Basic Information

Insect: Eupithecia centaureata
Gene Symbol: -
Assembly: GCA_944548335.1
Location: CALYMU010000932.1:104318-109603[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.029 2.3 9.6 3.6 2 23 72 93 71 93 0.96

2 12 0.0053 0.42 11.9 1.1 2 23 100 122 99 122 0.96

3 12 0.2 16 7.0 0.1 2 23 130 152 129 152 0.88

4 12 0.0031 0.25 12.7 2.1 1 19 158 176 158 178 0.95

5 12 1.1e-06 8.7e-05 23.5 2.6 1 23 186 208 186 208 0.96

6 12 0.0011 0.083 14.2 0.2 1 22 214 235 214 235 0.95

7 12 0.0079 0.62 11.4 1.8 3 19 255 271 254 276 0.92

8 12 2.9e-05 0.0023 19.1 1.9 1 23 563 585 563 585 0.98

9 12 7.2e-06 0.00057 21.0 1.3 1 23 592 615 592 615 0.98

10 12 0.0066 0.52 11.7 3.2 1 22 623 644 623 646 0.88

11 12 0.12 9.2 7.7 2.9 1 23 652 676 652 676 0.98

12 12 1.6e-06 0.00012 23.1 1.9 1 21 682 702 682 703 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.029	2.3	9.6	3.6	2	23	72	93	71	93	0.96
2	12	0.0053	0.42	11.9	1.1	2	23	100	122	99	122	0.96
3	12	0.2	16	7.0	0.1	2	23	130	152	129	152	0.88
4	12	0.0031	0.25	12.7	2.1	1	19	158	176	158	178	0.95
5	12	1.1e-06	8.7e-05	23.5	2.6	1	23	186	208	186	208	0.96
6	12	0.0011	0.083	14.2	0.2	1	22	214	235	214	235	0.95
7	12	0.0079	0.62	11.4	1.8	3	19	255	271	254	276	0.92
8	12	2.9e-05	0.0023	19.1	1.9	1	23	563	585	563	585	0.98
9	12	7.2e-06	0.00057	21.0	1.3	1	23	592	615	592	615	0.98
10	12	0.0066	0.52	11.7	3.2	1	22	623	644	623	646	0.88
11	12	0.12	9.2	7.7	2.9	1	23	652	676	652	676	0.98
12	12	1.6e-06	0.00012	23.1	1.9	1	21	682	702	682	703	0.94

Sequence Information

Coding Sequence: ATGGATTCAAATTTATCCTATTTCAGTCTACCATTTGTAGACGTTCAAGACCTAGATTTTGGTAAGATCAGGGGTCATGACTGTGAATACGATGATCTGCACCCTACGTTGCCTCACGGGGCACTGCTGGGCGCTGACGATGATGTCCTGGCCCAGTTTCTATCGGGTGATGACCCTTTGGAAGAACCCGACCTGAATGGGCCTACTACACTACATTGTGAGATTTGTAGAAAGCATTTTGATAATGCTAAGAAGTACTACGGGCATTTGAGAGTGCATTCTAAGGATAATCTCTGGAAATGTGATAAATGCCCCGAGGAGAAGTTCTCAACGAAGCAGCAGCTGATGAAGCACAGTCTGACGCACCAGCCGCTGGAGAGAGTGTGGAGATGTCCTCAGTGTGAGATGTCCTTCGAGGCTCTGTGGAGGCTGCAGCAGCACCTGTTCGCTAAACACTTGGATTACAGACCACACAAATGTGAAGTGTGTCCTAAAACATTTCACAAGCTATCAGACTTGGACAAGCATAAGGATTGTCATGCAGCTGTGAAGAAACATGCCTGCACTATTTGCGCAAGGAAATTTACTGATAAATCCAACTTGAAGAGGCACATGCTTAGCCACGGAGATGAGAAGGCCTACCCTTGTGCTGGCTGCGGACATCGGTATAAACAGATAGCCTCATTGCAAAGCCACATCAAGAAATGCTCAATGGTTCAGAAGAACCCGGCAGAACCAAAGAAGTCCTATCGGAACAACTACTGCAGGGTTTGCGGAATGACGTTCAAGTATAAGAGCTCTCTGTTGGAGCATTGTGTCAGAGAGCATTCAAATAACCCGTCCCTACCACCCCCCGAACCGCCAAAAGAAGACAAGTCCAACCAACTTCACGTCGACACAAACCGAACTGTCGACAAAATAGTCGACGATATCCTTTCAGCTGAAGACGACTACATGACGATGTCGACACAAAATGAACTTATAAACTACCCTGAAGTCAATCAACTGAACCAAGACAACCTTATGCAGATCGAGTTGCTCAAAGAAATGAACCAAATGCACAATATAAATGAAAACGACATTTATGATGATGAGCTACTATACAACGATATAGACATTGATAGCTTTCAAACCTTGTGCAATAATATCGACTGTGAACGTAACGATCTCTTCGATCTGAACGACGCTAGAAGTATAGATCATATCATGAACGGAAAGAGCCTGGATCAGGATTTAATGAACGCGTTAGTTCGAGGAATCGATCAGGTTAAAGATGATATACCGAAAGAGTATCTTAACCCACCAGAAGTAAACGTTAAAGTCAATGAATATCTGAATCCGCCGGTTTCAGTCAATGATTGCTCGACGATCTTCGAAAGCGATGTTGATTTAGAAGCTAGTACGAACTTAGCTGCAAACCTAAATCAGCTTATAGGAGAAAATAGCGTTCAGTACATATCAACAGAACACGATGATACGTTCATAATAAGTTTGAACAGTGAGATTGATGCTGAACAACTAACAGATATGCTAAACATAGGTATGGAGAACAAACCATTCAGGACTGGAGATTATCCTAAACAAACtgaagttattaataaagacttaAATAATGAACAAGAGGTTAAAGCGGAAAAAGCACCTGAAAAGGTTAAGCCCGAAAAGAAAGTCAGAAGGAAAACAAAGTATGTCTGTTTGAAGTGTAAGAAAGTTTTTAAAACGAAGGATAACTACGTTTCGCATCGTGGGACCCACGACTCAGACGCCAAAGAATTCGAATGTGAAATTTGCTTAGAACGATTCAGTTACAAATCCTCTCTCAACAAGCACACACGTAAAGCGCACACGCCTTTTGTTAAAACTCAGCATAATTGCTTCGTTTGTAATAAAAACTATGAGACTGCGTATCAGCTAAAGAAACACAAAGTCCTTAAGCACAAGCTAAACCATCCGTACCAATGCGATGTAAAAAACTGTGAAAAGAAATGCTTTTCTAAATGGGATCTAGACAttcataaaaaATCTCACAGTGAAGAAAAACCTTACGCCTGTGATATCTGTAGCAAAACTTTTAAAACGCGCTCCCATCTCACAAGACATGTCAAAAAGGTGGATTGTACTAAacagtaa
Protein Sequence: MDSNLSYFSLPFVDVQDLDFGKIRGHDCEYDDLHPTLPHGALLGADDDVLAQFLSGDDPLEEPDLNGPTTLHCEICRKHFDNAKKYYGHLRVHSKDNLWKCDKCPEEKFSTKQQLMKHSLTHQPLERVWRCPQCEMSFEALWRLQQHLFAKHLDYRPHKCEVCPKTFHKLSDLDKHKDCHAAVKKHACTICARKFTDKSNLKRHMLSHGDEKAYPCAGCGHRYKQIASLQSHIKKCSMVQKNPAEPKKSYRNNYCRVCGMTFKYKSSLLEHCVREHSNNPSLPPPEPPKEDKSNQLHVDTNRTVDKIVDDILSAEDDYMTMSTQNELINYPEVNQLNQDNLMQIELLKEMNQMHNINENDIYDDELLYNDIDIDSFQTLCNNIDCERNDLFDLNDARSIDHIMNGKSLDQDLMNALVRGIDQVKDDIPKEYLNPPEVNVKVNEYLNPPVSVNDCSTIFESDVDLEASTNLAANLNQLIGENSVQYISTEHDDTFIISLNSEIDAEQLTDMLNIGMENKPFRTGDYPKQTEVINKDLNNEQEVKAEKAPEKVKPEKKVRRKTKYVCLKCKKVFKTKDNYVSHRGTHDSDAKEFECEICLERFSYKSSLNKHTRKAHTPFVKTQHNCFVCNKNYETAYQLKKHKVLKHKLNHPYQCDVKNCEKKCFSKWDLDIHKKSHSEEKPYACDICSKTFKTRSHLTRHVKKVDCTKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00698567;
90% Identity: iTF_00698567;
80% Identity: -