFIQERNQYVENENIINENNEYQEAPYSNDEINDKNDETKDNVDAQHIKLENNNNSDTNAETDDDNEDSTENNVHDDNDKSLENNDKNNEYIEIEIPKKNVFIKLTLSQEDQKIELEESRKSKKYIDAVYKCYSCAIGFLFKDSYQAHMMRHEESNGEHLCQICSLRFANPAVLRVHHANHLVRYQCTICEQILRSKQRLSHPCQRQTNQVPCHLCGKVFQSQSHHQQHLKRAHESSNRTYTCNVCGKRCKNQAAVRTHMLTHITRKFTCDLCPSTFSSPYTLKQHSKTHSMSQLYYCASCNMGYRSRKSLQKHYKNAIAHKDKMYKCQLCDKSCPTLVSLDEHTASVHVRSKELFCAVCPARYSTRKGLLRHMGSHKNVGQKKLPLCHACGESFKSTSILRRHLKNICEKNKEEELIMSRAHY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00704421;
90% Identity: -
80% Identity: -