Ecen009708.1
Basic Information
- Insect
- Eupithecia centaureata
- Gene Symbol
- -
- Assembly
- GCA_944548335.1
- Location
- CALYMU010000641.1:26055-65548[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.18 14 7.2 1.1 1 23 115 138 115 138 0.95 2 27 2 1.6e+02 3.9 0.3 2 14 151 163 150 173 0.78 3 27 0.0006 0.047 14.9 0.3 3 23 185 206 183 206 0.94 4 27 0.0036 0.28 12.5 1.2 1 23 254 276 254 276 0.97 5 27 0.76 60 5.2 0.1 3 23 284 304 282 304 0.91 6 27 0.015 1.2 10.5 2.9 3 23 310 330 308 330 0.97 7 27 0.07 5.5 8.4 0.0 1 23 336 359 336 359 0.94 8 27 0.033 2.6 9.4 1.2 1 23 439 462 439 462 0.90 9 27 0.028 2.2 9.7 0.8 1 23 495 518 495 518 0.96 10 27 0.1 8.1 7.9 0.4 2 21 531 550 531 555 0.93 11 27 0.011 0.87 10.9 0.0 3 23 565 586 563 586 0.95 12 27 0.021 1.6 10.1 1.2 1 23 643 666 643 666 0.95 13 27 1.2 97 4.5 0.4 3 11 684 692 682 696 0.84 14 27 8.3 6.5e+02 1.9 1.2 5 23 704 723 698 723 0.91 15 27 1.2 97 4.5 0.4 3 11 741 749 739 753 0.84 16 27 8.3 6.5e+02 1.9 1.2 5 23 761 780 755 780 0.91 17 27 0.004 0.32 12.3 1.2 3 23 798 818 796 818 0.89 18 27 0.011 0.83 11.0 2.4 1 23 824 846 824 846 0.92 19 27 1.2e-05 0.00094 20.3 0.1 2 22 852 872 852 872 0.95 20 27 0.0071 0.56 11.5 0.9 1 23 1154 1176 1154 1176 0.98 21 27 0.0036 0.28 12.5 0.6 2 23 1184 1206 1183 1206 0.96 22 27 0.0035 0.28 12.5 0.4 1 23 1237 1260 1237 1260 0.95 23 27 3.3 2.6e+02 3.2 1.0 1 21 1264 1284 1264 1287 0.80 24 27 0.54 43 5.6 0.2 2 23 1299 1321 1298 1321 0.94 25 27 0.0052 0.41 12.0 2.9 1 20 1327 1346 1327 1351 0.94 26 27 0.00012 0.0097 17.1 1.7 2 23 1377 1399 1377 1399 0.96 27 27 1.8 1.4e+02 4.0 0.3 2 22 1406 1426 1405 1429 0.88
Sequence Information
- Coding Sequence
- ATGGCTGCGAATAAGATATGCCGTATTTGCCTGCTCACCGACGTGCCACTACAAGAGATGGCTGATACCTATTTGGAGTACTTTGAAGAAATTTGCTCTTATAAGgactgtatCCAAGACATTATAGATATCCATCCAATAAGTTCACTACTCACCAGTGGTGCTTGTAATGTTGGGTCTGGACCAAGTGAACGAATGCGAGTGAAAAGTGAACGAGTTGGattcgacgatcggtcccgCGCGTTCGTTTTCTCTGTTGTGTACACACTAAACGAATGCATGAAAACCCCAGCTCACATGTCAACGTACCTGAACCACAAACGTAACTTCCACGAGAGCGGTCACGTGTGCGTCACGTGCGCGCGCACGTTCGTCTCTCAGCTCGGACTGTTGCATCACAGAGCGAGGGCGCaccagGCGAAGTCAGAGGAGCCATCTACAGACGGCGTACAATGTTCCCTATGTGATCTCACGTTCCCAAACCAGCGTGTCCACAACGTTCATGTACTTAACACGCACAAAAATACGAAAGAAGCCAAGGACATGATCGCGTGTCAGTATTGCGGCCTGACATTTGACGACGCAACTCAGTTGAAGGAGCACAAGAAACAGAGCCATCTAGCTGTTAAAAATGACATCGGCCCTAAGAAATGTGAGCTGTGCGGGGCGGAAGGCAACGGACGTGAATGGCAGCAGCAACACTTTAAAGCGGAACATCCTCACGTCAAATGTCAGAACGCGAGCGATGACGCGACGCAGCACATGTGCGATCAGTGCGGCAGGTTATTCAGTAGTATCTACGTACTCCGCGACCACTTAAACACGCACAGTGGCTTACGTCCATGGGCTTGCCGCTCATGCGGAGCCACCTTCAGCTCATACTcggcgcgcgcgcagcacgAAGTGAGGCACGGACCGGCCCTAGCCTGTCCGTACTGCCCCGCGCGCTTCCACAGCACCTCGGGGCTCTGTATGCATAAACGAAGACACGTAGGCGCGCGTACGCACGTGTGCGGTGTGTGCGGGCGCGCATTCCTGCTTGCGGCGCAGCTGCGGGAGCACGTGCGCGCCGTGCATcagcaccgccgccgccgccagccgCCAAGggaccgccgcgccccgcccgcgTACCACAAGCCAGTTGTAACCAGGATACAACTGACCGATGATGAGATTCGACGAGAGTTTGCCGCCAGAAAGACTTGTCCTAGATATTTGGAGGCGCCACACAAATGTGATATCTGCTACACAGTATACAAGTGCCAAAAGCTAGCTGAATTCCACATGAAGTGGCATCTTCCGTCAGCAGGTGAGTTTCCTTGCGACGTATGTGCTATGCGTTTCAAGTCTCATTCTGCGATGCGCAAACACAAGACTGATGTACATTTTGGAAGGTTCGCTTGCAAGAAATGTCCTCTCATCACTTAccacaaTCACAGCTCCACCTACATGTCTCACCTCCGCAAGTCGCATCGGACTGAGCATGTGTGTGTGACGTGCGCACAGACATTCGTATCCGAGAAAGGACTCACTGTGCATCGGAAGAAGGTCCATAATGCTTCTAGTAAGTTGGACGCTAACGGCACGGCTCGCTGCTCGCAGTGCGACCTCACGTTCGCGAACCAGCAAGTGTACACCGTGCATCTCATGAACACCGACAAGCACAAGGACAAGGCTGAGGCGCTTATAGCGTGTCCGGAATGTGGCATCCAGTTTCCGGACAAGCTGGCGGTGCGCGCGCATCGCCGCGAGACTCACCCGCAGTACAACTTCAGCGCGATGAAGCGGGCCGAGAGCGGGCAGCCACTGGGACATGTGTGTCCTTTGTTTCCGGACAAGCTGGCGGTGCGCGCGCATCGCCGCGAGACTCACCCGCAGTACAACTTCAGCGCGATGAAGCGGGCCGAGAGCGGGCAGCCACTGGGACATGTGTGTCCTTTGTGCGGTGCGTCAGGCACCCACAACACGTGGCTGTACCGTCACTTCCGCGCGACGCACCCCACACACAGCTACGAGCAGTGCGTCGCGAGCGAGCGGCGCAGGCATCTGTGTGACCAGTGCGGGAAGAGTTTCTACGTACGTAACTACCCTCACTATTGTATTATTGTTCAGTGCGGTGCGTCAGGCACCCACAACACGTGGCTGTACCGTCACTTCCGCGCGACGCACCCCACACACAGCTACGAGCAGTGCGTCGCGAGCGAGCGGCGCAGGCATCTGTGTGACCAGTGCGGGAAGAGTTTCTACGTACGTAACTACCCTCACTATTGTATTATTGTTCAGTGCGGTGCGTCAGGCACCCACAACACGTGGCTGTACCGTCACTTCCGCGCGACGCACCCCACACACAGCTACGAGCAGTGCGTCGCGAGCGAGCGGCGCAGGCATCTGTGTGACCAGTGCGGGAAGAGTTTCTACAATATAACGCAGCTGAAAGAGCATGCGTTTGCGCACGCGGGACTCAAACCGTTCCGATGCGACCAGTGTCCCGCTGCCTTTAGCTCCAAGTCACATCTCAAGTTTCATTCAGAGAGACACTCGCCGCCGCGCCGAGAATGCTCGGAATGCGGGAAGAAGTTCGTCAGTGCAGCCAACCTCTCCAACCATATGAGGgTATTTCTACAATCAGATGTCATATTCTGTTCCTTGTGTGAAGACTTGCTGAAAAACTTCTATGAATTTCGTTCAAAATGCCGCTATTCAAATGATCTTCTCAAACAGAATGTTCAGCAAAATCTGGAGAATTGTACATCATCTGATACACTACAAGATGATAACAATACACCTAAACAGCCCGAAGCCAAGCCACAAGAAAATAGCGAAACTAATGGGCTTGAAGAGAAGCAAACTGAAAATACTGAAACTAAATGGCCAGAGAATAAGTTCTCCCAGTCTGATGATAAACCGGTAATCAAAATAGAATGCACAGAAAACACCATTATAGACACTGATCTGAAACCAGAAAAAGAAGAAGATTTTTCATTTACAGAAATAGACAATAACTACTGTGGCATTGATCTCTTTAACgactttgatgatgatgaagaatatAAACCAGAGAAGAGCAAGAAAAAACATAGTAAAGAAAAGGTAAAAGAAAAGAATAAACACAGAAAAGAACGAAGAAAAAAGAATGATCTCAGCAAAGAAGATCCAGACAAAAATAAACTGAGAGATAGAATATTGCAGTTGTTAGAGCAGGATGAATTAAAAGATTTGGGTGAAGGGGTTGAAATTGATAAGGAACTATTCCTAAAGATATTTAATAAATCTAAAATTGGAAGGGTGCGGTaCACAAAAGACGAACTAGAACGGATAAAAAAGTTCCTTTTActcctttttaaaaataacaatccgGAGTATGAAGAGATGTTTGAAATCGAGATATTAGACACAGAAGAGCTTAAACTAAAAGAGTTTAATTCAAGGAAGTTTAGTAAGGAGTACTTGGAGGCGGAGTTCAAATGTGAAGTTTGTTATAAAGTGTTTGATGTGCAAAGGCTTTTGGACTATCATCGGAAGTGGCATGAGCCTACACCCGGCTCCGTATCATGCTCAATCTGCCTCATGCGGTTCGCGCGACGCAAGTCGCTCGCTCAACATTTGAAGTCCAACCACTGCGCAGTCTACCGCTGCACGCTATGCCCTCTGCTGACTTACAACTTTTCCGTGATGGTAAATCACTTCCACCATCATAAAGGGAAAGAATACCCATGTCCCGTGTGCTTGAGTGTCTTTAGCAATAAAAGCACAATGAACAACCATAGACTGCAGACACATAAGACCACGCATATCTGTCCTCTATGCGCGCGAAGCTTCGTCTCAGAAAAAGGATTGTACTTTCACAAACAACTCAAGCACAAgGATGAAGAGGCGAGCGTGCTATCGACGTGTTTCTGTAACACGTGCGGTGCTGAGCTGGGGTCTCCGCAGCTGTTGGCGGCTCATGTACGTCTAACGCACAGCGCGCTCACAATTCACAAATGTTTCCATTGCAAAGAAGTGTTCCGTACCCTGGAAGAGTTGCGGCAACATAAAGTGGCCAACAACCACCAGAGGGCGCCGCGGGTGGATCTCACGAAACCTCTGGATGACACGGTGGTACCATTGAACAACGACCAGAAGCCATATTGCTCGGAGTGTGACAAATCATTCAGCACGCGCAAGGGTTATCTGCGACATTACAATTCCAACCACAACGTGAACCGAATTCAGAAATGCGGTTTCTGCCAAGCTAAATTCACATCCACCGAAGCGATAGAAGCCCACAGAGTGACTTACAACCACCAGCCTAAAGTCCGCTACGTGAAGCGTCTCACCACCGCCAAGCCGGCGCGTGCTGACAGTTACACCAACTGTGAACTGCCTAAAGTCCGCTACGTGAAGCGTCTCACCACCGCCAAGCCGGCGCGCGCTGACAGTTACACCAACTGTGAACTGGTAAGCGATGAGACACACAGAGTGACTTACAACCACCAGCCTAAAGTCCGCTACCTGAAGCGTCTCACCACCGCCAAGCCGGCGCGTGCTGACAGTTACACCAACTGTGAACTGGTAAGCGATGAGACACACAGAGTGACTTACAACCACCAGCCTAAAGTCCGCTACCTGAAGCGTCTCACCACCGCCAAGCCGGCGCGCGCTGACAGTTACACCAACTGTGAACTGGTAAGCGATGAGACACACAGAGTGACTTACAACCACCAGCCTAAAGTCCGCTACCTGAAGCGTCTCACCACCGCCAAGCCGGCGCGCGCTGACAGTTACACCAACTGTGAACTGGTAAGCGCTGAGACACACAGAGTGACTTACAACCACCAGCCTAAAGTCCGCTACGTGAAGCGTCTCACCACCGCCAAGCCGACGCGCGCTGACAGTTACACCAACTGTGAACTGGTAAGCGATGAGACACACAGAGTGACTTACAACCACCAGCCTAAAGTCCGCTACGTGAAGCGTCTCACCACCGCCAAGCCGGCGCGCGCTGACAGTTACACCAACTGTGAACTGGTAAGCGATGAGACACACAGAGTGACTTACAACCACCAGCCTAAAGTCCGCTACGTGAAGCGTCTCACCACCGCCAAGCCGGCGCGCGCTGACAGTTACACCAACTGTGAACTGGTAAGCGATGAGACACACAGAGTGACTTACAACCACCAGCCTAAAGTCCGCTACGTGAAGCGTCTCACCACCGCCAAGCCGGCGCGCGCTGACAGTTACACCAACTGTGAACTGGTAAGCGATGAGACACACAGAGTGACTTACAACCACCAGCCTAAAGTCCGCTACGTGAAGCGTCTCACCACCGCCAAGCCGGCGCGCGCTGACAGTTACACCAACTGTGAACTGGTAAGCGATGAGACACACAGAGTGACTTACAACCACCAGCCTAAAGTCCGCTACGTGAAGCGTCTCACCACCGCCAAGCCGGCGCGCGCTGACAGTTACACCAACTGCGAACTGGACAATCGCTGGTGA
- Protein Sequence
- MAANKICRICLLTDVPLQEMADTYLEYFEEICSYKDCIQDIIDIHPISSLLTSGACNVGSGPSERMRVKSERVGFDDRSRAFVFSVVYTLNECMKTPAHMSTYLNHKRNFHESGHVCVTCARTFVSQLGLLHHRARAHQAKSEEPSTDGVQCSLCDLTFPNQRVHNVHVLNTHKNTKEAKDMIACQYCGLTFDDATQLKEHKKQSHLAVKNDIGPKKCELCGAEGNGREWQQQHFKAEHPHVKCQNASDDATQHMCDQCGRLFSSIYVLRDHLNTHSGLRPWACRSCGATFSSYSARAQHEVRHGPALACPYCPARFHSTSGLCMHKRRHVGARTHVCGVCGRAFLLAAQLREHVRAVHQHRRRRQPPRDRRAPPAYHKPVVTRIQLTDDEIRREFAARKTCPRYLEAPHKCDICYTVYKCQKLAEFHMKWHLPSAGEFPCDVCAMRFKSHSAMRKHKTDVHFGRFACKKCPLITYHNHSSTYMSHLRKSHRTEHVCVTCAQTFVSEKGLTVHRKKVHNASSKLDANGTARCSQCDLTFANQQVYTVHLMNTDKHKDKAEALIACPECGIQFPDKLAVRAHRRETHPQYNFSAMKRAESGQPLGHVCPLFPDKLAVRAHRRETHPQYNFSAMKRAESGQPLGHVCPLCGASGTHNTWLYRHFRATHPTHSYEQCVASERRRHLCDQCGKSFYVRNYPHYCIIVQCGASGTHNTWLYRHFRATHPTHSYEQCVASERRRHLCDQCGKSFYVRNYPHYCIIVQCGASGTHNTWLYRHFRATHPTHSYEQCVASERRRHLCDQCGKSFYNITQLKEHAFAHAGLKPFRCDQCPAAFSSKSHLKFHSERHSPPRRECSECGKKFVSAANLSNHMRVFLQSDVIFCSLCEDLLKNFYEFRSKCRYSNDLLKQNVQQNLENCTSSDTLQDDNNTPKQPEAKPQENSETNGLEEKQTENTETKWPENKFSQSDDKPVIKIECTENTIIDTDLKPEKEEDFSFTEIDNNYCGIDLFNDFDDDEEYKPEKSKKKHSKEKVKEKNKHRKERRKKNDLSKEDPDKNKLRDRILQLLEQDELKDLGEGVEIDKELFLKIFNKSKIGRVRYTKDELERIKKFLLLLFKNNNPEYEEMFEIEILDTEELKLKEFNSRKFSKEYLEAEFKCEVCYKVFDVQRLLDYHRKWHEPTPGSVSCSICLMRFARRKSLAQHLKSNHCAVYRCTLCPLLTYNFSVMVNHFHHHKGKEYPCPVCLSVFSNKSTMNNHRLQTHKTTHICPLCARSFVSEKGLYFHKQLKHKDEEASVLSTCFCNTCGAELGSPQLLAAHVRLTHSALTIHKCFHCKEVFRTLEELRQHKVANNHQRAPRVDLTKPLDDTVVPLNNDQKPYCSECDKSFSTRKGYLRHYNSNHNVNRIQKCGFCQAKFTSTEAIEAHRVTYNHQPKVRYVKRLTTAKPARADSYTNCELPKVRYVKRLTTAKPARADSYTNCELVSDETHRVTYNHQPKVRYLKRLTTAKPARADSYTNCELVSDETHRVTYNHQPKVRYLKRLTTAKPARADSYTNCELVSDETHRVTYNHQPKVRYLKRLTTAKPARADSYTNCELVSAETHRVTYNHQPKVRYVKRLTTAKPTRADSYTNCELVSDETHRVTYNHQPKVRYVKRLTTAKPARADSYTNCELVSDETHRVTYNHQPKVRYVKRLTTAKPARADSYTNCELVSDETHRVTYNHQPKVRYVKRLTTAKPARADSYTNCELVSDETHRVTYNHQPKVRYVKRLTTAKPARADSYTNCELVSDETHRVTYNHQPKVRYVKRLTTAKPARADSYTNCELDNRW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -