Basic Information

Insect: Eupithecia centaureata
Gene Symbol: -
Assembly: GCA_944548335.1
Location: CALYMU010000811.1:852875-867062[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.018 1.4 10.3 0.1 1 23 272 295 272 295 0.93

2 20 9.1 7.2e+02 1.8 0.2 5 23 325 344 321 344 0.85

3 20 0.00036 0.029 15.6 3.3 1 23 366 388 366 388 0.98

4 20 0.00059 0.047 14.9 1.2 1 23 392 414 392 414 0.98

5 20 0.11 8.6 7.8 2.4 1 23 420 443 420 443 0.85

6 20 0.5 39 5.7 3.6 1 23 450 473 450 473 0.90

7 20 8.3e-05 0.0066 17.6 3.2 2 23 481 503 480 503 0.96

8 20 3.8e-05 0.003 18.7 2.3 1 23 509 531 509 531 0.99

9 20 1.6e-07 1.3e-05 26.2 1.8 1 23 537 559 537 559 0.98

10 20 0.36 29 6.2 0.2 3 23 616 637 614 637 0.91

11 20 1.3 1e+02 4.4 5.4 1 23 804 827 804 827 0.94

12 20 1.2 96 4.5 0.1 2 23 854 878 853 878 0.91

13 20 3.3 2.6e+02 3.2 4.2 1 23 900 922 900 922 0.97

14 20 1 81 4.8 0.3 1 23 926 949 926 949 0.88

15 20 0.00023 0.018 16.3 1.9 1 23 955 977 955 977 0.98

16 20 0.033 2.6 9.5 3.7 1 23 983 1006 983 1006 0.96

17 20 0.005 0.39 12.0 0.1 2 23 1014 1036 1013 1036 0.96

18 20 0.00017 0.013 16.7 2.9 1 23 1042 1064 1042 1064 0.97

19 20 5.6e-07 4.4e-05 24.5 0.5 2 23 1071 1092 1070 1092 0.97

20 20 0.05 3.9 8.9 4.0 1 23 1098 1121 1098 1121 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.018	1.4	10.3	0.1	1	23	272	295	272	295	0.93
2	20	9.1	7.2e+02	1.8	0.2	5	23	325	344	321	344	0.85
3	20	0.00036	0.029	15.6	3.3	1	23	366	388	366	388	0.98
4	20	0.00059	0.047	14.9	1.2	1	23	392	414	392	414	0.98
5	20	0.11	8.6	7.8	2.4	1	23	420	443	420	443	0.85
6	20	0.5	39	5.7	3.6	1	23	450	473	450	473	0.90
7	20	8.3e-05	0.0066	17.6	3.2	2	23	481	503	480	503	0.96
8	20	3.8e-05	0.003	18.7	2.3	1	23	509	531	509	531	0.99
9	20	1.6e-07	1.3e-05	26.2	1.8	1	23	537	559	537	559	0.98
10	20	0.36	29	6.2	0.2	3	23	616	637	614	637	0.91
11	20	1.3	1e+02	4.4	5.4	1	23	804	827	804	827	0.94
12	20	1.2	96	4.5	0.1	2	23	854	878	853	878	0.91
13	20	3.3	2.6e+02	3.2	4.2	1	23	900	922	900	922	0.97
14	20	1	81	4.8	0.3	1	23	926	949	926	949	0.88
15	20	0.00023	0.018	16.3	1.9	1	23	955	977	955	977	0.98
16	20	0.033	2.6	9.5	3.7	1	23	983	1006	983	1006	0.96
17	20	0.005	0.39	12.0	0.1	2	23	1014	1036	1013	1036	0.96
18	20	0.00017	0.013	16.7	2.9	1	23	1042	1064	1042	1064	0.97
19	20	5.6e-07	4.4e-05	24.5	0.5	2	23	1071	1092	1070	1092	0.97
20	20	0.05	3.9	8.9	4.0	1	23	1098	1121	1098	1121	0.98

Sequence Information

Coding Sequence: ATGATCGTAAATGGTGATAAAAAACGAGAGGCAATATGCAGTAAAAAATCTTCGATTGTCGGACGAGACGattcaattaaaaaagaaaattgttcaCCTTATTCTTCATCGAAAAATAGTAAGAAAAGGTCTAGAAAAGATGATGACGATAACAATCAAGTCCAGGATAATAAACGTTCCAAAAAAGATCATAATAACGTCGAAGAAAAGTCAAAAAGCAAGGAACGGTGTAAGAAAGATACAAATAAACTTGACAACAGGTCTACAAAACACGAAAAATCCAAGAAAGATACAAGTATTATGGTTGAACATAGTTCCAAAAGTAAGGAAAGATCTAAGAAAGATACAAATACTGAGAATAAGTCTAAGAGCAGGGAAAGATCCAGGAGCCGTGGCCCTGTTGAGAAAAAGATTAAGTTTTTCAGACCTTTCCTCGATGAAGATGACGACTTTGAAAAGAAAGGTGAGAGATCTAAAAGTAGAGAAAGGCCAAATAAAAGTGAGGCTGGAGAATCTTCATCTTCTTACAAGAATAAAGGTGAGAGCAAGAATGCACCAAAAGAACGTAGCAATAAAGCCAAGATCGACAAaatcaaaaaaacaaataagaaagaTGATGATACTGATAAATTAAAGACACTGGCGAGAACAGTCAAACCAAAGCAAACAAGTAGCGCTATCAAAACGCGGACTGAAAAAGGCGGTGTATTGCTTGAGATCCAACCAACAGAGATCGAAAAACATCTACACAATATACGGACGATACTACTGAATTCTAACGCAACTCCTATACAAAACCATAACGAAACAGGCTTCACTTGCGGCTTCTGCGTTGAACAATTCATTACAGCCGCTGATCTTAAAACGCACACGCTCGACGAACACGATGATGACTACATCGAGAGATTTATGGTTAGAAGTAACCCATTTAGCTATGTCGTCAAATTAGACATAACCTCACTCCGCTGCATTTTGTGCACTCGGAAAATATTCACTCTAGAAAACCTCATTGAACATCTAGAGATCAAACACAACAAACAGTTCTACAAGGATATAAAAAATCACATCCTCCCTTTCAAATTCCAAAGCGATGTATTTACTTGCGTTATTTGCGATCGCAGGTTCGATCGCTTTAAGCAAATGCAACATCACATGAGCGTGCATTACAAGAACTATATATGTGACGAATGCAACTCGCCTTTTATCAACAAAGCTACCCTCAGAACTCATCTACACAGACATACGGAACTTTTTGCGTTCGCTTGCGATTTCTGTGGAAAAACATTCGATACCAAGATCAAATGTACAGTCCACGAGAATTATGTACATATGATCTTCCATAAACGCCACAAATGCACCTACTGTTCGGAATACTTTGTGCATTACGTAGCGAAAATGAGACATATGGTTGATCGGCACGGCCACAAACAGCGCATAGTAAAATGCAATACTTGCGACAAGATTTTCAAAACCAAGGAGAAGCTTACAAAGCATAACAAAAGATACCATCTCTTAGAGAAAAACTACAAATGCGATCAGTGCGACGGCCGTTTCTTTGATAGCTACGATCTGAACCGTCACAAACGCACCCACGGGAATTTAAGGCCGTTCGAATGCAAAACCTGCGATAAGAAATTCACTAGAAATGATAATTTGTTGGAGCACATGCGTCTACACACTCAGGAGTTTAGAAAGTATACATGTGATCAAGAAGATGCTAAAGGATATCCAAAATTCAACAGACCTGATCCAGAAGAAATGGAAATGCAGAAGCACAATGCTAAACAGATATTGCTGTACTCAAACGCGACGCCACTTTCGCGACATACAGATTTAGGGTACGGCTGCGTTTTCTGCCCTGAATACTATCAAAAACCTTCCGATCTTAAGAACCATACACTAGATTACCACGATATAAACACTAGAGCTGAGTATATGACTAAACCACGGTTTGGATCAGGAAGTTACATTGTCAAACTTGACGTAACAAACTTAAAATGTACTCTATGCGAGCAAGAAATCGAATACGTAGGTGTTAAGGAACATCTTGTAGACCATGGAAAACATATGCACGACCTTTCAAAAACTTACACAGTGCCGTTCAAATTTGACGACGATATACTCAAGTgtGTCCTCACAGACTACAAACCCATAAAACTGGAAGTTGAATGGGATTTAGAAAAAAGCTTGGAAATTTCAAGTATTAAAGAAGAGAGTTCATCTTCCGATGATAAAAAGAAAAGAGGTAAACGCGGGAAGAAGAGAAAAGTCGATGACTTCCGAAAACTTAAGATTAAACCACCAGCCAAAGCTGAAGTTCTAGACGTGGAAAAACATAGATATAACGTTCGGGCTATTTTACAATACTCCAATGCGACGCCGATCAGAGCGCACTATGCAGGGAACGGATACGCTTGCTGCTTCTGCAAGCAATACTTCCACAAAGCATCAGAACTGAAGGAGCATACGCTACAATCCCACGACGAACAAACCAAAAAGAAATACATGCAGAAAGCTTTCCTTTTCAAACTATTTGTCAAACTTGATATAACACTTCTTCGCTGTACAGTTTGCTCAACGGATATTATATTTGATACTCTCGAACAACTCATAGATCATTTGAACTCGGTACATCAGAAAGGAATTCATACGGACATTAAAAATCAAATCATGTGTTTTAAGTTAGATGAGGAAGTATTTCGGTGTTTCATATGTACAGTTGAATATCACAgctttaaaaatttacttgaACATGCACATTCGCATTATAGGAACTTTATATGCGAGACATGCGATGCTGGCTTTATAAACAGACTTAAATTATACGGACACGTCTACAACAAGCATAAAGGCGCTGGTGCGCATAAGTGCAACACTTGCGAGAAAATATTCGATACtcccataaaattaaaaacccaCGAAAGAATACATTTAGGTACAGTTCTATACAAATGCCACGAATGCAACGACAAATTCTCGAAGAAGAAAGAGAAGAGAGATCACATGATAAACGTACACGGAGCTAAATTCGCTAGGATACAATGCACTGCTTGCGACAAACTGTTTATAAGCAAAGCTTCGCTCAGTGTCCACGTAAATAGAGACCACTTGATGGATAGGCGACATCAATGCGAACTTTGCGAAAAGACCTTCTTCACGTCATCGTTCTTGAGGGATCACATGGTATCTCATTCTAGGATTAGAGAGATCCAATGCGACGAATGTCCGAAAACATTTGCGAGAAAGAAAGCTCTACGTGAGCATATGAAATCGCATACTGGTGATCGTAGGTTCAAGTGTACGTTTTGTGACATGGCTTTTCTGCAAAAGTGTAGCTTGAAAGGGCATTTAAGAAGTCGCCACGATGCTGAACTGCCATGA
Protein Sequence: MIVNGDKKREAICSKKSSIVGRDDSIKKENCSPYSSSKNSKKRSRKDDDDNNQVQDNKRSKKDHNNVEEKSKSKERCKKDTNKLDNRSTKHEKSKKDTSIMVEHSSKSKERSKKDTNTENKSKSRERSRSRGPVEKKIKFFRPFLDEDDDFEKKGERSKSRERPNKSEAGESSSSYKNKGESKNAPKERSNKAKIDKIKKTNKKDDDTDKLKTLARTVKPKQTSSAIKTRTEKGGVLLEIQPTEIEKHLHNIRTILLNSNATPIQNHNETGFTCGFCVEQFITAADLKTHTLDEHDDDYIERFMVRSNPFSYVVKLDITSLRCILCTRKIFTLENLIEHLEIKHNKQFYKDIKNHILPFKFQSDVFTCVICDRRFDRFKQMQHHMSVHYKNYICDECNSPFINKATLRTHLHRHTELFAFACDFCGKTFDTKIKCTVHENYVHMIFHKRHKCTYCSEYFVHYVAKMRHMVDRHGHKQRIVKCNTCDKIFKTKEKLTKHNKRYHLLEKNYKCDQCDGRFFDSYDLNRHKRTHGNLRPFECKTCDKKFTRNDNLLEHMRLHTQEFRKYTCDQEDAKGYPKFNRPDPEEMEMQKHNAKQILLYSNATPLSRHTDLGYGCVFCPEYYQKPSDLKNHTLDYHDINTRAEYMTKPRFGSGSYIVKLDVTNLKCTLCEQEIEYVGVKEHLVDHGKHMHDLSKTYTVPFKFDDDILKCVLTDYKPIKLEVEWDLEKSLEISSIKEESSSSDDKKKRGKRGKKRKVDDFRKLKIKPPAKAEVLDVEKHRYNVRAILQYSNATPIRAHYAGNGYACCFCKQYFHKASELKEHTLQSHDEQTKKKYMQKAFLFKLFVKLDITLLRCTVCSTDIIFDTLEQLIDHLNSVHQKGIHTDIKNQIMCFKLDEEVFRCFICTVEYHSFKNLLEHAHSHYRNFICETCDAGFINRLKLYGHVYNKHKGAGAHKCNTCEKIFDTPIKLKTHERIHLGTVLYKCHECNDKFSKKKEKRDHMINVHGAKFARIQCTACDKLFISKASLSVHVNRDHLMDRRHQCELCEKTFFTSSFLRDHMVSHSRIREIQCDECPKTFARKKALREHMKSHTGDRRFKCTFCDMAFLQKCSLKGHLRSRHDAELP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -