Basic Information

Insect: Eupithecia centaureata
Gene Symbol: -
Assembly: GCA_944548335.1
Location: CALYMU010001323.1:146253-149592[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0015 0.12 13.7 0.9 1 23 79 101 79 101 0.98

2 12 2.9e-07 2.3e-05 25.3 2.1 1 23 131 153 131 153 0.98

3 12 0.00088 0.069 14.4 0.4 1 23 225 247 225 247 0.96

4 12 2.8e-05 0.0022 19.1 3.8 1 23 251 273 251 273 0.98

5 12 7.2e-06 0.00057 21.0 3.1 1 23 279 301 279 301 0.98

6 12 0.00028 0.022 16.0 0.5 1 23 307 329 307 329 0.97

7 12 0.026 2 9.8 3.5 1 23 336 358 336 358 0.97

8 12 2.2e-06 0.00018 22.6 2.3 3 23 366 386 364 386 0.96

9 12 3.4e-07 2.7e-05 25.1 1.1 1 23 392 414 392 414 0.97

10 12 1.3e-07 9.9e-06 26.5 1.6 1 23 420 442 420 442 0.98

11 12 6.8e-05 0.0054 17.9 2.4 1 23 448 471 448 471 0.98

12 12 6.6e-08 5.2e-06 27.4 4.1 1 23 476 498 476 498 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0015	0.12	13.7	0.9	1	23	79	101	79	101	0.98
2	12	2.9e-07	2.3e-05	25.3	2.1	1	23	131	153	131	153	0.98
3	12	0.00088	0.069	14.4	0.4	1	23	225	247	225	247	0.96
4	12	2.8e-05	0.0022	19.1	3.8	1	23	251	273	251	273	0.98
5	12	7.2e-06	0.00057	21.0	3.1	1	23	279	301	279	301	0.98
6	12	0.00028	0.022	16.0	0.5	1	23	307	329	307	329	0.97
7	12	0.026	2	9.8	3.5	1	23	336	358	336	358	0.97
8	12	2.2e-06	0.00018	22.6	2.3	3	23	366	386	364	386	0.96
9	12	3.4e-07	2.7e-05	25.1	1.1	1	23	392	414	392	414	0.97
10	12	1.3e-07	9.9e-06	26.5	1.6	1	23	420	442	420	442	0.98
11	12	6.8e-05	0.0054	17.9	2.4	1	23	448	471	448	471	0.98
12	12	6.6e-08	5.2e-06	27.4	4.1	1	23	476	498	476	498	0.99

Sequence Information

Coding Sequence: ATGGCACAGAAATCTATTGGCATACTTACAGATATCAAGAAAAAAGGTTTAGAGGTTACTCCTGAAACATGCCTGACTTTCAACATTCAACCGGTTGAAAATTTATCCATAGTTAACATTAGATCAATATCAATAGATTCCAAAACCGCTGATGTTACATGTCTTGAATCAAAAGTTAAAGAAGAATCACTAGCAGACCGATTCGTAAAGGTAGGAAGTAGAGAAATCGCGTCACACACTTGCGATAAATGCCCAAGTTCATTTGCAATAAAAAGTGATTTAGATGATCATTTGAAAAGCCATAGTGATAGCTTTGATTCCAATCAGACTGACATGAAGGCCATACATGATCGCTATCTAAGCTTACTCACTCAAATTCACACAGAACAGTTCCAGTGTGACGTATGTGATAAGCCTTTTTGCAATAAAGAGAATCTGAAAATACATCTCACAACACATTTTGACGAAACATCAGCGGATAAAATAGAATCTTATAGAGAAAACTCATTAAATAGTGACACCTATTCCCAGTCCTTCACAGAAAATGAGAACTCAATGGAACATTGTGAAACTAATGAACTGGAACCAGATAAAGAAGAACTAATACTCGAAATTGACGAAAATTTAGACCATATACCAAATGATATAGAGGAggatatcaaaaataaaaaatacgcatGCTATCAGTGTCCCGAGTACTTCGACAAGAGAGACGATTTAGAAAAACACTTAGAATACCACGAGAAAGGATTCCCCTGTACACAGTGCAGCAAAACTTTTCCAGACCACTATAAATTACGATACCATATCAAAACACATACAATGGACAAACCATTTATGTGCGAACACTGTCAAAAAGCATTCTCCCTGAAGGTCTACTTAAATAGACACATGAAACTTCACGCAGAGAATAAACCTTATGCATGCGCAGACTGTGATCGCACATTCGCATTCAGAAACAGTTTTCTCCAACATGTACAAAGTCATAACGAAAAGATCTACACGCATACGTGTGACCGCTGTGCGAAATCGTTTAGTGATATCAAGAGTCTCAAATGTCATATGGCGGTGCATTCAGGGGTGAAACCACATCTATGCACAGTTTGCGGAAGACGGTTTATAAGGAACTTTCAGTTGAAGGAGCATATGAGGGTACATACCGGTGAGAAACCTTTCGCTTGCAACATGTGTGGGAAGACCTTTACTCAGGCTAGTTCGCTGAATTTACATAAAAAGAGTCACACCAGCTTCCGTCCTTTTGTCTGCGAGGTCTGCTCTAAGACGTTTAACAACAAATACAGTCTGCAGAAGCACCTCCGCATTCACACGGGAGAAAGGCCCTATCAATGCACTGCCTGTGAGCAGAGGTTTACTTATAACAGTGGTTTACATGAACATATGCGCagattacaCAATGAAGGGAACTTCACTTGTGATATATGTTCCAAGACATTTATTAGAAACAGTCATTTGCAGCGCCATTTGAAGACTCATCTCATAGTAGTAGAGTAG
Protein Sequence: MAQKSIGILTDIKKKGLEVTPETCLTFNIQPVENLSIVNIRSISIDSKTADVTCLESKVKEESLADRFVKVGSREIASHTCDKCPSSFAIKSDLDDHLKSHSDSFDSNQTDMKAIHDRYLSLLTQIHTEQFQCDVCDKPFCNKENLKIHLTTHFDETSADKIESYRENSLNSDTYSQSFTENENSMEHCETNELEPDKEELILEIDENLDHIPNDIEEDIKNKKYACYQCPEYFDKRDDLEKHLEYHEKGFPCTQCSKTFPDHYKLRYHIKTHTMDKPFMCEHCQKAFSLKVYLNRHMKLHAENKPYACADCDRTFAFRNSFLQHVQSHNEKIYTHTCDRCAKSFSDIKSLKCHMAVHSGVKPHLCTVCGRRFIRNFQLKEHMRVHTGEKPFACNMCGKTFTQASSLNLHKKSHTSFRPFVCEVCSKTFNNKYSLQKHLRIHTGERPYQCTACEQRFTYNSGLHEHMRRLHNEGNFTCDICSKTFIRNSHLQRHLKTHLIVVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -